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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3013951..3014786+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54725-T1 ID=CAN33_54725-T1|Name=CAN33_54725-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=836bp|location=Sequence derived from alignment at NKJJ01000020.1:3013951..3014786+ (Aspergillus niger FDAARGOS_311)
ATGGGAGGCTCCTTGTCTCGTATGTGGTCCTTTCTCTGGACGAAGAAGGA
GATTCGCATCCTCATCCTCGGTCTGGTAGGTATAATCATGCTTTGGCACT
AGGCATCAAGCTACTAGCGAGTTTCATACTAACCCGCGCTCCCATCTCTA
GGATAACGCCGGAAAAACAACACTTCTTTACAGACTCAAGGTGCGTATAG
CCTTGCAGAGCTACTCTACTGTCAGCTAGAGGCCAGTGTTAATGTGCCAG
GAATAGATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGT
CGAATCGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGTAAGTCAAC
GCTACAATACCATTATAGTTGCCATTTGGTAGAGAAAAAGTATCTGAGGT
TGCTGACTTTTCGCTGTCGTTCAGGATCTCGGAGGTCAAACGTCCATTCG
ACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCA
TTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCG
GCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGC
CAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGG
CTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGC
TCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGGT
ATGTGCATCTTCAAGCTCCTTTCCTTCACTTTGGATAAGTACTGACCTTT
TATACACAGCAAACTCTTCAGTCTGAAAACGCATGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3013951..3014786+ >CAN33_54725-T1 ID=CAN33_54725-T1|Name=CAN33_54725-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2745bp|location=Sequence derived from alignment at NKJJ01000020.1:3013951..3014786+ (Aspergillus niger FDAARGOS_311)
ATGGGAGGCTCCTTGTCTCGTATGTGGTCCTTTCTCTGGACGAAGAAGGA
GATTCGCATCCTCATCCTCGGTCTGGATAACGCCGGAAAAACAACACTTC
TTTACAGACTCAAGATTGGTGAAGTTGTTACCACGATACCAACCATTGGT
TTCAACGTCGAATCGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGA
TCTCGGAGGTCAAACGTCCATTCGACCTTACTGGCGCTGCTACTATGCGA
ACACCGCTGCTGTCATATTCGTCATTGATTCCACAGATATTGAGCGACTC
GGCACGGCTGCTGACGAACTAGCGGCTATGCTGAATGAGGAGGAACTTCG
TGATGCGGCGCTGTTGGTATTTGCCAACAAGCAGGACCAGCCTGGCGCCA
AAGGTGCCGGCGAAATATCAGAGGCTCTCAAGCTGGGAGAGCTAAGGGAT
AGAAACTGGAGCATCGTCGCATGCTCTGCTATCGACGGCAAAGGTCTTAA
CGAAGGCATGGATTGGCTGGTGCAAACTCTTCAGTCTGAAAACGCATGAA
TGGGAGGCTCCTTGTCTCGTATGTGGTCCTTTCTCTGGACGAAGAAGGAG
ATTCGCATCCTCATCCTCGGTCTGGATAACGCCGGAAAAACAACACTTCT
TTACAGACTCAAGATTGGTGAAGTTGTTACCACGATACCAACCATTGGTT
TCAACGTCGAATCGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGAT
CTCGGAGGTCAAACGTCCATTCGACCTTACTGGCGCTGCTACTATGCGAA
CACCGCTGCTGTCATATTCGTCATTGATTCCACAGATATTGAGCGACTCG
GCACGGCTGCTGACGAACTAGCGGCTATGCTGAATGAGGAGGAACTTCGT
GATGCGGCGCTGTTGGTATTTGCCAACAAGCAGGACCAGCCTGGCGCCAA
AGGTGCCGGCGAAATATCAGAGGCTCTCAAGCTGGGAGAGCTAAGGGATA
GAAACTGGAGCATCGTCGCATGCTCTGCTATCGACGGCAAAGGTCTTAAC
GAAGGCATGGATTGGCTGGTGCAAACTCTTCAGTCTGAAAACGCATGAAT
GGGAGGCTCCTTGTCTCGTATGTGGTCCTTTCTCTGGACGAAGAAGGAGA
TTCGCATCCTCATCCTCGGTCTGGATAACGCCGGAAAAACAACACTTCTT
TACAGACTCAAGATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTT
CAACGTCGAATCGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGATC
TCGGAGGTCAAACGTCCATTCGACCTTACTGGCGCTGCTACTATGCGAAC
ACCGCTGCTGTCATATTCGTCATTGATTCCACAGATATTGAGCGACTCGG
CACGGCTGCTGACGAACTAGCGGCTATGCTGAATGAGGAGGAACTTCGTG
ATGCGGCGCTGTTGGTATTTGCCAACAAGCAGGACCAGCCTGGCGCCAAA
GGTGCCGGCGAAATATCAGAGGCTCTCAAGCTGGGAGAGCTAAGGGATAG
AAACTGGAGCATCGTCGCATGCTCTGCTATCGACGGCAAAGGTCTTAACG
AAGGCATGGATTGGCTGGTGCAAACTCTTCAGTCTGAAAACGCATGAATG
GGAGGCTCCTTGTCTCGTATGTGGTCCTTTCTCTGGACGAAGAAGGAGAT
TCGCATCCTCATCCTCGGTCTGGATAACGCCGGAAAAACAACACTTCTTT
ACAGACTCAAGATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTC
AACGTCGAATCGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGATCT
CGGAGGTCAAACGTCCATTCGACCTTACTGGCGCTGCTACTATGCGAACA
CCGCTGCTGTCATATTCGTCATTGATTCCACAGATATTGAGCGACTCGGC
ACGGCTGCTGACGAACTAGCGGCTATGCTGAATGAGGAGGAACTTCGTGA
TGCGGCGCTGTTGGTATTTGCCAACAAGCAGGACCAGCCTGGCGCCAAAG
GTGCCGGCGAAATATCAGAGGCTCTCAAGCTGGGAGAGCTAAGGGATAGA
AACTGGAGCATCGTCGCATGCTCTGCTATCGACGGCAAAGGTCTTAACGA
AGGCATGGATTGGCTGGTGCAAACTCTTCAGTCTGAAAACGCATGAATGG
GAGGCTCCTTGTCTCGTATGTGGTCCTTTCTCTGGACGAAGAAGGAGATT
CGCATCCTCATCCTCGGTCTGGATAACGCCGGAAAAACAACACTTCTTTA
CAGACTCAAGATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCA
ACGTCGAATCGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGATCTC
GGAGGTCAAACGTCCATTCGACCTTACTGGCGCTGCTACTATGCGAACAC
CGCTGCTGTCATATTCGTCATTGATTCCACAGATATTGAGCGACTCGGCA
CGGCTGCTGACGAACTAGCGGCTATGCTGAATGAGGAGGAACTTCGTGAT
GCGGCGCTGTTGGTATTTGCCAACAAGCAGGACCAGCCTGGCGCCAAAGG
TGCCGGCGAAATATCAGAGGCTCTCAAGCTGGGAGAGCTAAGGGATAGAA
ACTGGAGCATCGTCGCATGCTCTGCTATCGACGGCAAAGGTCTTAACGAA
GGCATGGATTGGCTGGTGCAAACTCTTCAGTCTGAAAACGCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264RJ7 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR005225 |
| DBxref | InterPro:IPR006689 |
| DBxref | PFAM:PF09439 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF00025 |
| Product | Arf GTPase arl1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3013951..3014786 + |
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