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CAN33_55060-T1, CAN33_55060-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55060-T1
Unique NameCAN33_55060-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3245825..3247047-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55060-T1 ID=CAN33_55060-T1|Name=CAN33_55060-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1223bp|location=Sequence derived from alignment at NKJJ01000020.1:3245825..3247047- (Aspergillus niger FDAARGOS_311)
ATGGCCGCCCAACGCCAGGCCTCCTCCGCCTCCCAAACGCCCCTCATCTC
CCCAGCAGAGCTTTCCTACCTCTACACATCACTATCTCTCCCAGACGGCC
CTATCCGCCCCGATGGCCGCTCGCCCACGCAATTCCGCCCATTGACCGCA
GAAACAGACATTCTGCCGGGCACCAACGGTAGCGCGCGCGTTGGGTTCGC
CGACGGTACGCAAGCCATCGTGGGTGTGAAGGCTGAGGTGGAAAAGACCG
TTGTTGCGGCCGAAGCACTGAATCTATCGCAAAAAACGCAGGAAGATTAC
GCCGATAATGAAGGCGGAGAGGGCCAGAAAACATCCAGTCATGGCCATGG
CTCGTGGGTGCAGATGTCTATTGAGATCCCGGGTTTTCGGGATGATGATG
CCCTCCCGGTTTTCTTGTCGGAGATGATGCGCGAGCCGCTTGTTGAGTCG
GTCGCTGGAGGCGATGGAAAGGGTGAGGATGAGATGGCTGGGGGGTTGAA
GGGGAGGTTGGTTATTAATAAGAGGTGGCATTGGAGGTTGTATATTGATG
TGAGTGATTGCTTCTTTTCTGGTCGAGGGGGTAGGGGTGAGTGGTGCTAA
TGGTGTTCGTACAGGTGCTGCTGCTGTCGCAGCCTCTGTCGTATCCGCTG
CCGTTGCTGTCTTTGACGACTCATTTGGCTCTTTTGTCGACTAAGCTGCC
TAAGCTCAAGTCCAAGGGAGAAGAAGATCCCTTCTTCGATGATGATTGGA
ATGCCGCTGAATATCTATACCCCCGCTCGCAGTCTGGGCCTCGCCTATCT
TCTACGAAGCAGGTCCGGCCTCCTGTGACGCTGCTTGTTATTTCCGTGGG
CGATAATGTCATCTTTGATCCTAACAGGGAGGAAATCACTGTCGCGGATA
CTGTTCTGGCTGTTTCTATCACCCAGGATAGTGACTCGGATGGTCTGAAG
CTACTTTCTATTCGCACAGTCGACCCTCCGTCCCGTCTTACGCAGCCGGG
TGTGTCGAACTCGGAGAATGTGGCGACACTGGGTTCCACAGCAGCTGCGG
AAGAGGCGGCCATGACGGATCCGTCTACTGGCGAAGAGGTCGCGGGCGTT
TGGAGACCCCGACGGGGCGGTGTCAAACGGCGCACGATTGCAAAGATGCT
CAAGCTGGTCTTGCAGAAGGGAGGTGTTGGTGAAGAGGTCCTTGAGGGTC
TTGAGGGAGTCCAGGTGGGCTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:3245825..3247047-

>CAN33_55060-T1 ID=CAN33_55060-T1|Name=CAN33_55060-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2316bp|location=Sequence derived from alignment at NKJJ01000020.1:3245825..3247047- (Aspergillus niger FDAARGOS_311)
GTGCTGCTGCTGTCGCAGCCTCTGTCGTATCCGCTGCCGTTGCTGTCTTT
GACGACTCATTTGGCTCTTTTGTCGACTAAGCTGCCTAAGCTCAAGTCCA
AGGGAGAAGAAGATCCCTTCTTCGATGATGATTGGAATGCCGCTGAATAT
CTATACCCCCGCTCGCAGTCTGGGCCTCGCCTATCTTCTACGAAGCAGGT
CCGGCCTCCTGTGACGCTGCTTGTTATTTCCGTGGGCGATAATGTCATCT
TTGATCCTAACAGGGAGGAAATCACTGTCGCGGATACTGTTCTGGCTGTT
TCTATCACCCAGGATAGTGACTCGGATGGTCTGAAGCTACTTTCTATTCG
CACAGTCGACCCTCCGTCCCGTCTTACGCAGCCGGGTGTGTCGAACTCGG
AGAATGTGGCGACACTGGGTTCCACAGCAGCTGCGGAAGAGGCGGCCATG
