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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3242256..3244221- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_55050-T1 ID=CAN33_55050-T1|Name=CAN33_55050-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1966bp|location=Sequence derived from alignment at NKJJ01000020.1:3242256..3244221- (Aspergillus niger FDAARGOS_311)
ATGACACCCCTCGACCGCCCTCTGGCCCGCCCATGGTATGAAGACTATTC
GGAGGAAGAGATTGAACGCGATGAAAACGATGAAATAATTATACCCCGGC
ACAGAGTCCTTGACTTGTATGAGCTCCTCGGTGTCGATGACAAAGCGACT
CAAGACCAAATCAGAGCTGCCTATAAGAAGAAGGCGCTGAAGCATCATCC
TGGTGCGTATATACTTCACTTTACTCTTATCTATCTATCACTGCTGTGGA
ATGTACAGTCTAACCACCAGCACCAGACAAGGCACCCCCGAGCAAAAAAG
AAGAAGCAAACACCAAATTCCAACAGATCGCCTATGCCTACGCCGTCCTT
TCCGATGAACGTCGCCGCGAGATATTCGATCGCACCGGTAGCACGGAGGA
AGCCTTGCAAGAAGATGATGGATTCGACTGGATGGAGTTCTACCGGGAGC
AGTTCGCGACCGCCATCGACGTCGATGCGATCGACAAGCTCAAGCAGGAA
TATCAGGGGTCCGAGGAAGAGGTCAACGATATACTCCAGGCCTATGAACT
TCACCGGGGCGATATGGATAGAATCTACGAGTCGGTGATGCTGTGTAATG
TCATTGATGATGATGAGCGATTCCGTGCCATCATTGACTCGGCTATTGCG
GATGGAAGGGCTCAGGAGTACAAGAAATACACAGAGGAGCCGGTCAAGAA
GCGTCAAGCCAGATTGAAGCGGGCACTGAAGGAAGCGAAGGAGGCGGAAC
AATTGGGCAAGGAGATCGAGGAGAACAAGTCTAAGACGGGTAGGAAGAAC
CAAGGGGGGAGGAAGAAGAAGGGTGGCCCCGAGGACGTGGGTGACTTGGC
TGCGATGATTAAACAACGAAACCTCTCCCGTCTTGACGTCCTCTGCCATC
AACTGGAGGAGAAGTATGACGTGGACAGTAAGCTTAATCCTCTGGAGCCG
AGGAGGAAGCGGAGGTCGAGTCCTCCTGAGGAGGCCTTCAAGGCTATGGC
TGCGCGTGGGGAGAAAAAGAAGAAGCAGAAGAGGACCAAGGGGTGAGGTG
TGTTATCCTTGGGTGGATTGTCTCTTTATGCGTTATTTTTTTATCACTAC
TACTTATCTTTGAGGTTGGGAGTTCAGGTCATGTAGGGACAGAGCCCTTT
GCAGCATGGTACATTGAGTTATTTGGCAGTCAGGCATGGGAATGCATTGT
TTTTGTTTTTTTTGTTTTTCATTCAATTCCTTTTTCACATTGGGTTTTAT
TTCTGAATTCTGCACTTTGCTACCATTGAGTGCCCAATACACAGTAGTAG
TGCTGGCAGTAATAAAACAGACATACCTTGTTGACCGCTAGTAATTGAGA
AGGAGGTGCTGAAGGGGCAAAGGAGAGAACGTGACCATGACAGCTTCGGC
CGTGATTGAAGGAACAAACACCTCACATTGAGCATAATTAAGCAGCCGGT
CTACTGCATCCTGCGTACACAGCTCCACCTCGATTGGTGAAGAATCGATG
GGTTCGCATTCCAGCTGCATCCAGGCAGGAGTGCAAGTGTGAGACTAACA
GCCAACCGATCCTCCCCCCAGGATGATCGCCAGCATCAAGCCCTGGGGAG
GGCCAATGCAAGGGATGCTCATCACCGGTTGGTGGCACCTTGCACCACCT
GGTCACCGTGATTGATCGTGCTTCGTTGCTTTATAAGGATCAGCCAGCTT
GCTCGCCTCTTGTTCGTGATACCCCGCCATGCCGAGCTTTGGACGCCTTG
GCTTGTTCCAACTTGGTCGTCTTGCCTTCCTCCTTCTTCCTCTTCTTCAT
CCTCCCCCACAGCTGGGTGATGCTGTCTATCCTTCTTCATTTCTCTTCAC
AGCTGTTCACCATCTACGGAGACATCCGAGCTGTTTCTCATCTCCGTCGG
