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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2998580..2999585- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54700-T1 ID=CAN33_54700-T1|Name=CAN33_54700-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1006bp|location=Sequence derived from alignment at NKJJ01000020.1:2998580..2999585- (Aspergillus niger FDAARGOS_311)
ATGGCTCTTGAACTAAAAGAAAAGGGCAACCAGCTCTTTAAAGAAGGCGA
TTACAATGGCGCCGAGGAGATGTATTCACAAGCGTGAGCATATATCCCAC
TACCCCGCTAACACCCAAACCTCCACTAAATACCAAGCGTATACTAACCA
CCGAATACCTACAACAAACAGAATCCTCAAGAACCCTAAAGAACCCACCT
TCTTCTCCAACCGCGCCCTCACCCGCATCCGTCTCGAAAACTGGGCCGGA
GTTGAGCACGATGCCCGCGCCGCCATCGATCTGTACGGCGCCAAATCTCC
TACTAGTTTGAAATCCTCCTGGTATCTGGCACAAGCGCTGTTGGGCTTGC
AACGACCTCAGGAAGCATACGATGTAGCCATTGAAGGGTATAAGGCGAGT
CTGGCGGCGAAGAACATCCAGACGGAGAATTTGTCGCGGACGGTGCTGCG
CGCTAAGCAGGCAATTTGGGCGGCCAAGGAGACGGCGCGGATAAGGGAGT
TGGATGAGACGCTGGCGAGTGTGGAGGGGCTGATTGAGGCGGAGATGGAG
AGGGGGTTGACGGAGTTGAAGGGGCGGCTGGAGAAGGGCGAGATTGGGGA
GATTGGGTTTAGGGAGGATGAGAGGGAGATTAGAGAGGATGCTGAGCGGA
AGGTGCAGAGGGTGAGGGAGGCGTTTGCGATTGCGTCGGAGGGGAAGGTG
GTTGAGAGAGTAAGTTCTTCCTTCTTCCTTTTCGGTGAGTTACTAGTGAG
TTGTGCTGATAATATGGTATAGGTTGTGCCTGATTATCTGGTGGATGGAA
TTACGTTTGAGATTATGCATGACCCTGTTATCACTCCATCCGGGACCAGC
TTTGACCGGTTTGGCATCACCAAGTACGTGGAGCAGGCCAAGGTTGACCC
CATCACACGAGTGCCGATGACGGTGAATGATCTTCGGCCGAATTATGCGT
TGAAGGCGGCGTGCGAGGAGTTCCTGGATAAGAATGGCTGGGCAGTGGAT
TGGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2998580..2999585- >CAN33_54700-T1 ID=CAN33_54700-T1|Name=CAN33_54700-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2565bp|location=Sequence derived from alignment at NKJJ01000020.1:2998580..2999585- (Aspergillus niger FDAARGOS_311)
GTTGTGCCTGATTATCTGGTGGATGGAATTACGTTTGAGATTATGCATGA
CCCTGTTATCACTCCATCCGGGACCAGCTTTGACCGGTTTGGCATCACCA
AGTACGTGGAGCAGGCCAAGGTTGACCCCATCACACGAGTGCCGATGACG
GTGAATGATCTTCGGCCGAATTATGCGTTGAAGGCGGCGTGCGAGGAGTT
CCTGGATAAGAATGGCTGGGCAGTGGATTGGTGAAATCCTCAAGAACCCT
AAAGAACCCACCTTCTTCTCCAACCGCGCCCTCACCCGCATCCGTCTCGA
AAACTGGGCCGGAGTTGAGCACGATGCCCGCGCCGCCATCGATCTGTACG
GCGCCAAATCTCCTACTAGTTTGAAATCCTCCTGGTATCTGGCACAAGCG
CTGTTGGGCTTGCAACGACCTCAGGAAGCATACGATGTAGCCATTGAAGG
GTATAAGGCGAGTCTGGCGGCGAAGAACATCCAGACGGAGAATTTGTCGC
GGACGGTGCTGCGCGCTAAGCAGGCAATTTGGGCGGCCAAGGAGACGGCG
CGGATAAGGGAGTTGGATGAGACGCTGGCGAGTGTGGAGGGGCTGATTGA
GGCGGAGATGGAGAGGGGGTTGACGGAGTTGAAGGGGCGGCTGGAGAAGG
