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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1056411..1057652- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5490-T1 ID=CAN33_5490-T1|Name=CAN33_5490-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1242bp|location=Sequence derived from alignment at NKJJ01000019.1:1056411..1057652- (Aspergillus niger FDAARGOS_311)
ATGTCGCAGAGTACGAATGGTGGCACGTGGGTGGTTGCTAACATCACGGC
CCCCGAGGCTGGTCCCGGGGCTGCGGAGCAGATGGAGGCGATCGCGCAGA
AGATTGAGGCGATACTGGCTTCTACGCGGCATGAGGATGGAAGTGTGCCT
CGTACTACGGCTGATATTATCTTTACGACGGTGCTGCTACGCTCGATGGC
GGACTTTGCCTTGATGAATGGCATCTACGTTTCCTTGTTCAAGAAGCCGA
ATCCTCCGGCCAGAGCTACGGTGGCTTGCGGCGAGAGTCTGCCGGAGGGC
GTGAAGGTCATGATATCGGCGGTGGTGGACTTGGGTCCTAGGGAGCAAAG
GCAGGGCCTTCATGTCCAGTCTCGTTCTTACTGGGCGCCGGCTAATATTG
GCCCATATTCGCAAGCCATGTCGGTTCCGGTACAGGGTTCGGAGCACATG
GTTTACATTGCCGGACAGATTCCGCTGGAGCCGGCTTCGATGGAGATGAT
GAGTGCCTCTGGGGAAGCCCTGACGCGGCCGTGGATCGAGAACTATACCA
CGCGAGCGGTGCTCTCCTTGCAGCATCTCTGGAGGATTGGTCACGCCATG
GAAGTTGACTGGTGGCTGGGGGCCGTTGCTTTCTTAACGGGAGGAGAGCA
TATTGAGACGCAGGCCCGGCTAGCATGGAACATCTGGGAGCGGATGCATG
CTCGTCAGGAACAAGAAGACGACGAGGACGGAGAATCAGGCCTGGATGTT
TGGGATATCAAGTATGGAGGCCGTGCGCACGAGCAAGCAACGGGTCCATC
AACACCTAACTTGCCTAACTTTGGGGTGGTCCAGTCAGACGCCTTAGTTC
CTGCGTTTTTCGCGGTCCAGATTGAAGAGCTCCCACGAGGAAGTGATATC
GAATGGCAGGGTCTGGGGTACAGATGTGGTGGATTGCGGATGGCTGCAGA
AGAAACGGACTATGGCCGCAAGACCACAGTGTCCACGGAGCAGAACCTCA
GTTACATCGGCATTGAGATCGACATGGAACAACTGGGGTCTGATCTGGAC
TCGTATCTGCAGGACAAGCTGCAGAAGCTGCCAGAGTTGGTAGAAGGTTC
CCACGCGATCATCTATACCAGTCAGCCATTGTCCAAGCCTGCATTCCCAG
CGCAAATTGTTCCCTGCAAATCTGTCTGGGGGCCGAAAGGACGAGAATTG
GCAGCAGGTGTCATTATACAGAGACACGCCCCGGCATTATAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1056411..1057652- >CAN33_5490-T1 ID=CAN33_5490-T1|Name=CAN33_5490-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1242bp|location=Sequence derived from alignment at NKJJ01000019.1:1056411..1057652- (Aspergillus niger FDAARGOS_311)
ATGTCGCAGAGTACGAATGGTGGCACGTGGGTGGTTGCTAACATCACGGC
CCCCGAGGCTGGTCCCGGGGCTGCGGAGCAGATGGAGGCGATCGCGCAGA
AGATTGAGGCGATACTGGCTTCTACGCGGCATGAGGATGGAAGTGTGCCT
CGTACTACGGCTGATATTATCTTTACGACGGTGCTGCTACGCTCGATGGC
GGACTTTGCCTTGATGAATGGCATCTACGTTTCCTTGTTCAAGAAGCCGA
ATCCTCCGGCCAGAGCTACGGTGGCTTGCGGCGAGAGTCTGCCGGAGGGC
GTGAAGGTCATGATATCGGCGGTGGTGGACTTGGGTCCTAGGGAGCAAAG
GCAGGGCCTTCATGTCCAGTCTCGTTCTTACTGGGCGCCGGCTAATATTG
GCCCATATTCGCAAGCCATGTCGGTTCCGGTACAGGGTTCGGAGCACATG
GTTTACATTGCCGGACAGATTCCGCTGGAGCCGGCTTCGATGGAGATGAT
GAGTGCCTCTGGGGAAGCCCTGACGCGGCCGTGGATCGAGAACTATACCA
CGCGAGCGGTGCTCTCCTTGCAGCATCTCTGGAGGATTGGTCACGCCATG
GAAGTTGACTGGTGGCTGGGGGCCGTTGCTTTCTTAACGGGAGGAGAGCA
TATTGAGACGCAGGCCCGGCTAGCATGGAACATCTGGGAGCGGATGCATG
CTCGTCAGGAACAAGAAGACGACGAGGACGGAGAATCAGGCCTGGATGTT
TGGGATATCAAGTATGGAGGCCGTGCGCACGAGCAAGCAACGGGTCCATC
AACACCTAACTTGCCTAACTTTGGGGTGGTCCAGTCAGACGCCTTAGTTC
CTGCGTTTTTCGCGGTCCAGATTGAAGAGCTCCCACGAGGAAGTGATATC
GAATGGCAGGGTCTGGGGTACAGATGTGGTGGATTGCGGATGGCTGCAGA
AGAAACGGACTATGGCCGCAAGACCACAGTGTCCACGGAGCAGAACCTCA
GTTACATCGGCATTGAGATCGACATGGAACAACTGGGGTCTGATCTGGAC
TCGTATCTGCAGGACAAGCTGCAGAAGCTGCCAGAGTTGGTAGAAGGTTC
CCACGCGATCATCTATACCAGTCAGCCATTGTCCAAGCCTGCATTCCCAG
CGCAAATTGTTCCCTGCAAATCTGTCTGGGGGCCGAAAGGACGAGAATTG
GCAGCAGGTGTCATTATACAGAGACACGCCCCGGCATTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006175 |
| DBxref | InterPro:IPR035959 |
| DBxref | PFAM:PF01042 |
| Product | Endoribonuclease L-PSP family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1056411..1057652 - |
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