CTTGCTGGCCAGACGCCAGCACTCCTCCTCCTCTCTTCGGCATCATCCGA
GGTAGACAAGCACTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3242256..3244221- >CAN33_55050-T1 ID=CAN33_55050-T1|Name=CAN33_55050-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3942bp|location=Sequence derived from alignment at NKJJ01000020.1:3242256..3244221- (Aspergillus niger FDAARGOS_311)
CATCAAGCCCTGGGGAGGGCCAATGCAAGGGATGCTCATCACCGGTTGGT
GGCACCTTGCACCACCTGGTCACCGTGATTGATCGTGCTTCGTTGCTTTA
TAAGGATCAGCCAGCTTGCTCGCCTCTTGTTCGTGATACCCCGCCATGCC
GAGCTTTGGACGCCTTGGCTTGTTCCAACTTGGTCGTCTTGCCTTCCTCC
TTCTTCCTCTTCTTCATCCTCCCCCACAGCTGGGTGATGCTGTCTATCCT
TCTTCATTTCTCTTCACAGCTGTTCACCATCTACGGAGACATCCGAGCTG
TTTCTCATCTCCGTCGGCTTGCTGGCCAGACGCCAGCACTCCTCCTCCTC
TCTTCGGCATCATCCGAGGTAGACAAGCACTGAACAAGGCACCCCCGAGC
AAAAAAGAAGAAGCAAACACCAAATTCCAACAGATCGCCTATGCCTACGC
CGTCCTTTCCGATGAACGTCGCCGCGAGATATTCGATCGCACCGGTAGCA
CGGAGGAAGCCTTGCAAGAAGATGATGGATTCGACTGGATGGAGTTCTAC
CGGGAGCAGTTCGCGACCGCCATCGACGTCGATGCGATCGACAAGCTCAA
GCAGGAATATCAGGGGTCCGAGGAAGAGGTCAACGATATACTCCAGGCCT
ATGAACTTCACCGGGGCGATATGGATAGAATCTACGAGTCGGTGATGCTG
TGTAATGTCATTGATGATGATGAGCGATTCCGTGCCATCATTGACTCGGC
TATTGCGGATGGAAGGGCTCAGGAGTACAAGAAATACACAGAGGAGCCGG
TCAAGAAGCGTCAAGCCAGATTGAAGCGGGCACTGAAGGAAGCGAAGGAG
GCGGAACAATTGGGCAAGGAGATCGAGGAGAACAAGTCTAAGACGGGTAG
GAAGAACCAAGGGGGGAGGAAGAAGAAGGGTGGCCCCGAGGACGTGGGTG
ACTTGGCTGCGATGATTAAACAACGAAACCTCTCCCGTCTTGACGTCCTC
TGCCATCAACTGGAGGAGAAGTATGACGTGGACAGTAAGCTTAATCCTCT
GGAGCCGAGGAGGAAGCGGAGGTCGAGTCCTCCTGAGGAGGCCTTCAAGG
CTATGGCTGCGCATGACACCCCTCGACCGCCCTCTGGCCCGCCCATGGTA
TGAAGACTATTCGGAGGAAGAGATTGAACGCGATGAAAACGATGAAATAA
TTATACCCCGGCACAGAGTCCTTGACTTGTATGAGCTCCTCGGTGTCGAT
GACAAAGCGACTCAAGACCAAATCAGAGCTGCCTATAAGAAGAAGGCGCT
GAAGCATCATCCTGCATCAAGCCCTGGGGAGGGCCAATGCAAGGGATGCT
CATCACCGGTTGGTGGCACCTTGCACCACCTGGTCACCGTGATTGATCGT
GCTTCGTTGCTTTATAAGGATCAGCCAGCTTGCTCGCCTCTTGTTCGTGA
TACCCCGCCATGCCGAGCTTTGGACGCCTTGGCTTGTTCCAACTTGGTCG
TCTTGCCTTCCTCCTTCTTCCTCTTCTTCATCCTCCCCCACAGCTGGGTG
ATGCTGTCTATCCTTCTTCATTTCTCTTCACAGCTGTTCACCATCTACGG
AGACATCCGAGCTGTTTCTCATCTCCGTCGGCTTGCTGGCCAGACGCCAG
CACTCCTCCTCCTCTCTTCGGCATCATCCGAGGTAGACAAGCACTGAACA
AGGCACCCCCGAGCAAAAAAGAAGAAGCAAACACCAAATTCCAACAGATC
GCCTATGCCTACGCCGTCCTTTCCGATGAACGTCGCCGCGAGATATTCGA
TCGCACCGGTAGCACGGAGGAAGCCTTGCAAGAAGATGATGGATTCGACT
GGATGGAGTTCTACCGGGAGCAGTTCGCGACCGCCATCGACGTCGATGCG
ATCGACAAGCTCAAGCAGGAATATCAGGGGTCCGAGGAAGAGGTCAACGA
