|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3098504..3101280- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54850-T1 ID=CAN33_54850-T1|Name=CAN33_54850-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2777bp|location=Sequence derived from alignment at NKJJ01000020.1:3098504..3101280- (Aspergillus niger FDAARGOS_311)
ATGTCCAACCTGGGCGCCGGTCTGAAGAAGCAGGAATGGGATCTTGACTC
CCTGCCCAAGTTCGAGAAGTCCTTCTACAAGGAACACGCCGATGTCGCCG
AGCGCTCTCAGCGTGATGTTGACGAGTTCCGTAAGAAGCACGAGATGGCT
GTTCAGGGAAGAAACGTCCCTCGCCCTGTCGAGACCTTCGACGAGGCCGG
TTTCCCTCAATACGTTCTCAGCGAGGTCAAGGCCCAGGGCTTCGACCGCC
CTACCGCTATTCAGTCTCAGGGTTGGCCCATGGCCCTCTCTGGTCGCGAC
GTTGTCGGTATCGCTGAGACGGGTTCCGGAAAGACCCTGACCTACTGTCT
TCCTGCCATTGTTCACATCAACGCCCAGCCCCTCCTCGCCCCCGGTGACG
GCCCCATTGTCCTTATCCTCGCCCCCACCCGTGAATTGGCCGTTCAGATT
CAAGCCGAAATCTCCAAGTTCGGAAAGTCTTCCCGTATCCGCAACACCTG
TGTCTACGGTGGTGTCCCCAAGGGTCCTCAGATCCGTGACCTGAGCCGTG
GTGTGGAAGTCTGCATTGCGACTCCCGGTCGTCTGATTGACATGCTCGAG
GCTGGTCGCACCAACCTTCGTCGTGTCACCTACCTCGTTCTGGATGAGGC
CGATCGCATGCTGGACATGGGTTTCGAGCCCCAGATCCGCAAGATCATCT
CCCAGATTCGCCCTGACCGTCAGACCTGCATGTGGTCCGCTACATGGCCC
AAGGAGGTCCGTCAGCTTGCGTCTGACTTCCTCAACGACTACATCCAGGT
TAACATTGGTTCCATGGATCTGTCGGCCAACCACCGTATCACTCAGATCG
TCGAGGTCGTCTCGGACTTCGAGAAGCGCGACAAGATGATCAAGCACCTC
GAGAAGATCATGGAGAACCGTGCCAACAAGTGCCTTATCTTCACCGGCAC
CAAGCGCATCGCTGACGAAATCACTCGCTTCCTCCGCCAGGACGGATGGC
CGGCACTTTGTAAGCTTCCTTGGATCCCAATACTGAAACAGCTATTTGCT
AACCTGCGTTCCAGCTATTCACGGTGATAAGCAACAGCAAGAAAGAGATT
GGGTCTTGAACGAGTTCAAGACGGGCAAGAGCCCAATCATGGTGGCTACT
GATGTGGCTTCCCGTGGTATCGGTATGAATAAATCGCAAACTCCCCCTCC
CCTTCCCCCCTTCCTCCCTTCCTTTCTTGCCTCCCGAGTCACCCTCACCC
ATATTGAGGTTGTGTGACCATGGCACGGTGCTTAACTCTCTTCCACCAAT
TGTTGGTGTGTATGACTCTTCCAGGCTTTGTCGGGTCTCCTGAAATGGTT
CTCAAGCCAGGAGAGCCTTGGACTCACAGTGCAGTGTAGCAGACGTATTA
CTCTTCTGTTTTGATTCACCATATCTACCTTTTGAAACTTGGCCGGTAGA
GGGAGGGAAAGCTCCTCTCTTACCGACTTGTTGAAGCTGCATTCCAAGGT
TGCTCTAGGACCACGATATCTGCCACCCTCGGACTCGTCTGTCACGGATC
TTTTGATGATTTAAGTCCGAGCGAGAGAGAGAGATGCATCAAGTCTCACG
ACTGAGAAAGGGCTCCTAAGCCACGTTGCTCATTTGACTAATGCTCTGTA
TGCTAACGTTACATATGTTTGAAGATGTGCGCGACATCACACACGTTCTC
