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CAN33_55155-T1, CAN33_55155-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55155-T1
Unique NameCAN33_55155-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3299419..3299938-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55155-T1 ID=CAN33_55155-T1|Name=CAN33_55155-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=520bp|location=Sequence derived from alignment at NKJJ01000020.1:3299419..3299938- (Aspergillus niger FDAARGOS_311)
ATGAGCGAGAAAGCACGCTTAAAATGTACCGTCTACGTGGGGGGTCTTGA
CCAGGCCGTGACGATGCAGACGCTGGCCGAAGCATTCGTTCCCTTTGGTG
AAGTGGTCGATATTACGCTCCCCAAACCCGACCTTCCGAACTCCAACGAG
CTCCACCGCGGTTTTGGATATGTGGAGTTTGATCTGCCCGAGGATGCAAA
AGAGGCGATCGACAATATGGATGGAAGCGAACTATATGGCCGGACAATCA
AGGTTGCTGCTGCTAAGCCGCAGAAGGACAGCAACGAAGGACTCGGCAGC
AAGACAGCTATCTGGGAACAGGTACGCCATGACGTTCATCTTGTCATTAT
AGATCATTTGCTAATTACGTATGAAACAATAGGAGGGGTACTTGGCCAAG
TATGCCGTCGACGAGGAAGACAAATTGGCTGCCGAGGGAGGCGAGACCGA
TGGAGCCGAACGTCAAGATCCCATGCAAGGACTCGAGGAACTGGACGTGG
CGGGACCCAAGCCGGAATGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:3299419..3299938-

>CAN33_55155-T1 ID=CAN33_55155-T1|Name=CAN33_55155-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=918bp|location=Sequence derived from alignment at NKJJ01000020.1:3299419..3299938- (Aspergillus niger FDAARGOS_311)
GAGGGGTACTTGGCCAAGTATGCCGTCGACGAGGAAGACAAATTGGCTGC
CGAGGGAGGCGAGACCGATGGAGCCGAACGTCAAGATCCCATGCAAGGAC
TCGAGGAACTGGACGTGGCGGGACCCAAGCCGGAATGAATGAGCGAGAAA
GCACGCTTAAAATGTACCGTCTACGTGGGGGGTCTTGACCAGGCCGTGAC
GATGCAGACGCTGGCCGAAGCATTCGTTCCCTTTGGTGAAGTGGTCGATA
TTACGCTCCCCAAACCCGACCTTCCGAACTCCAACGAGCTCCACCGCGGT
TTTGGATATGTGGAGTTTGATCTGCCCGAGGATGCAAAAGAGGCGATCGA
CAATATGGATGGAAGCGAACTATATGGCCGGACAATCAAGGTTGCTGCTG
CTAAGCCGCAGAAGGACAGCAACGAAGGACTCGGCAGCAAGACAGCTATC
TGGGAACAGGAGGGGTACTTGGCCAAGTATGCCGTCGACGAGGAAGACAA
ATTGGCTGCCGAGGGAGGCGAGACCGATGGAGCCGAACGTCAAGATCCCA
TGCAAGGACTCGAGGAACTGGACGTGGCGGGACCCAAGCCGGAATGAATG
AGCGAGAAAGCACGCTTAAAATGTACCGTCTACGTGGGGGGTCTTGACCA
GGCCGTGACGATGCAGACGCTGGCCGAAGCATTCGTTCCCTTTGGTGAAG
TGGTCGATATTACGCTCCCCAAACCCGACCTTCCGAACTCCAACGAGCTC
CACCGCGGTTTTGGATATGTGGAGTTTGATCTGCCCGAGGATGCAAAAGA
GGCGATCGACAATATGGATGGAAGCGAACTATATGGCCGGACAATCAAGG
TTGCTGCTGCTAAGCCGCAGAAGGACAGCAACGAAGGACTCGGCAGCAAG
ACAGCTATCTGGGAACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55155CAN33_55155Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55155-T1CAN33_55155-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55155-T1.cdsCAN33_55155-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55155-T1.exon2CAN33_55155-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55155-T1.exon1CAN33_55155-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034168
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA recognition motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3299419..3299938 -
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