TATACTCCAGGCCTATGAACTTCACCGGGGCGATATGGATAGAATCTACG
AGTCGGTGATGCTGTGTAATGTCATTGATGATGATGAGCGATTCCGTGCC
ATCATTGACTCGGCTATTGCGGATGGAAGGGCTCAGGAGTACAAGAAATA
CACAGAGGAGCCGGTCAAGAAGCGTCAAGCCAGATTGAAGCGGGCACTGA
AGGAAGCGAAGGAGGCGGAACAATTGGGCAAGGAGATCGAGGAGAACAAG
TCTAAGACGGGTAGGAAGAACCAAGGGGGGAGGAAGAAGAAGGGTGGCCC
CGAGGACGTGGGTGACTTGGCTGCGATGATTAAACAACGAAACCTCTCCC
GTCTTGACGTCCTCTGCCATCAACTGGAGGAGAAGTATGACGTGGACAGT
AAGCTTAATCCTCTGGAGCCGAGGAGGAAGCGGAGGTCGAGTCCTCCTGA
GGAGGCCTTCAAGGCTATGGCTGCGCATGACACCCCTCGACCGCCCTCTG
GCCCGCCCATGGTATGAAGACTATTCGGAGGAAGAGATTGAACGCGATGA
AAACGATGAAATAATTATACCCCGGCACAGAGTCCTTGACTTGTATGAGC
TCCTCGGTGTCGATGACAAAGCGACTCAAGACCAAATCAGAGCTGCCTAT
AAGAAGAAGGCGCTGAAGCATCATCCTGCATCAAGCCCTGGGGAGGGCCA
ATGCAAGGGATGCTCATCACCGGTTGGTGGCACCTTGCACCACCTGGTCA
CCGTGATTGATCGTGCTTCGTTGCTTTATAAGGATCAGCCAGCTTGCTCG
CCTCTTGTTCGTGATACCCCGCCATGCCGAGCTTTGGACGCCTTGGCTTG
TTCCAACTTGGTCGTCTTGCCTTCCTCCTTCTTCCTCTTCTTCATCCTCC
CCCACAGCTGGGTGATGCTGTCTATCCTTCTTCATTTCTCTTCACAGCTG
TTCACCATCTACGGAGACATCCGAGCTGTTTCTCATCTCCGTCGGCTTGC
TGGCCAGACGCCAGCACTCCTCCTCCTCTCTTCGGCATCATCCGAGGTAG
ACAAGCACTGAACAAGGCACCCCCGAGCAAAAAAGAAGAAGCAAACACCA
AATTCCAACAGATCGCCTATGCCTACGCCGTCCTTTCCGATGAACGTCGC
CGCGAGATATTCGATCGCACCGGTAGCACGGAGGAAGCCTTGCAAGAAGA
TGATGGATTCGACTGGATGGAGTTCTACCGGGAGCAGTTCGCGACCGCCA
TCGACGTCGATGCGATCGACAAGCTCAAGCAGGAATATCAGGGGTCCGAG
GAAGAGGTCAACGATATACTCCAGGCCTATGAACTTCACCGGGGCGATAT
GGATAGAATCTACGAGTCGGTGATGCTGTGTAATGTCATTGATGATGATG
AGCGATTCCGTGCCATCATTGACTCGGCTATTGCGGATGGAAGGGCTCAG
GAGTACAAGAAATACACAGAGGAGCCGGTCAAGAAGCGTCAAGCCAGATT
GAAGCGGGCACTGAAGGAAGCGAAGGAGGCGGAACAATTGGGCAAGGAGA
TCGAGGAGAACAAGTCTAAGACGGGTAGGAAGAACCAAGGGGGGAGGAAG
AAGAAGGGTGGCCCCGAGGACGTGGGTGACTTGGCTGCGATGATTAAACA
ACGAAACCTCTCCCGTCTTGACGTCCTCTGCCATCAACTGGAGGAGAAGT
ATGACGTGGACAGTAAGCTTAATCCTCTGGAGCCGAGGAGGAAGCGGAGG
TCGAGTCCTCCTGAGGAGGCCTTCAAGGCTATGGCTGCGCATGACACCCC
TCGACCGCCCTCTGGCCCGCCCATGGTATGAAGACTATTCGGAGGAAGAG
ATTGAACGCGATGAAAACGATGAAATAATTATACCCCGGCACAGAGTCCT
TGACTTGTATGAGCTCCTCGGTGTCGATGACAAAGCGACTCAAGACCAAA
TCAGAGCTGCCTATAAGAAGAAGGCGCTGAAGCATCATCCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018253 |
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF00226 |
| Product | DnaJ domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3242256..3244221 - |
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