AACTATGACTACCCCAACAACTCGGAGGACTACGTTCACCGTATTGGTAG
AACTGGTCGTGCCGGTGCTAAGGGTACCGCCATCACCTTCTTTACCACTG
ACAGTAAGTCGTTTCTTCCCTTATGAAACGCCTCTTCAGTACTAACATGT
CCATCTTGCAGACTCCAAGCAGGCTCGTGACTTGGTCACCATTCTCACTG
AGGCCAAGCAGCAGATTGACCCCCGTCTCGCCGAGATGGTCCGCTACAGT
GGCGGCGGTGGTCATGGCCACGGTGGCTATGGCCGCTGGGGTGGCCGTGG
TGGTGGCCGTGGCCGCGGCAACCACTTCACTGCTTCCAATGCTGCTCCTC
TTGGTGGCAACCGTCGCTGGTAACCTGACCTCGCTGCTCAGTTCACTCAC
TGAGCTTGTATTCCATTCTCACATCGGTAGACGTTCTTTTTCCTTCGCAT
GATTCCTTTTTCGTAACCACGGTACGGGCGGCGTTCGTCGATATCACGAT
AGACTATTCGCGTGTTTTGCTCAGTTTACAACAACAGGCTCCCCCGACAT
AGGGTGACCTCGAAACCTACACGATTGTGCACTGATATTTCTCATGGATA
CACGTTAATTATCTCATTCTTTGTTGTGGTTTATCAAACAAAAAAGTTAT
GTATCACTTGGCTTGTTCCCGGAACGGATGGGACTAGATAGTGTGTAGCT
TCACTTGCATGCTGATAATTGGAGAGAAACTGTACCTATCTGCTTCTGGT
TTTTTTAGCTTTATGAAATGGTCAATCGTTTTACCTCTTGACAAAATTGC
TGGGAGCACACCTTTACACCATCACAAGTTACCCTCTCAAGTCACCTACA
TGAAGTCCATGCACTTAGATAGTAATCTACAGGCTTGATCCCTGCTATCC
AGCCTCGATCTGCAACACCCCCTCCATCCACCAAGAAAAAGCAAAGGGAA
TACAACAGCAGCAGCAGCAGCACAAAGCACGCCCGAATGAAACAGGCGGT
AGCTGCATAACACCGCAGCAGCCACGCAGGAAGCAGAGACACCGGGTGAG
CGGACTGACCAGTTTATTTACCAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3098504..3101280- >CAN33_54850-T1 ID=CAN33_54850-T1|Name=CAN33_54850-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6630bp|location=Sequence derived from alignment at NKJJ01000020.1:3098504..3101280- (Aspergillus niger FDAARGOS_311)
TAGACTCCAAGCAGGCTCGTGACTTGGTCACCATTCTCACTGAGGCCAAG
CAGCAGATTGACCCCCGTCTCGCCGAGATGATGTGCGCGACATCACACAC
GTTCTCAACTATGACTACCCCAACAACTCGGAGGACTACGTTCACCGTAT
TGGTAGAACTGGTCGTGCCGGTGCTAAGGGTACCGCCATCACCTTCTTTA
CCACTGACACTATTCACGGTGATAAGCAACAGCAAGAAAGAGATTGGGTC
TTGAACGAGTTCAAGACGGGCAAGAGCCCAATCATGGTGGCTACTGATGT
GGCTTCCCGTGGTATCGATGTCCAACCTGGGCGCCGGTCTGAAGAAGCAG
GAATGGGATCTTGACTCCCTGCCCAAGTTCGAGAAGTCCTTCTACAAGGA
ACACGCCGATGTCGCCGAGCGCTCTCAGCGTGATGTTGACGAGTTCCGTA
AGAAGCACGAGATGGCTGTTCAGGGAAGAAACGTCCCTCGCCCTGTCGAG
ACCTTCGACGAGGCCGGTTTCCCTCAATACGTTCTCAGCGAGGTCAAGGC
CCAGGGCTTCGACCGCCCTACCGCTATTCAGTCTCAGGGTTGGCCCATGG
CCCTCTCTGGTCGCGACGTTGTCGGTATCGCTGAGACGGGTTCCGGAAAG
ACCCTGACCTACTGTCTTCCTGCCATTGTTCACATCAACGCCCAGCCCCT
