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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3265148..3265789- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_55085-T1 ID=CAN33_55085-T1|Name=CAN33_55085-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=642bp|location=Sequence derived from alignment at NKJJ01000020.1:3265148..3265789- (Aspergillus niger FDAARGOS_311)
ATGCCCTGGTCCGCCGCTCTCCCTCAGGCGATGTTCGCCCACCCCCTAGT
ATCCGTCGTGACGCCCATCGCGACGGGTTCTCTAGTCGGGTACCATACCA
ACCGTGAGCTTCCCCTACCTATGTCTACCACTCAATTCCACCTCTTTGAG
TTCAAATATTAACTAAAACCAGGCAAAGGTCGCACCAAACAAGTCTACCA
TTCTCTCAAAAAACCCCCTCTCTACCCCCCAACCTGGGCCTTCCCGGTCG
TCTGGACCGTCCTCTACGGCATGATGGGCTTCGCAATCCACCACGCAACA
GTATCAGGAACCATAGCTACCGCATACCCACCTTCCTCATCATCATCTAT
TGTCCAAGACTGGGCCGTCAAGTCTCAGACCCTATATATTTCCCAGCTGG
CGTTGAATCACCTCTGGATGCCGCTGTTCTTCATGTTCCGGAAGCCGGCG
TGGGCGTTGGCGGATCTGCTGCTTCTGAGCGGGAATGTGGCGACGTTGAT
GCATATCTGGTGGAAGCATGACCGGGTGGCGTTCTGGTTGATGACGCCGT
ATGCGGCTTGGTTGGGGGTTGCGACGTATTTGAATGCTGGGGTGGGGTAC
TTGAATAATTGGGTGATTGGGGATGGGAGGAAGGAGGAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3265148..3265789- >CAN33_55085-T1 ID=CAN33_55085-T1|Name=CAN33_55085-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1146bp|location=Sequence derived from alignment at NKJJ01000020.1:3265148..3265789- (Aspergillus niger FDAARGOS_311)
GCAAAGGTCGCACCAAACAAGTCTACCATTCTCTCAAAAAACCCCCTCTC
TACCCCCCAACCTGGGCCTTCCCGGTCGTCTGGACCGTCCTCTACGGCAT
GATGGGCTTCGCAATCCACCACGCAACAGTATCAGGAACCATAGCTACCG
CATACCCACCTTCCTCATCATCATCTATTGTCCAAGACTGGGCCGTCAAG
TCTCAGACCCTATATATTTCCCAGCTGGCGTTGAATCACCTCTGGATGCC
GCTGTTCTTCATGTTCCGGAAGCCGGCGTGGGCGTTGGCGGATCTGCTGC
TTCTGAGCGGGAATGTGGCGACGTTGATGCATATCTGGTGGAAGCATGAC
CGGGTGGCGTTCTGGTTGATGACGCCGTATGCGGCTTGGTTGGGGGTTGC
GACGTATTTGAATGCTGGGGTGGGGTACTTGAATAATTGGGTGATTGGGG
ATGGGAGGAAGGAGGAGTGAATGCCCTGGTCCGCCGCTCTCCCTCAGGCG
ATGTTCGCCCACCCCCTAGTATCCGTCGTGACGCCCATCGCGACGGGTTC
TCTAGTCGGGTACCATACCAACCGCAAAGGTCGCACCAAACAAGTCTACC
ATTCTCTCAAAAAACCCCCTCTCTACCCCCCAACCTGGGCCTTCCCGGTC
GTCTGGACCGTCCTCTACGGCATGATGGGCTTCGCAATCCACCACGCAAC
AGTATCAGGAACCATAGCTACCGCATACCCACCTTCCTCATCATCATCTA
TTGTCCAAGACTGGGCCGTCAAGTCTCAGACCCTATATATTTCCCAGCTG
GCGTTGAATCACCTCTGGATGCCGCTGTTCTTCATGTTCCGGAAGCCGGC
GTGGGCGTTGGCGGATCTGCTGCTTCTGAGCGGGAATGTGGCGACGTTGA
TGCATATCTGGTGGAAGCATGACCGGGTGGCGTTCTGGTTGATGACGCCG
TATGCGGCTTGGTTGGGGGTTGCGACGTATTTGAATGCTGGGGTGGGGTA
CTTGAATAATTGGGTGATTGGGGATGGGAGGAAGGAGGAGTGAATGCCCT
GGTCCGCCGCTCTCCCTCAGGCGATGTTCGCCCACCCCCTAGTATCCGTC
GTGACGCCCATCGCGACGGGTTCTCTAGTCGGGTACCATACCAACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004307 |
| DBxref | InterPro:IPR038330 |
| DBxref | PFAM:PF03073 |
| Product | TspO/MBR family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3265148..3265789 - |
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