GCGAGATTGGGGAGATTGGGTTTAGGGAGGATGAGAGGGAGATTAGAGAG
GATGCTGAGCGGAAGGTGCAGAGGGTGAGGGAGGCGTTTGCGATTGCGTC
GGAGGGGAAGGTGGTTGAGAGAATGGCTCTTGAACTAAAAGAAAAGGGCA
ACCAGCTCTTTAAAGAAGGCGATTACAATGGCGCCGAGGAGATGTATTCA
CAAGCGTTGTGCCTGATTATCTGGTGGATGGAATTACGTTTGAGATTATG
CATGACCCTGTTATCACTCCATCCGGGACCAGCTTTGACCGGTTTGGCAT
CACCAAGTACGTGGAGCAGGCCAAGGTTGACCCCATCACACGAGTGCCGA
TGACGGTGAATGATCTTCGGCCGAATTATGCGTTGAAGGCGGCGTGCGAG
GAGTTCCTGGATAAGAATGGCTGGGCAGTGGATTGGTGAAATCCTCAAGA
ACCCTAAAGAACCCACCTTCTTCTCCAACCGCGCCCTCACCCGCATCCGT
CTCGAAAACTGGGCCGGAGTTGAGCACGATGCCCGCGCCGCCATCGATCT
GTACGGCGCCAAATCTCCTACTAGTTTGAAATCCTCCTGGTATCTGGCAC
AAGCGCTGTTGGGCTTGCAACGACCTCAGGAAGCATACGATGTAGCCATT
GAAGGGTATAAGGCGAGTCTGGCGGCGAAGAACATCCAGACGGAGAATTT
GTCGCGGACGGTGCTGCGCGCTAAGCAGGCAATTTGGGCGGCCAAGGAGA
CGGCGCGGATAAGGGAGTTGGATGAGACGCTGGCGAGTGTGGAGGGGCTG
ATTGAGGCGGAGATGGAGAGGGGGTTGACGGAGTTGAAGGGGCGGCTGGA
GAAGGGCGAGATTGGGGAGATTGGGTTTAGGGAGGATGAGAGGGAGATTA
GAGAGGATGCTGAGCGGAAGGTGCAGAGGGTGAGGGAGGCGTTTGCGATT
GCGTCGGAGGGGAAGGTGGTTGAGAGAATGGCTCTTGAACTAAAAGAAAA
GGGCAACCAGCTCTTTAAAGAAGGCGATTACAATGGCGCCGAGGAGATGT
ATTCACAAGCGTTGTGCCTGATTATCTGGTGGATGGAATTACGTTTGAGA
TTATGCATGACCCTGTTATCACTCCATCCGGGACCAGCTTTGACCGGTTT
GGCATCACCAAGTACGTGGAGCAGGCCAAGGTTGACCCCATCACACGAGT
GCCGATGACGGTGAATGATCTTCGGCCGAATTATGCGTTGAAGGCGGCGT
GCGAGGAGTTCCTGGATAAGAATGGCTGGGCAGTGGATTGGTGAAATCCT
CAAGAACCCTAAAGAACCCACCTTCTTCTCCAACCGCGCCCTCACCCGCA
TCCGTCTCGAAAACTGGGCCGGAGTTGAGCACGATGCCCGCGCCGCCATC
GATCTGTACGGCGCCAAATCTCCTACTAGTTTGAAATCCTCCTGGTATCT
GGCACAAGCGCTGTTGGGCTTGCAACGACCTCAGGAAGCATACGATGTAG
CCATTGAAGGGTATAAGGCGAGTCTGGCGGCGAAGAACATCCAGACGGAG
AATTTGTCGCGGACGGTGCTGCGCGCTAAGCAGGCAATTTGGGCGGCCAA
GGAGACGGCGCGGATAAGGGAGTTGGATGAGACGCTGGCGAGTGTGGAGG
GGCTGATTGAGGCGGAGATGGAGAGGGGGTTGACGGAGTTGAAGGGGCGG
CTGGAGAAGGGCGAGATTGGGGAGATTGGGTTTAGGGAGGATGAGAGGGA
GATTAGAGAGGATGCTGAGCGGAAGGTGCAGAGGGTGAGGGAGGCGTTTG
CGATTGCGTCGGAGGGGAAGGTGGTTGAGAGAATGGCTCTTGAACTAAAA
GAAAAGGGCAACCAGCTCTTTAAAGAAGGCGATTACAATGGCGCCGAGGA
GATGTATTCACAAGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016567 | protein ubiquitination |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0004842 | ubiquitin-protein transferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR019734 |
| DBxref | InterPro:IPR003613 |
| DBxref | PFAM:PF04564 |
| Product | U-box domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2998580..2999585 - |
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