CCTCGCCCCCGGTGACGGCCCCATTGTCCTTATCCTCGCCCCCACCCGTG
AATTGGCCGTTCAGATTCAAGCCGAAATCTCCAAGTTCGGAAAGTCTTCC
CGTATCCGCAACACCTGTGTCTACGGTGGTGTCCCCAAGGGTCCTCAGAT
CCGTGACCTGAGCCGTGGTGTGGAAGTCTGCATTGCGACTCCCGGTCGTC
TGATTGACATGCTCGAGGCTGGTCGCACCAACCTTCGTCGTGTCACCTAC
CTCGTTCTGGATGAGGCCGATCGCATGCTGGACATGGGTTTCGAGCCCCA
GATCCGCAAGATCATCTCCCAGATTCGCCCTGACCGTCAGACCTGCATGT
GGTCCGCTACATGGCCCAAGGAGGTCCGTCAGCTTGCGTCTGACTTCCTC
AACGACTACATCCAGGTTAACATTGGTTCCATGGATCTGTCGGCCAACCA
CCGTATCACTCAGATCGTCGAGGTCGTCTCGGACTTCGAGAAGCGCGACA
AGATGATCAAGCACCTCGAGAAGATCATGGAGAACCGTGCCAACAAGTGC
CTTATCTTCACCGGCACCAAGCGCATCGCTGACGAAATCACTCGCTTCCT
CCGCCAGGACGGATGGCCGGCACTTTTAGACTCCAAGCAGGCTCGTGACT
TGGTCACCATTCTCACTGAGGCCAAGCAGCAGATTGACCCCCGTCTCGCC
GAGATGATGTGCGCGACATCACACACGTTCTCAACTATGACTACCCCAAC
AACTCGGAGGACTACGTTCACCGTATTGGTAGAACTGGTCGTGCCGGTGC
TAAGGGTACCGCCATCACCTTCTTTACCACTGACACTATTCACGGTGATA
AGCAACAGCAAGAAAGAGATTGGGTCTTGAACGAGTTCAAGACGGGCAAG
AGCCCAATCATGGTGGCTACTGATGTGGCTTCCCGTGGTATCGATGTCCA
ACCTGGGCGCCGGTCTGAAGAAGCAGGAATGGGATCTTGACTCCCTGCCC
AAGTTCGAGAAGTCCTTCTACAAGGAACACGCCGATGTCGCCGAGCGCTC
TCAGCGTGATGTTGACGAGTTCCGTAAGAAGCACGAGATGGCTGTTCAGG
GAAGAAACGTCCCTCGCCCTGTCGAGACCTTCGACGAGGCCGGTTTCCCT
CAATACGTTCTCAGCGAGGTCAAGGCCCAGGGCTTCGACCGCCCTACCGC
TATTCAGTCTCAGGGTTGGCCCATGGCCCTCTCTGGTCGCGACGTTGTCG
GTATCGCTGAGACGGGTTCCGGAAAGACCCTGACCTACTGTCTTCCTGCC
ATTGTTCACATCAACGCCCAGCCCCTCCTCGCCCCCGGTGACGGCCCCAT
TGTCCTTATCCTCGCCCCCACCCGTGAATTGGCCGTTCAGATTCAAGCCG
AAATCTCCAAGTTCGGAAAGTCTTCCCGTATCCGCAACACCTGTGTCTAC
GGTGGTGTCCCCAAGGGTCCTCAGATCCGTGACCTGAGCCGTGGTGTGGA
AGTCTGCATTGCGACTCCCGGTCGTCTGATTGACATGCTCGAGGCTGGTC
GCACCAACCTTCGTCGTGTCACCTACCTCGTTCTGGATGAGGCCGATCGC
ATGCTGGACATGGGTTTCGAGCCCCAGATCCGCAAGATCATCTCCCAGAT
TCGCCCTGACCGTCAGACCTGCATGTGGTCCGCTACATGGCCCAAGGAGG
TCCGTCAGCTTGCGTCTGACTTCCTCAACGACTACATCCAGGTTAACATT
GGTTCCATGGATCTGTCGGCCAACCACCGTATCACTCAGATCGTCGAGGT
CGTCTCGGACTTCGAGAAGCGCGACAAGATGATCAAGCACCTCGAGAAGA
TCATGGAGAACCGTGCCAACAAGTGCCTTATCTTCACCGGCACCAAGCGC
ATCGCTGACGAAATCACTCGCTTCCTCCGCCAGGACGGATGGCCGGCACT
TTTAGACTCCAAGCAGGCTCGTGACTTGGTCACCATTCTCACTGAGGCCA