ACGGATCCGTCTACTGGCGAAGAGGTCGCGGGCGTTTGGAGACCCCGACG
GGGCGGTGTCAAACGGCGCACGATTGCAAAGATGCTCAAGCTGGTCTTGC
AGAAGGGAGGTGTTGGTGAAGAGGTCCTTGAGGGTCTTGAGGGAGTCCAG
GTGGGCTGAATGGCCGCCCAACGCCAGGCCTCCTCCGCCTCCCAAACGCC
CCTCATCTCCCCAGCAGAGCTTTCCTACCTCTACACATCACTATCTCTCC
CAGACGGCCCTATCCGCCCCGATGGCCGCTCGCCCACGCAATTCCGCCCA
TTGACCGCAGAAACAGACATTCTGCCGGGCACCAACGGTAGCGCGCGCGT
TGGGTTCGCCGACGGTACGCAAGCCATCGTGGGTGTGAAGGCTGAGGTGG
AAAAGACCGTTGTTGCGGCCGAAGCACTGAATCTATCGCAAAAAACGCAG
GAAGATTACGCCGATAATGAAGGCGGAGAGGGCCAGAAAACATCCAGTCA
TGGCCATGGCTCGTGGGTGCAGATGTCTATTGAGATCCCGGGTTTTCGGG
ATGATGATGCCCTCCCGGTTTTCTTGTCGGAGATGATGCGCGAGCCGCTT
GTTGAGTCGGTCGCTGGAGGCGATGGAAAGGGTGAGGATGAGATGGCTGG
GGGGTTGAAGGGGAGGTTGGTTATTAATAAGAGGTGGCATTGGAGGTTGT
ATATTGATGTGCTGCTGCTGTCGCAGCCTCTGTCGTATCCGCTGCCGTTG
CTGTCTTTGACGACTCATTTGGCTCTTTTGTCGACTAAGCTGCCTAAGCT
CAAGTCCAAGGGAGAAGAAGATCCCTTCTTCGATGATGATTGGAATGCCG
CTGAATATCTATACCCCCGCTCGCAGTCTGGGCCTCGCCTATCTTCTACG
AAGCAGGTCCGGCCTCCTGTGACGCTGCTTGTTATTTCCGTGGGCGATAA
TGTCATCTTTGATCCTAACAGGGAGGAAATCACTGTCGCGGATACTGTTC
TGGCTGTTTCTATCACCCAGGATAGTGACTCGGATGGTCTGAAGCTACTT
TCTATTCGCACAGTCGACCCTCCGTCCCGTCTTACGCAGCCGGGTGTGTC
GAACTCGGAGAATGTGGCGACACTGGGTTCCACAGCAGCTGCGGAAGAGG
CGGCCATGACGGATCCGTCTACTGGCGAAGAGGTCGCGGGCGTTTGGAGA
CCCCGACGGGGCGGTGTCAAACGGCGCACGATTGCAAAGATGCTCAAGCT
GGTCTTGCAGAAGGGAGGTGTTGGTGAAGAGGTCCTTGAGGGTCTTGAGG
GAGTCCAGGTGGGCTGAATGGCCGCCCAACGCCAGGCCTCCTCCGCCTCC
CAAACGCCCCTCATCTCCCCAGCAGAGCTTTCCTACCTCTACACATCACT
ATCTCTCCCAGACGGCCCTATCCGCCCCGATGGCCGCTCGCCCACGCAAT
TCCGCCCATTGACCGCAGAAACAGACATTCTGCCGGGCACCAACGGTAGC
GCGCGCGTTGGGTTCGCCGACGGTACGCAAGCCATCGTGGGTGTGAAGGC
TGAGGTGGAAAAGACCGTTGTTGCGGCCGAAGCACTGAATCTATCGCAAA
AAACGCAGGAAGATTACGCCGATAATGAAGGCGGAGAGGGCCAGAAAACA
TCCAGTCATGGCCATGGCTCGTGGGTGCAGATGTCTATTGAGATCCCGGG
TTTTCGGGATGATGATGCCCTCCCGGTTTTCTTGTCGGAGATGATGCGCG
AGCCGCTTGTTGAGTCGGTCGCTGGAGGCGATGGAAAGGGTGAGGATGAG
ATGGCTGGGGGGTTGAAGGGGAGGTTGGTTATTAATAAGAGGTGGCATTG
GAGGTTGTATATTGAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55060CAN33_55060Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55060-T1CAN33_55060-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55060-T1.cdsCAN33_55060-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55060-T1.exon2CAN33_55060-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55060-T1.exon1CAN33_55060-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR001247
DBxrefPFAM:PF01138
Product3' exoribonuclease family domain 1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3245825..3247047 -
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