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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3184971..3186016- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54960-T1 ID=CAN33_54960-T1|Name=CAN33_54960-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1046bp|location=Sequence derived from alignment at NKJJ01000020.1:3184971..3186016- (Aspergillus niger FDAARGOS_311)
ATGGCGACCACGTTGGCTGATCACAAACGTCCTCAATTACAGCCCGTATG
CCAGAATTGCGGCACTTCTACGACACCTCTCTGGCGCAGGGACGAACTCG
GCTCCGTCCTTTGCAACGCCTGTGGCTTGTTCCTCAAACTACATGGCAGG
CCCCGTCCGATAAGCTTAAAGACCGATGTCATCAAAAGTCGCAACCGGGT
CAAGACTGCTGGTCAGGGCCCCAAGCGTAAGGTGAGTCTGTCGTCTAGAA
AATTTTTCCCTGGCTGTCCTATGTCTTTGTACACCTGAGATAACGATCGC
TAACATTCCTATCAATGTCTTATCAGTCCGGCGGTGCTATCGATACGAAT
GGCTTGTCTACCTCGAGGTCCGAAGCTGGGACGCCCCCCATGGGGTCCCA
AGGATACCGTCGCGCGTCGCGGAAGGCATCACCGGGCCATTCCGACCGAT
CCAACTCACCCGTCTCCCGTACCGAAACGCCTGGTATCCCTTCCATGCAG
CAACCACACCCTCAGTCGCAACACAATGCCAACATTGCGCCTCAGCACAT
GTTCGATAGCGTCACAATCGGCGACCATGGGCTCAATCAGCCGAATGCGC
TGCCCTCGGTGCAGCCACGCCAGCCGTCGCCCACGGCGACCTCGGCGGCT
GTCGACCGCCATCTCGAGTCACCACAGACATACGATGGACTGCTCGCAGC
CAATACCTCGTTGAAGACTCGCGTGAGCGAATTGGAGTTTATCAATGAAC
TGTTCCGGGGCCGGGTGACGGAACTGGAGCAGAGCGGCGCGACTGCGCGC
CGATCGGAGATGATCGTCCGGGACTCGGAGGTACGGCTCCGGCGGTCTCT
GGAGGAGGCCCAACGGCGCGAAGACGATCTGAAACGGAGGATATCTGAGC
TGGAGCGACAGCTTACCGACCAAACCTCCTCTGCCAACCCGGCGGGCAAT
GACAGTCCCGGCGAGCCGCTGGCCAAGCGGATGCGGCTGTCCGACGTCGT
GGAGCAACCTGCGGAGTCGCCAACAAAATCCCCCAAGAGTGTCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3184971..3186016- >CAN33_54960-T1 ID=CAN33_54960-T1|Name=CAN33_54960-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1902bp|location=Sequence derived from alignment at NKJJ01000020.1:3184971..3186016- (Aspergillus niger FDAARGOS_311)
TCCGGCGGTGCTATCGATACGAATGGCTTGTCTACCTCGAGGTCCGAAGC
TGGGACGCCCCCCATGGGGTCCCAAGGATACCGTCGCGCGTCGCGGAAGG
CATCACCGGGCCATTCCGACCGATCCAACTCACCCGTCTCCCGTACCGAA
ACGCCTGGTATCCCTTCCATGCAGCAACCACACCCTCAGTCGCAACACAA
TGCCAACATTGCGCCTCAGCACATGTTCGATAGCGTCACAATCGGCGACC
ATGGGCTCAATCAGCCGAATGCGCTGCCCTCGGTGCAGCCACGCCAGCCG
TCGCCCACGGCGACCTCGGCGGCTGTCGACCGCCATCTCGAGTCACCACA
GACATACGATGGACTGCTCGCAGCCAATACCTCGTTGAAGACTCGCGTGA
GCGAATTGGAGTTTATCAATGAACTGTTCCGGGGCCGGGTGACGGAACTG
GAGCAGAGCGGCGCGACTGCGCGCCGATCGGAGATGATCGTCCGGGACTC
GGAGGTACGGCTCCGGCGGTCTCTGGAGGAGGCCCAACGGCGCGAAGACG
ATCTGAAACGGAGGATATCTGAGCTGGAGCGACAGCTTACCGACCAAACC
TCCTCTGCCAACCCGGCGGGCAATGACAGTCCCGGCGAGCCGCTGGCCAA
GCGGATGCGGCTGTCCGACGTCGTGGAGCAACCTGCGGAGTCGCCAACAA
AATCCCCCAAGAGTGTCTAAATGGCGACCACGTTGGCTGATCACAAACGT
CCTCAATTACAGCCCGTATGCCAGAATTGCGGCACTTCTACGACACCTCT
CTGGCGCAGGGACGAACTCGGCTCCGTCCTTTGCAACGCCTGTGGCTTGT
TCCTCAAACTACATGGCAGGCCCCGTCCGATAAGCTTAAAGACCGATGTC
ATCAAAAGTCGCAACCGGGTCAAGACTGCTGGTCAGGGCCCCAAGCGTAA
GTCCGGCGGTGCTATCGATACGAATGGCTTGTCTACCTCGAGGTCCGAAG
CTGGGACGCCCCCCATGGGGTCCCAAGGATACCGTCGCGCGTCGCGGAAG
GCATCACCGGGCCATTCCGACCGATCCAACTCACCCGTCTCCCGTACCGA
AACGCCTGGTATCCCTTCCATGCAGCAACCACACCCTCAGTCGCAACACA
ATGCCAACATTGCGCCTCAGCACATGTTCGATAGCGTCACAATCGGCGAC
CATGGGCTCAATCAGCCGAATGCGCTGCCCTCGGTGCAGCCACGCCAGCC
GTCGCCCACGGCGACCTCGGCGGCTGTCGACCGCCATCTCGAGTCACCAC
AGACATACGATGGACTGCTCGCAGCCAATACCTCGTTGAAGACTCGCGTG
AGCGAATTGGAGTTTATCAATGAACTGTTCCGGGGCCGGGTGACGGAACT
GGAGCAGAGCGGCGCGACTGCGCGCCGATCGGAGATGATCGTCCGGGACT
CGGAGGTACGGCTCCGGCGGTCTCTGGAGGAGGCCCAACGGCGCGAAGAC
GATCTGAAACGGAGGATATCTGAGCTGGAGCGACAGCTTACCGACCAAAC
CTCCTCTGCCAACCCGGCGGGCAATGACAGTCCCGGCGAGCCGCTGGCCA
AGCGGATGCGGCTGTCCGACGTCGTGGAGCAACCTGCGGAGTCGCCAACA
AAATCCCCCAAGAGTGTCTAAATGGCGACCACGTTGGCTGATCACAAACG
TCCTCAATTACAGCCCGTATGCCAGAATTGCGGCACTTCTACGACACCTC
TCTGGCGCAGGGACGAACTCGGCTCCGTCCTTTGCAACGCCTGTGGCTTG
TTCCTCAAACTACATGGCAGGCCCCGTCCGATAAGCTTAAAGACCGATGT
CATCAAAAGTCGCAACCGGGTCAAGACTGCTGGTCAGGGCCCCAAGCGTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043565 | sequence-specific DNA binding |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013088 |
| DBxref | InterPro:IPR000679 |
| DBxref | PFAM:PF00320 |
| Product | GATA zinc finger family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3184971..3186016 - |
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