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CAN33_54675-T1, CAN33_54675-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54675-T1
Unique NameCAN33_54675-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2989472..2990416-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54675-T1 ID=CAN33_54675-T1|Name=CAN33_54675-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=945bp|location=Sequence derived from alignment at NKJJ01000020.1:2989472..2990416- (Aspergillus niger FDAARGOS_311)
ATGGCCTTTCCCCTCCCGCGGGGCATCACGCCCCCGGAGATCTCCTTCCT
CGCGGAGATGGAGATGGTCACCATCTTGCCTCGTCAGCGACTCGAGGGGC
TTGAATTACTGGGAGTACGTCCTATACACACATCTTCCGCTACTAATCAC
AGCTAACAACTCTTCCAATAGGGCCCCGTCTCCCCCCTCCTCCCACCCCG
ACGCACCTCCCTCCCCCTCTGGCTTGCCCTCCTCCTCAAACGCCAACGCC
GTGCCAACATCCTCCCCCGCCCTGGCTCCACCCCGAATCTCTGGAGCTCA
TCCTCGAAATCGAGACCCAAAACGACGAATACCAGCACGCCTTCTCTCCG
CCACCTCCACTGCCCGGCCAGCCCGCCCCGGGAGATCACCGTCGCGCTCC
GCTCGCAACCCCGCGCTACACTCCCTCCGGCGAGAAATACTACCCTGCGC
CGCCGTTCCTGCCTCAGAATACAGCACGCGATCACATCCCGCCGGGCGAG
CCACCGGCACTACCGTTCCATTGGTTGGAGGTAGGGACGATGTTGCTGGA
GGCGGCGAGCGATGATCTTGTGGATCCGGATCAGACGAGACGGCTGTTGA
AGGAGCTGAGGGAAGTGAGGATGGCGAAGGTTAGGGCGGGTGTGGATGTC
CTAGATGCGGCGGCTATGGGGGGTGGGGGTGTTGCGTTGACGGGTGTGGG
AGCTATGGAGTTGGGAGAGGGGAGGAGGTTCATTGCGGGGGTGGTGGATG
GACTGAGGTATGTCCTTGTCACTTCTTCTATTCTTTTGTTTCACAATCGT
TGTTGGAGGTGGGTTGCTAACGAGTCATGTCGATAGGCGCATCGGGGCGT
CCAAGGAACAGGCGAGGAGAGAAGAGATGGCAGAGGAAATGGCGAATGGG
GGGTATGATGGGACACAAGACGATGATGATGAAATGGAGTTTTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2989472..2990416-

>CAN33_54675-T1 ID=CAN33_54675-T1|Name=CAN33_54675-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2439bp|location=Sequence derived from alignment at NKJJ01000020.1:2989472..2990416- (Aspergillus niger FDAARGOS_311)
GCGCATCGGGGCGTCCAAGGAACAGGCGAGGAGAGAAGAGATGGCAGAGG
AAATGGCGAATGGGGGGTATGATGGGACACAAGACGATGATGATGAAATG
GAGTTTTAGGGCCCCGTCTCCCCCCTCCTCCCACCCCGACGCACCTCCCT
CCCCCTCTGGCTTGCCCTCCTCCTCAAACGCCAACGCCGTGCCAACATCC
TCCCCCGCCCTGGCTCCACCCCGAATCTCTGGAGCTCATCCTCGAAATCG
AGACCCAAAACGACGAATACCAGCACGCCTTCTCTCCGCCACCTCCACTG
CCCGGCCAGCCCGCCCCGGGAGATCACCGTCGCGCTCCGCTCGCAACCCC
GCGCTACACTCCCTCCGGCGAGAAATACTACCCTGCGCCGCCGTTCCTGC
CTCAGAATACAGCACGCGATCACATCCCGCCGGGCGAGCCACCGGCACTA
CCGTTCCATTGGTTGGAGGTAGGGACGATGTTGCTGGAGGCGGCGAGCGA
TGATCTTGTGGATCCGGATCAGACGAGACGGCTGTTGAAGGAGCTGAGGG
AAGTGAGGATGGCGAAGGTTAGGGCGGGTGTGGATGTCCTAGATGCGGCG
GCTATGGGGGGTGGGGGTGTTGCGTTGACGGGTGTGGGAGCTATGGAGTT
GGGAGAGGGGAGGAGGTTCATTGCGGGGGTGGTGGATGGACTGAGATGGC
