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CAN33_55170-T1, CAN33_55170-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55170-T1
Unique NameCAN33_55170-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3308218..3309520+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55170-T1 ID=CAN33_55170-T1|Name=CAN33_55170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1303bp|location=Sequence derived from alignment at NKJJ01000020.1:3308218..3309520+ (Aspergillus niger FDAARGOS_311)
ATGCTTTTGCGTCGCTCACTACGTTCCCGCTTGGGGCGGGATGACCAGCC
GAGCATGGATGCTAACATGAACACCAGATCTACGAGAGCTGCCGCCCGGG
CTGCTGTCTCCACCCCAGCGGTGACCATTTCACGCGTTGCATCTGAGTTG
CACGGGAATTCCACTCATAGGTCTATCCATTTGACAGTAAAGATGCCGTC
CAGCAAACTTCGTGAAGTTACCAGTGGTAGCACCCGAAGTGGTGCATCAA
CCAGACGTTCGGTTAATGTCTTTACGGAGAATCCCATTGTGACGGGTCCC
CGTACCAGCAGACCCAAAAAGAAGCTTGTGGAAGTGGACACAAGCGATGA
AGATGACCTGGAAGACCAGGAAGAAGATGAGGTGGACGACGATGAAGATG
CGCCAGGTGAAGACGACGATGACGTAGATGCCGATGGCGATTTAGACATG
GATGATGCGCCGCCCCAGCCACCAGTGTCAAAACGGCAGGCGAAAGCAGC
GGCAGCGGCAGCGCCGAGCGGGAAGGCCGTTAAAAGTGTAGAGGCAAAAG
AGATGGAACTGGATGATGACGACGAGGACGACGACGATGAGGAGCTCTCG
GAGCTGGAGTCAGACGCTGAAGGCGAGCCAGACGATCAAGACGAAAGTAT
GATGGCCAATGGTGGCGCAGAGGATTTAGAAGGAGAAGAGGAGGAAGAGG
ATGACGACCTGGACAGCGATGACGATACCCCGACCGCCGATCTGAGCAAG
ATGACCAAACGGCAAAGGGGTAATCTGGGTAACGACTTCCTGCAACTTCC
TATGGGTGAGTCTTCATGTTCCGCATGGTCATTGAGAGCATCATTAGTCT
GACTGAGAGCAGAACCCCAGGTGAAAAAGCACCTGACGGCCGAGGAGCGC
GCTATGCGTCGTGCCGAAATGGCTCGTCGTAGAAAGAACCTCAGCGAGAA
GCGGAATGAGGAGGAGAAGGTACGTACCATCTAGGGTTCTGCAAACTGCA
GCGGGGTGGGCTTTTCTGTACTTCGAGTCGATGCTGACATGAGACTCACA
GATGGACACCATCAACAGGCTTCTACGGAAGCAGGCACCCAAGCGACGAG
GACGCATTCCAGCTGCAGAGACAGCCGAAGCAGCTTCTGCAGAGCAGGAG
GTCGCGGAACCCGAGAAACCGGACCCGACGATGGTGAGGTGGGTAAGTGG
CCGCGAAGGCAGCCGAGTAGGTGTGCCAGAGGAATGGCTCGGTATACCTG
CAGGGCGTGTCTTTGATGGCAATGGCTCGGGCAAGCTCGTGCAAGAGGTA
TAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:3308218..3309520+

>CAN33_55170-T1 ID=CAN33_55170-T1|Name=CAN33_55170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4392bp|location=Sequence derived from alignment at NKJJ01000020.1:3308218..3309520+ (Aspergillus niger FDAARGOS_311)
ATGCTTTTGCGTCGCTCACTACGTTCCCGCTTGGGGCGGGATGACCAGCC
GAGCATGGATGCTAACATGAACACCAGATCTACGAGAGCTGCCGCCCGGG
CTGCTGTCTCCACCCCAGCGGTGACCATTTCACGCGTTGCATCTGAGTTG
