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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3058667..3059435+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54810-T1 ID=CAN33_54810-T1|Name=CAN33_54810-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=769bp|location=Sequence derived from alignment at NKJJ01000020.1:3058667..3059435+ (Aspergillus niger FDAARGOS_311)
ATGGACACACCCGTGCGCCTTACCGTTCTCATATCCGGCAATGGCTCCAA
CCTCCAAGCAGTGATAGACAAGACGCAGCAAGGACAACTCTCGACGCAGA
TCGTGCGCGTCATCTCCAATCGCCAGAATGCGTATGGTCTCGAGCGGGCT
CGACAGGCCAACATCCCCACGCAATACCACAACTTGGTGAAATACAAGAA
ACAGCACCCTGCTACACCGGAGGGCATCCAGGCGGCGCGGGAAGAATACG
ACGCCGAATTGGCCCGATTGGTACTGGCTGATAAGCCGGAAATGGTGGCT
TGTTTGGGATTCATGCATGTTTTGTCTCCGAGGTTCTTGGAGCCGTTGGA
GGAAGCTAAGATTAATATCATTAATCTGCATCCGGCTTTGCCCGGAGCGT
TTAATGGGGCGGTATGTTTATTGTTTGTTTTCTTACGTCCTTCTCTTTTA
ACTTGTGCCTCTAAAATTCATCCGTGGGCAAGAAGAAATCATGCTGACGT
AATTCTGGGATGGGTGGGTGAAATAGAACGCTATCGAGCGTGCGCATGCT
GCTTGGTTGGAAGGGAAAATCGATAAGACGGGTGTTATGATTCATAAGGT
CATTTCGGAGGTGGATATGGGGCAGCCCATTTTGGTCAGAGAGATTCCGT
TTGTGAAGGGGGAGGATGAAGATCTGCATAGATTTGAGCAGAAGGTGCAT
GAGGTCGAGTGGGGAGTGGTTATTGAGGGGGTGAAGCTTACGATCCAGGA
GGTCCAGGAGGCAAGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3058667..3059435+ >CAN33_54810-T1 ID=CAN33_54810-T1|Name=CAN33_54810-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1308bp|location=Sequence derived from alignment at NKJJ01000020.1:3058667..3059435+ (Aspergillus niger FDAARGOS_311)
ATGGACACACCCGTGCGCCTTACCGTTCTCATATCCGGCAATGGCTCCAA
CCTCCAAGCAGTGATAGACAAGACGCAGCAAGGACAACTCTCGACGCAGA
TCGTGCGCGTCATCTCCAATCGCCAGAATGCGTATGGTCTCGAGCGGGCT
CGACAGGCCAACATCCCCACGCAATACCACAACTTGGTGAAATACAAGAA
ACAGCACCCTGCTACACCGGAGGGCATCCAGGCGGCGCGGGAAGAATACG
ACGCCGAATTGGCCCGATTGGTACTGGCTGATAAGCCGGAAATGGTGGCT
TGTTTGGGATTCATGCATGTTTTGTCTCCGAGGTTCTTGGAGCCGTTGGA
GGAAGCTAAGATTAATATCATTAATCTGCATCCGGCTTTGCCCGGAGCGT
TTAATGGGGCGAACGCTATCGAGCGTGCGCATGCTGCTTGGTTGGAAGGG
AAAATCGATAAGACGGGTGTTATGATTCATAAGGTCATTTCGGAGGTGGA
TATGGGGCAGCCCATTTTGGTCAGAGAGATTCCGTTTGTGAAGGGGGAGG
ATGAAGATCTGCATAGATTTGAGCAGAAGGTGCATGAGGTCGAGTGGGGA
GTGGTTATTGAGGGGGTGAAGCTTACGATCCAGGAGGTCCAGGAGGCAAG
GTAGATGGACACACCCGTGCGCCTTACCGTTCTCATATCCGGCAATGGCT
CCAACCTCCAAGCAGTGATAGACAAGACGCAGCAAGGACAACTCTCGACG
CAGATCGTGCGCGTCATCTCCAATCGCCAGAATGCGTATGGTCTCGAGCG
GGCTCGACAGGCCAACATCCCCACGCAATACCACAACTTGGTGAAATACA
AGAAACAGCACCCTGCTACACCGGAGGGCATCCAGGCGGCGCGGGAAGAA
TACGACGCCGAATTGGCCCGATTGGTACTGGCTGATAAGCCGGAAATGGT
GGCTTGTTTGGGATTCATGCATGTTTTGTCTCCGAGGTTCTTGGAGCCGT
TGGAGGAAGCTAAGATTAATATCATTAATCTGCATCCGGCTTTGCCCGGA
GCGTTTAATGGGGCGAACGCTATCGAGCGTGCGCATGCTGCTTGGTTGGA
AGGGAAAATCGATAAGACGGGTGTTATGATTCATAAGGTCATTTCGGAGG
TGGATATGGGGCAGCCCATTTTGGTCAGAGAGATTCCGTTTGTGAAGGGG
GAGGATGAAGATCTGCATAGATTTGAGCAGAAGGTGCATGAGGTCGAGTG
GGGAGTGGTTATTGAGGGGGTGAAGCTTACGATCCAGGAGGTCCAGGAGG
CAAGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016742 | hydroxymethyl-, formyl- and related transferase activity |
| GO:0004644 | phosphoribosylglycinamide formyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009058 | biosynthetic process |
| GO:0006189 | 'de novo' IMP biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264G7L |
| DBxref | InterPro:IPR036477 |
| DBxref | InterPro:IPR002376 |
| DBxref | InterPro:IPR004607 |
| DBxref | PFAM:PF00551 |
| Product | phosphoribosylglycinamide formyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3058667..3059435 + |
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