CTTTCCCCTCCCGCGGGGCATCACGCCCCCGGAGATCTCCTTCCTCGCGG
AGATGGAGATGGTCACCATCTTGCCTCGTCAGCGACTCGAGGGGCTTGAA
TTACTGGGAGTACGCGCATCGGGGCGTCCAAGGAACAGGCGAGGAGAGAA
GAGATGGCAGAGGAAATGGCGAATGGGGGGTATGATGGGACACAAGACGA
TGATGATGAAATGGAGTTTTAGGGCCCCGTCTCCCCCCTCCTCCCACCCC
GACGCACCTCCCTCCCCCTCTGGCTTGCCCTCCTCCTCAAACGCCAACGC
CGTGCCAACATCCTCCCCCGCCCTGGCTCCACCCCGAATCTCTGGAGCTC
ATCCTCGAAATCGAGACCCAAAACGACGAATACCAGCACGCCTTCTCTCC
GCCACCTCCACTGCCCGGCCAGCCCGCCCCGGGAGATCACCGTCGCGCTC
CGCTCGCAACCCCGCGCTACACTCCCTCCGGCGAGAAATACTACCCTGCG
CCGCCGTTCCTGCCTCAGAATACAGCACGCGATCACATCCCGCCGGGCGA
GCCACCGGCACTACCGTTCCATTGGTTGGAGGTAGGGACGATGTTGCTGG
AGGCGGCGAGCGATGATCTTGTGGATCCGGATCAGACGAGACGGCTGTTG
AAGGAGCTGAGGGAAGTGAGGATGGCGAAGGTTAGGGCGGGTGTGGATGT
CCTAGATGCGGCGGCTATGGGGGGTGGGGGTGTTGCGTTGACGGGTGTGG
GAGCTATGGAGTTGGGAGAGGGGAGGAGGTTCATTGCGGGGGTGGTGGAT
GGACTGAGATGGCCTTTCCCCTCCCGCGGGGCATCACGCCCCCGGAGATC
TCCTTCCTCGCGGAGATGGAGATGGTCACCATCTTGCCTCGTCAGCGACT
CGAGGGGCTTGAATTACTGGGAGTACGCGCATCGGGGCGTCCAAGGAACA
GGCGAGGAGAGAAGAGATGGCAGAGGAAATGGCGAATGGGGGGTATGATG
GGACACAAGACGATGATGATGAAATGGAGTTTTAGGGCCCCGTCTCCCCC
CTCCTCCCACCCCGACGCACCTCCCTCCCCCTCTGGCTTGCCCTCCTCCT
CAAACGCCAACGCCGTGCCAACATCCTCCCCCGCCCTGGCTCCACCCCGA
ATCTCTGGAGCTCATCCTCGAAATCGAGACCCAAAACGACGAATACCAGC
ACGCCTTCTCTCCGCCACCTCCACTGCCCGGCCAGCCCGCCCCGGGAGAT
CACCGTCGCGCTCCGCTCGCAACCCCGCGCTACACTCCCTCCGGCGAGAA
ATACTACCCTGCGCCGCCGTTCCTGCCTCAGAATACAGCACGCGATCACA
TCCCGCCGGGCGAGCCACCGGCACTACCGTTCCATTGGTTGGAGGTAGGG
ACGATGTTGCTGGAGGCGGCGAGCGATGATCTTGTGGATCCGGATCAGAC
GAGACGGCTGTTGAAGGAGCTGAGGGAAGTGAGGATGGCGAAGGTTAGGG
CGGGTGTGGATGTCCTAGATGCGGCGGCTATGGGGGGTGGGGGTGTTGCG
TTGACGGGTGTGGGAGCTATGGAGTTGGGAGAGGGGAGGAGGTTCATTGC
GGGGGTGGTGGATGGACTGAGATGGCCTTTCCCCTCCCGCGGGGCATCAC
GCCCCCGGAGATCTCCTTCCTCGCGGAGATGGAGATGGTCACCATCTTGC
CTCGTCAGCGACTCGAGGGGCTTGAATTACTGGGAGTAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF2CAN33_54675Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54675-T1CAN33_54675-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54675-T1.cdsCAN33_54675-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54675-T1.exon3CAN33_54675-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_54675-T1.exon2CAN33_54675-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54675-T1.exon1CAN33_54675-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036224
DBxrefInterPro:IPR021151
DBxrefInterPro:IPR007257
DBxrefPFAM:PF05916
ProductDNA replication protein psf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2989472..2990416 -
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