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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3196344..3197007- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54975-T1 ID=CAN33_54975-T1|Name=CAN33_54975-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=664bp|location=Sequence derived from alignment at NKJJ01000020.1:3196344..3197007- (Aspergillus niger FDAARGOS_311)
ATGGCAGACATCTTAACCCAACTTCAAACCTGCCTCGACCAGGTACATCC
CCCATCCCATTACCCTCACCCTCAACACCAACACCAGCCACACCCAACTA
ACTCTAAAACCACAGCTCGCAACCCAATTCTACGCGACTCTATGCTACCT
AACGACCTACCACGACAACATCCCCGCGACGCCGCCTCCCACAAGCACAA
CCCCCAGCGCTGCGCCCCTACTGGCAAAAATCCCCAAGAACGCATCTACC
CCCCCGGTCCCAGCGTCCGCGCCCCAAGCAGCACAATCCCAATCGCAAGC
GTCGCCACCACCACCCGACACCACAAATCCCCAAACCGGAGGGCAGAATG
CAGATCAACAGCAACAAAGCCCAGATGGTGAAGGTCTCCCTGCGCCGGAC
AGCCCCGCTACATTTGCAGCCAGACAACGGGAACTAGCGCGCGATCTCGT
CATCAAGGAGCAGCAGATCGAGTACTTGATTAGTGTGCTGCCGGGGATAG
ATAGTAGTGAGGCGGAGCAGGAGAGGCGGATCCGGGAGCTGGAGGGGGAG
TTGAGGATTGTGGAGGGGGTGAGGGAGGAGAGGAGACGCGAGTTGGGGGT
GTTGAGGAGGAGGTTGGAGGGTGTTTTGGGGGTGGTGGAGAGGGGGATTT
ATTCTAGGGATTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3196344..3197007- >CAN33_54975-T1 ID=CAN33_54975-T1|Name=CAN33_54975-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1638bp|location=Sequence derived from alignment at NKJJ01000020.1:3196344..3197007- (Aspergillus niger FDAARGOS_311)
GGATTAGCTCGCAACCCAATTCTACGCGACTCTATGCTACCTAACGACCT
ACCACGACAACATCCCCGCGACGCCGCCTCCCACAAGCACAACCCCCAGC
GCTGCGCCCCTACTGGCAAAAATCCCCAAGAACGCATCTACCCCCCCGGT
CCCAGCGTCCGCGCCCCAAGCAGCACAATCCCAATCGCAAGCGTCGCCAC
CACCACCCGACACCACAAATCCCCAAACCGGAGGGCAGAATGCAGATCAA
CAGCAACAAAGCCCAGATGGTGAAGGTCTCCCTGCGCCGGACAGCCCCGC
TACATTTGCAGCCAGACAACGGGAACTAGCGCGCGATCTCGTCATCAAGG
AGCAGCAGATCGAGTACTTGATTAGTGTGCTGCCGGGGATAGATAGTAGT
GAGGCGGAGCAGGAGAGGCGGATCCGGGAGCTGGAGGGGGAGTTGAGGAT
TGTGGAGGGGGTGAGGGAGGAGAGGAGACGCGAGTTGGGGGTGTTGAGGA
GGAGATGGCAGACATCTTAACCCAACTTCAAACCTGCCTCGACCAGGGAT
TAGCTCGCAACCCAATTCTACGCGACTCTATGCTACCTAACGACCTACCA
CGACAACATCCCCGCGACGCCGCCTCCCACAAGCACAACCCCCAGCGCTG
CGCCCCTACTGGCAAAAATCCCCAAGAACGCATCTACCCCCCCGGTCCCA
GCGTCCGCGCCCCAAGCAGCACAATCCCAATCGCAAGCGTCGCCACCACC
ACCCGACACCACAAATCCCCAAACCGGAGGGCAGAATGCAGATCAACAGC
AACAAAGCCCAGATGGTGAAGGTCTCCCTGCGCCGGACAGCCCCGCTACA
TTTGCAGCCAGACAACGGGAACTAGCGCGCGATCTCGTCATCAAGGAGCA
GCAGATCGAGTACTTGATTAGTGTGCTGCCGGGGATAGATAGTAGTGAGG
CGGAGCAGGAGAGGCGGATCCGGGAGCTGGAGGGGGAGTTGAGGATTGTG
GAGGGGGTGAGGGAGGAGAGGAGACGCGAGTTGGGGGTGTTGAGGAGGAG
ATGGCAGACATCTTAACCCAACTTCAAACCTGCCTCGACCAGGGATTAGC
TCGCAACCCAATTCTACGCGACTCTATGCTACCTAACGACCTACCACGAC
AACATCCCCGCGACGCCGCCTCCCACAAGCACAACCCCCAGCGCTGCGCC
CCTACTGGCAAAAATCCCCAAGAACGCATCTACCCCCCCGGTCCCAGCGT
CCGCGCCCCAAGCAGCACAATCCCAATCGCAAGCGTCGCCACCACCACCC
GACACCACAAATCCCCAAACCGGAGGGCAGAATGCAGATCAACAGCAACA
AAGCCCAGATGGTGAAGGTCTCCCTGCGCCGGACAGCCCCGCTACATTTG
CAGCCAGACAACGGGAACTAGCGCGCGATCTCGTCATCAAGGAGCAGCAG
ATCGAGTACTTGATTAGTGTGCTGCCGGGGATAGATAGTAGTGAGGCGGA
GCAGGAGAGGCGGATCCGGGAGCTGGAGGGGGAGTTGAGGATTGTGGAGG
GGGTGAGGGAGGAGAGGAGACGCGAGTTGGGGGTGTTGAGGAGGAGATGG
CAGACATCTTAACCCAACTTCAAACCTGCCTCGACCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265SHM |
| DBxref | InterPro:IPR037212 |
| DBxref | InterPro:IPR021384 |
| DBxref | PFAM:PF11221 |
| Product | RNA polymerase II mediator complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3196344..3197007 - |
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