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CAN33_54590-T1, CAN33_54590-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54590-T1
Unique NameCAN33_54590-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2928351..2929627+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54590-T1 ID=CAN33_54590-T1|Name=CAN33_54590-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1277bp|location=Sequence derived from alignment at NKJJ01000020.1:2928351..2929627+ (Aspergillus niger FDAARGOS_311)
ATGGCTGGATTTGCCGACTTTGACGCCGGTCATCGAGACCTAGTCTCGGT
CACCAAATTCAATTTTTACGGCAATCGCATTGTCACGGCTTCAACTGATC
ACCGCATGAAGGTCTGGGACCAGAAAGACGGTGAATGGCAGCTCGTAGAT
ACTTGGCGTGCCCATGACGCGGAGATCCGTGATGTAAGCACTCCCCACGG
CAGTGGCCCCTTATTTCTTGGTATCTGGTCTGGTATCGTTTGGTTTTAAC
TGTTACTCAGGCGACCTGGAATGGCCCTTTCACGGGCCAGCACATTGGTA
GCGTGGGCGAAGACATGAAATGCAAGATATGGCAGGAGGATGTTACGCAA
CCCCCCAATTCAGGCCGGCGTTTCAGGTCCATCTTTCGCATGACCGCCCC
TCAGCGCCACCCATTTGTATCAATCGATTTTCGCAACATTGATCTGGAAT
CTTGGATGGCCGTTATTACTCGCGACGGCTACCTGATGATCATGGAGCCT
GTAAGTCCCGACACTCTTGCGGACTGGCAGCCGTTAGATCAGTTTAGAGT
CTGCACTGCTCCTCAGCGAGGAGAAGAAACAAGCTTCAAAGTGCAGTTCC
ATCATGATCCTTCGGACATCACGCATTCTGTATTGCCCTCTTCAGATCGC
AAAAGTTTGTCGCTGGTGGTAGCCGCCATGGACAGCGTAAAGATCTATCG
CACTGATGCCAGTCGACGTTTTTACCATGCCATCGAACTGACGGGACATG
GTGGTCTTGTGAGAGACATCTCTTGGGCCAATGGGTCAGTGAGGGGATAT
GACCTCATTGCTAGTGGCTGCAAGGATGGCTTCATCCGGGTTTTCGAGGT
ATATACCACGGCCTCTGGCTCTGGGTCACAAACTTCCAATGGCAACCACG
CACATTCTTCATCGCAGTCATCATCAATTCGTGCGACCACCCAGTCAGGT
ATCGGCTCTGCCCTTGCAAGCCGTGCTCCTGTGTCGATGTCCAGTCGTGC
CGCGCCCGCAGATTCACAGTTCAAGCATTCGTTCAAGGAAATAGCATGCA
TTGACAGCAAGCACCTAGACGTGTGGCAAGTTGGCTTCTCATACGCTGGT
TAGTAGCGGACCCCTTTCGCAGTGAAACGTCTTGAGAATCTGCCTTCGGT
GCTAATCAGTCTCTACACAGGTGACTGCCTTATTTCCTCAGGCGACGATG
GTATTGTACGATTCTGGAAGAAGTCCATCTCTGGAGAATGGCTCGAGTAC
GCTGAAACCGATATGGCTTGCCAATAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2928351..2929627+

>CAN33_54590-T1 ID=CAN33_54590-T1|Name=CAN33_54590-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3384bp|location=Sequence derived from alignment at NKJJ01000020.1:2928351..2929627+ (Aspergillus niger FDAARGOS_311)
ATGGCTGGATTTGCCGACTTTGACGCCGGTCATCGAGACCTAGTCTCGGT
CACCAAATTCAATTTTTACGGCAATCGCATTGTCACGGCTTCAACTGATC
ACCGCATGAAGGTCTGGGACCAGAAAGACGGTGAATGGCAGCTCGTAGAT
ACTTGGCGTGCCCATGACGCGGAGATCCGTGATGCGACCTGGAATGGCCC
TTTCACGGGCCAGCACATTGGTAGCGTGGGCGAAGACATGAAATGCAAGA
TATGGCAGGAGGATGTTACGCAACCCCCCAATTCAGGCCGGCGTTTCAGG
TCCATCTTTCGCATGACCGCCCCTCAGCGCCACCCATTTGTATCAATCGA
TTTTCGCAACATTGATCTGGAATCTTGGATGGCCGTTATTACTCGCGACG
GCTACCTGATGATCATGGAGCCTGTAAGTCCCGACACTCTTGCGGACTGG
CAGCCGTTAGATCAGTTTAGAGTCTGCACTGCTCCTCAGCGAGGAGAAGA
AACAAGCTTCAAAGTGCAGTTCCATCATGATCCTTCGGACATCACGCATT
CTGTATTGCCCTCTTCAGATCGCAAAAGTTTGTCGCTGGTGGTAGCCGCC
ATGGACAGCGTAAAGATCTATCGCACTGATGCCAGTCGACGTTTTTACCA
TGCCATCGAACTGACGGGACATGGTGGTCTTGTGAGAGACATCTCTTGGG
CCAATGGGTCAGTGAGGGGATATGACCTCATTGCTAGTGGCTGCAAGGAT
GGCTTCATCCGGGTTTTCGAGGTATATACCACGGCCTCTGGCTCTGGGTC
ACAAACTTCCAATGGCAACCACGCACATTCTTCATCGCAGTCATCATCAA
TTCGTGCGACCACCCAGTCAGGTATCGGCTCTGCCCTTGCAAGCCGTGCT
CCTGTGTCGATGTCCAGTCGTGCCGCGCCCGCAGATTCACAGTTCAAGCA