AGCAGCAGATTGACCCCCGTCTCGCCGAGATGATGTGCGCGACATCACAC
ACGTTCTCAACTATGACTACCCCAACAACTCGGAGGACTACGTTCACCGT
ATTGGTAGAACTGGTCGTGCCGGTGCTAAGGGTACCGCCATCACCTTCTT
TACCACTGACACTATTCACGGTGATAAGCAACAGCAAGAAAGAGATTGGG
TCTTGAACGAGTTCAAGACGGGCAAGAGCCCAATCATGGTGGCTACTGAT
GTGGCTTCCCGTGGTATCGATGTCCAACCTGGGCGCCGGTCTGAAGAAGC
AGGAATGGGATCTTGACTCCCTGCCCAAGTTCGAGAAGTCCTTCTACAAG
GAACACGCCGATGTCGCCGAGCGCTCTCAGCGTGATGTTGACGAGTTCCG
TAAGAAGCACGAGATGGCTGTTCAGGGAAGAAACGTCCCTCGCCCTGTCG
AGACCTTCGACGAGGCCGGTTTCCCTCAATACGTTCTCAGCGAGGTCAAG
GCCCAGGGCTTCGACCGCCCTACCGCTATTCAGTCTCAGGGTTGGCCCAT
GGCCCTCTCTGGTCGCGACGTTGTCGGTATCGCTGAGACGGGTTCCGGAA
AGACCCTGACCTACTGTCTTCCTGCCATTGTTCACATCAACGCCCAGCCC
CTCCTCGCCCCCGGTGACGGCCCCATTGTCCTTATCCTCGCCCCCACCCG
TGAATTGGCCGTTCAGATTCAAGCCGAAATCTCCAAGTTCGGAAAGTCTT
CCCGTATCCGCAACACCTGTGTCTACGGTGGTGTCCCCAAGGGTCCTCAG
ATCCGTGACCTGAGCCGTGGTGTGGAAGTCTGCATTGCGACTCCCGGTCG
TCTGATTGACATGCTCGAGGCTGGTCGCACCAACCTTCGTCGTGTCACCT
ACCTCGTTCTGGATGAGGCCGATCGCATGCTGGACATGGGTTTCGAGCCC
CAGATCCGCAAGATCATCTCCCAGATTCGCCCTGACCGTCAGACCTGCAT
GTGGTCCGCTACATGGCCCAAGGAGGTCCGTCAGCTTGCGTCTGACTTCC
TCAACGACTACATCCAGGTTAACATTGGTTCCATGGATCTGTCGGCCAAC
CACCGTATCACTCAGATCGTCGAGGTCGTCTCGGACTTCGAGAAGCGCGA
CAAGATGATCAAGCACCTCGAGAAGATCATGGAGAACCGTGCCAACAAGT
GCCTTATCTTCACCGGCACCAAGCGCATCGCTGACGAAATCACTCGCTTC
CTCCGCCAGGACGGATGGCCGGCACTTTTAGACTCCAAGCAGGCTCGTGA
CTTGGTCACCATTCTCACTGAGGCCAAGCAGCAGATTGACCCCCGTCTCG
CCGAGATGATGTGCGCGACATCACACACGTTCTCAACTATGACTACCCCA
ACAACTCGGAGGACTACGTTCACCGTATTGGTAGAACTGGTCGTGCCGGT
GCTAAGGGTACCGCCATCACCTTCTTTACCACTGACACTATTCACGGTGA
TAAGCAACAGCAAGAAAGAGATTGGGTCTTGAACGAGTTCAAGACGGGCA
AGAGCCCAATCATGGTGGCTACTGATGTGGCTTCCCGTGGTATCGATGTC
CAACCTGGGCGCCGGTCTGAAGAAGCAGGAATGGGATCTTGACTCCCTGC
CCAAGTTCGAGAAGTCCTTCTACAAGGAACACGCCGATGTCGCCGAGCGC
TCTCAGCGTGATGTTGACGAGTTCCGTAAGAAGCACGAGATGGCTGTTCA
GGGAAGAAACGTCCCTCGCCCTGTCGAGACCTTCGACGAGGCCGGTTTCC
CTCAATACGTTCTCAGCGAGGTCAAGGCCCAGGGCTTCGACCGCCCTACC
GCTATTCAGTCTCAGGGTTGGCCCATGGCCCTCTCTGGTCGCGACGTTGT
CGGTATCGCTGAGACGGGTTCCGGAAAGACCCTGACCTACTGTCTTCCTG
CCATTGTTCACATCAACGCCCAGCCCCTCCTCGCCCCCGGTGACGGCCCC
ATTGTCCTTATCCTCGCCCCCACCCGTGAATTGGCCGTTCAGATTCAAGC