CACGGGAATTCCACTCATAGGTCTATCCATTTGACAGTAAAGATGCCGTC
CAGCAAACTTCGTGAAGTTACCAGTGGTAGCACCCGAAGTGGTGCATCAA
CCAGACGTTCGGTTAATGTCTTTACGGAGAATCCCATTGTGACGGGTCCC
CGTACCAGCAGACCCAAAAAGAAGCTTGTGGAAGTGGACACAAGCGATGA
AGATGACCTGGAAGACCAGGAAGAAGATGAGGTGGACGACGATGAAGATG
CGCCAGGTGAAGACGACGATGACGTAGATGCCGATGGCGATTTAGACATG
GATGATGCGCCGCCCCAGCCACCAGTGTCAAAACGGCAGGCGAAAGCAGC
GGCAGCGGCAGCGCCGAGCGGGAAGGCCGTTAAAAGTCTGGAGTCAGACG
CTGAAGGCGAGCCAGACGATCAAGACGAAAGTATGATGGCCAATGGTGGC
GCAGAGGATTTAGAAGGAGAAGAGGAGGAAGAGGATGACGACCTGGACAG
CGATGACGATACCCCGACCGCCGATCTGAGCAAGATGACCAAACGGCAAA
GGGGTAATCTGGGTAACGACTTCCTGCAACTTCCTATGGAACCCCAGGTG
AAAAAGCACCTGACGGCCGAGGAGCGCGCTATGCGTCGTGCCGAAATGGC
TCGTCGTAGAAAGAACCTCAGCGAGAAGCGGAATGAGGAGGAGAAGATGG
ACACCATCAACAGGCTTCTACGGAAGCAGGCACCCAAGCGACGAGGACGC
ATTCCAGCTGCAGAGACAGCCGAAGCAGCTTCTGCAGAGCAGGAGGTCGC
GGAACCCGAGAAACCGGACCCGACGATGGTGAGGTGGGTAAGTGGCCGCG
AAGGCAGCCGAGTAGGTGTGCCAGAGGAATGGCTCGGTATACCTGCAGGG
CGTGTCTTTGATGGCAATGGCTCGGGCAAGCTCGTGCAAGAGGTATAAAT
GCTTTTGCGTCGCTCACTACGTTCCCGCTTGGGGCGGGATGACCAGCCGA
GCATGGATGCTAACATGAACACCAGATCTACGAGAGCTGCCGCCCGGGCT
GCTGTCTCCACCCCAGCGGTGACCATTTCACGCGTTGCATCTGAGTTGCA
CGGGAATTCCACTCATAGGTCTATCCATTTGACAGTAAAGATGCCGTCCA
GCAAACTTCGTGAAGTTACCAGTGGTAGCACCCGAAGTGGTGCATCAACC
AGACGTTCGGTTAATGTCTTTACGGAGAATCCCATTGTGACGGGTCCCCG
TACCAGCAGACCCAAAAAGAAGCTTGTGGAAGTGGACACAAGCGATGAAG
ATGACCTGGAAGACCAGGAAGAAGATGAGGTGGACGACGATGAAGATGCG
CCAGGTGAAGACGACGATGACGTAGATGCCGATGGCGATTTAGACATGGA
TGATGCGCCGCCCCAGCCACCAGTGTCAAAACGGCAGGCGAAAGCAGCGG
CAGCGGCAGCGCCGAGCGGGAAGGCCGTTAAAAGTCTGGAGTCAGACGCT
GAAGGCGAGCCAGACGATCAAGACGAAAGTATGATGGCCAATGGTGGCGC
AGAGGATTTAGAAGGAGAAGAGGAGGAAGAGGATGACGACCTGGACAGCG
ATGACGATACCCCGACCGCCGATCTGAGCAAGATGACCAAACGGCAAAGG
GGTAATCTGGGTAACGACTTCCTGCAACTTCCTATGGAACCCCAGGTGAA
AAAGCACCTGACGGCCGAGGAGCGCGCTATGCGTCGTGCCGAAATGGCTC
GTCGTAGAAAGAACCTCAGCGAGAAGCGGAATGAGGAGGAGAAGATGGAC
ACCATCAACAGGCTTCTACGGAAGCAGGCACCCAAGCGACGAGGACGCAT
TCCAGCTGCAGAGACAGCCGAAGCAGCTTCTGCAGAGCAGGAGGTCGCGG
AACCCGAGAAACCGGACCCGACGATGGTGAGGTGGGTAAGTGGCCGCGAA
GGCAGCCGAGTAGGTGTGCCAGAGGAATGGCTCGGTATACCTGCAGGGCG
TGTCTTTGATGGCAATGGCTCGGGCAAGCTCGTGCAAGAGGTATAAATGC
TTTTGCGTCGCTCACTACGTTCCCGCTTGGGGCGGGATGACCAGCCGAGC
ATGGATGCTAACATGAACACCAGATCTACGAGAGCTGCCGCCCGGGCTGC
TGTCTCCACCCCAGCGGTGACCATTTCACGCGTTGCATCTGAGTTGCACG