TTCGTTCAAGGAAATAGCATGCATTGACAGCAAGCACCTAGACGTGTGGC
AAGTTGGCTTCTCATACGCTGGTGACTGCCTTATTTCCTCAGGCGACGAT
GGTATTGTACGATTCTGGAAGAAGTCCATCTCTGGAGAATGGCTCGAGTA
CGCTGAAACCGATATGGCTTGCCAATAGATGGCTGGATTTGCCGACTTTG
ACGCCGGTCATCGAGACCTAGTCTCGGTCACCAAATTCAATTTTTACGGC
AATCGCATTGTCACGGCTTCAACTGATCACCGCATGAAGGTCTGGGACCA
GAAAGACGGTGAATGGCAGCTCGTAGATACTTGGCGTGCCCATGACGCGG
AGATCCGTGATGCGACCTGGAATGGCCCTTTCACGGGCCAGCACATTGGT
AGCGTGGGCGAAGACATGAAATGCAAGATATGGCAGGAGGATGTTACGCA
ACCCCCCAATTCAGGCCGGCGTTTCAGGTCCATCTTTCGCATGACCGCCC
CTCAGCGCCACCCATTTGTATCAATCGATTTTCGCAACATTGATCTGGAA
TCTTGGATGGCCGTTATTACTCGCGACGGCTACCTGATGATCATGGAGCC
TGTAAGTCCCGACACTCTTGCGGACTGGCAGCCGTTAGATCAGTTTAGAG
TCTGCACTGCTCCTCAGCGAGGAGAAGAAACAAGCTTCAAAGTGCAGTTC
CATCATGATCCTTCGGACATCACGCATTCTGTATTGCCCTCTTCAGATCG
CAAAAGTTTGTCGCTGGTGGTAGCCGCCATGGACAGCGTAAAGATCTATC
GCACTGATGCCAGTCGACGTTTTTACCATGCCATCGAACTGACGGGACAT
GGTGGTCTTGTGAGAGACATCTCTTGGGCCAATGGGTCAGTGAGGGGATA
TGACCTCATTGCTAGTGGCTGCAAGGATGGCTTCATCCGGGTTTTCGAGG
TATATACCACGGCCTCTGGCTCTGGGTCACAAACTTCCAATGGCAACCAC
GCACATTCTTCATCGCAGTCATCATCAATTCGTGCGACCACCCAGTCAGG
TATCGGCTCTGCCCTTGCAAGCCGTGCTCCTGTGTCGATGTCCAGTCGTG
CCGCGCCCGCAGATTCACAGTTCAAGCATTCGTTCAAGGAAATAGCATGC
ATTGACAGCAAGCACCTAGACGTGTGGCAAGTTGGCTTCTCATACGCTGG
TGACTGCCTTATTTCCTCAGGCGACGATGGTATTGTACGATTCTGGAAGA
AGTCCATCTCTGGAGAATGGCTCGAGTACGCTGAAACCGATATGGCTTGC
CAATAGATGGCTGGATTTGCCGACTTTGACGCCGGTCATCGAGACCTAGT
CTCGGTCACCAAATTCAATTTTTACGGCAATCGCATTGTCACGGCTTCAA
CTGATCACCGCATGAAGGTCTGGGACCAGAAAGACGGTGAATGGCAGCTC
GTAGATACTTGGCGTGCCCATGACGCGGAGATCCGTGATGCGACCTGGAA
TGGCCCTTTCACGGGCCAGCACATTGGTAGCGTGGGCGAAGACATGAAAT
GCAAGATATGGCAGGAGGATGTTACGCAACCCCCCAATTCAGGCCGGCGT
TTCAGGTCCATCTTTCGCATGACCGCCCCTCAGCGCCACCCATTTGTATC
AATCGATTTTCGCAACATTGATCTGGAATCTTGGATGGCCGTTATTACTC
GCGACGGCTACCTGATGATCATGGAGCCTGTAAGTCCCGACACTCTTGCG
GACTGGCAGCCGTTAGATCAGTTTAGAGTCTGCACTGCTCCTCAGCGAGG
AGAAGAAACAAGCTTCAAAGTGCAGTTCCATCATGATCCTTCGGACATCA
CGCATTCTGTATTGCCCTCTTCAGATCGCAAAAGTTTGTCGCTGGTGGTA
GCCGCCATGGACAGCGTAAAGATCTATCGCACTGATGCCAGTCGACGTTT
TTACCATGCCATCGAACTGACGGGACATGGTGGTCTTGTGAGAGACATCT
CTTGGGCCAATGGGTCAGTGAGGGGATATGACCTCATTGCTAGTGGCTGC
AAGGATGGCTTCATCCGGGTTTTCGAGGTATATACCACGGCCTCTGGCTC
TGGGTCACAAACTTCCAATGGCAACCACGCACATTCTTCATCGCAGTCAT
CATCAATTCGTGCGACCACCCAGTCAGGTATCGGCTCTGCCCTTGCAAGC
CGTGCTCCTGTGTCGATGTCCAGTCGTGCCGCGCCCGCAGATTCACAGTT
CAAGCATTCGTTCAAGGAAATAGCATGCATTGACAGCAAGCACCTAGACG
TGTGGCAAGTTGGCTTCTCATACGCTGGTGACTGCCTTATTTCCTCAGGC
GACGATGGTATTGTACGATTCTGGAAGAAGTCCATCTCTGGAGAATGGCT
CGAGTACGCTGAAACCGATATGGCTTGCCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54590CAN33_54590Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54590-T1.exon1CAN33_54590-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_54590-T1.exon2CAN33_54590-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54590-T1.exon3CAN33_54590-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54590-T1.cdsCAN33_54590-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54590-T1CAN33_54590-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2928351..2929627 +
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