CGAAATCTCCAAGTTCGGAAAGTCTTCCCGTATCCGCAACACCTGTGTCT
ACGGTGGTGTCCCCAAGGGTCCTCAGATCCGTGACCTGAGCCGTGGTGTG
GAAGTCTGCATTGCGACTCCCGGTCGTCTGATTGACATGCTCGAGGCTGG
TCGCACCAACCTTCGTCGTGTCACCTACCTCGTTCTGGATGAGGCCGATC
GCATGCTGGACATGGGTTTCGAGCCCCAGATCCGCAAGATCATCTCCCAG
ATTCGCCCTGACCGTCAGACCTGCATGTGGTCCGCTACATGGCCCAAGGA
GGTCCGTCAGCTTGCGTCTGACTTCCTCAACGACTACATCCAGGTTAACA
TTGGTTCCATGGATCTGTCGGCCAACCACCGTATCACTCAGATCGTCGAG
GTCGTCTCGGACTTCGAGAAGCGCGACAAGATGATCAAGCACCTCGAGAA
GATCATGGAGAACCGTGCCAACAAGTGCCTTATCTTCACCGGCACCAAGC
GCATCGCTGACGAAATCACTCGCTTCCTCCGCCAGGACGGATGGCCGGCA
CTTTTAGACTCCAAGCAGGCTCGTGACTTGGTCACCATTCTCACTGAGGC
CAAGCAGCAGATTGACCCCCGTCTCGCCGAGATGATGTGCGCGACATCAC
ACACGTTCTCAACTATGACTACCCCAACAACTCGGAGGACTACGTTCACC
GTATTGGTAGAACTGGTCGTGCCGGTGCTAAGGGTACCGCCATCACCTTC
TTTACCACTGACACTATTCACGGTGATAAGCAACAGCAAGAAAGAGATTG
GGTCTTGAACGAGTTCAAGACGGGCAAGAGCCCAATCATGGTGGCTACTG
ATGTGGCTTCCCGTGGTATCGATGTCCAACCTGGGCGCCGGTCTGAAGAA
GCAGGAATGGGATCTTGACTCCCTGCCCAAGTTCGAGAAGTCCTTCTACA
AGGAACACGCCGATGTCGCCGAGCGCTCTCAGCGTGATGTTGACGAGTTC
CGTAAGAAGCACGAGATGGCTGTTCAGGGAAGAAACGTCCCTCGCCCTGT
CGAGACCTTCGACGAGGCCGGTTTCCCTCAATACGTTCTCAGCGAGGTCA
AGGCCCAGGGCTTCGACCGCCCTACCGCTATTCAGTCTCAGGGTTGGCCC
ATGGCCCTCTCTGGTCGCGACGTTGTCGGTATCGCTGAGACGGGTTCCGG
AAAGACCCTGACCTACTGTCTTCCTGCCATTGTTCACATCAACGCCCAGC
CCCTCCTCGCCCCCGGTGACGGCCCCATTGTCCTTATCCTCGCCCCCACC
CGTGAATTGGCCGTTCAGATTCAAGCCGAAATCTCCAAGTTCGGAAAGTC
TTCCCGTATCCGCAACACCTGTGTCTACGGTGGTGTCCCCAAGGGTCCTC
AGATCCGTGACCTGAGCCGTGGTGTGGAAGTCTGCATTGCGACTCCCGGT
CGTCTGATTGACATGCTCGAGGCTGGTCGCACCAACCTTCGTCGTGTCAC
CTACCTCGTTCTGGATGAGGCCGATCGCATGCTGGACATGGGTTTCGAGC
CCCAGATCCGCAAGATCATCTCCCAGATTCGCCCTGACCGTCAGACCTGC
ATGTGGTCCGCTACATGGCCCAAGGAGGTCCGTCAGCTTGCGTCTGACTT
CCTCAACGACTACATCCAGGTTAACATTGGTTCCATGGATCTGTCGGCCA
ACCACCGTATCACTCAGATCGTCGAGGTCGTCTCGGACTTCGAGAAGCGC
GACAAGATGATCAAGCACCTCGAGAAGATCATGGAGAACCGTGCCAACAA
GTGCCTTATCTTCACCGGCACCAAGCGCATCGCTGACGAAATCACTCGCT
TCCTCCGCCAGGACGGATGGCCGGCACTTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | ATP-dependent RNA helicase dbp2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3098504..3101280 - |
|