GGAATTCCACTCATAGGTCTATCCATTTGACAGTAAAGATGCCGTCCAGC
AAACTTCGTGAAGTTACCAGTGGTAGCACCCGAAGTGGTGCATCAACCAG
ACGTTCGGTTAATGTCTTTACGGAGAATCCCATTGTGACGGGTCCCCGTA
CCAGCAGACCCAAAAAGAAGCTTGTGGAAGTGGACACAAGCGATGAAGAT
GACCTGGAAGACCAGGAAGAAGATGAGGTGGACGACGATGAAGATGCGCC
AGGTGAAGACGACGATGACGTAGATGCCGATGGCGATTTAGACATGGATG
ATGCGCCGCCCCAGCCACCAGTGTCAAAACGGCAGGCGAAAGCAGCGGCA
GCGGCAGCGCCGAGCGGGAAGGCCGTTAAAAGTCTGGAGTCAGACGCTGA
AGGCGAGCCAGACGATCAAGACGAAAGTATGATGGCCAATGGTGGCGCAG
AGGATTTAGAAGGAGAAGAGGAGGAAGAGGATGACGACCTGGACAGCGAT
GACGATACCCCGACCGCCGATCTGAGCAAGATGACCAAACGGCAAAGGGG
TAATCTGGGTAACGACTTCCTGCAACTTCCTATGGAACCCCAGGTGAAAA
AGCACCTGACGGCCGAGGAGCGCGCTATGCGTCGTGCCGAAATGGCTCGT
CGTAGAAAGAACCTCAGCGAGAAGCGGAATGAGGAGGAGAAGATGGACAC
CATCAACAGGCTTCTACGGAAGCAGGCACCCAAGCGACGAGGACGCATTC
CAGCTGCAGAGACAGCCGAAGCAGCTTCTGCAGAGCAGGAGGTCGCGGAA
CCCGAGAAACCGGACCCGACGATGGTGAGGTGGGTAAGTGGCCGCGAAGG
CAGCCGAGTAGGTGTGCCAGAGGAATGGCTCGGTATACCTGCAGGGCGTG
TCTTTGATGGCAATGGCTCGGGCAAGCTCGTGCAAGAGGTATAAATGCTT
TTGCGTCGCTCACTACGTTCCCGCTTGGGGCGGGATGACCAGCCGAGCAT
GGATGCTAACATGAACACCAGATCTACGAGAGCTGCCGCCCGGGCTGCTG
TCTCCACCCCAGCGGTGACCATTTCACGCGTTGCATCTGAGTTGCACGGG
AATTCCACTCATAGGTCTATCCATTTGACAGTAAAGATGCCGTCCAGCAA
ACTTCGTGAAGTTACCAGTGGTAGCACCCGAAGTGGTGCATCAACCAGAC
GTTCGGTTAATGTCTTTACGGAGAATCCCATTGTGACGGGTCCCCGTACC
AGCAGACCCAAAAAGAAGCTTGTGGAAGTGGACACAAGCGATGAAGATGA
CCTGGAAGACCAGGAAGAAGATGAGGTGGACGACGATGAAGATGCGCCAG
GTGAAGACGACGATGACGTAGATGCCGATGGCGATTTAGACATGGATGAT
GCGCCGCCCCAGCCACCAGTGTCAAAACGGCAGGCGAAAGCAGCGGCAGC
GGCAGCGCCGAGCGGGAAGGCCGTTAAAAGTCTGGAGTCAGACGCTGAAG
GCGAGCCAGACGATCAAGACGAAAGTATGATGGCCAATGGTGGCGCAGAG
GATTTAGAAGGAGAAGAGGAGGAAGAGGATGACGACCTGGACAGCGATGA
CGATACCCCGACCGCCGATCTGAGCAAGATGACCAAACGGCAAAGGGGTA
ATCTGGGTAACGACTTCCTGCAACTTCCTATGGAACCCCAGGTGAAAAAG
CACCTGACGGCCGAGGAGCGCGCTATGCGTCGTGCCGAAATGGCTCGTCG
TAGAAAGAACCTCAGCGAGAAGCGGAATGAGGAGGAGAAGATGGACACCA
TCAACAGGCTTCTACGGAAGCAGGCACCCAAGCGACGAGGACGCATTCCA
GCTGCAGAGACAGCCGAAGCAGCTTCTGCAGAGCAGGAGGTCGCGGAACC
CGAGAAACCGGACCCGACGATGGTGAGGTGGGTAAGTGGCCGCGAAGGCA
GCCGAGTAGGTGTGCCAGAGGAATGGCTCGGTATACCTGCAGGGCGTGTC
TTTGATGGCAATGGCTCGGGCAAGCTCGTGCAAGAGGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031011Ino80 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55170CAN33_55170Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55170-T1.exon1CAN33_55170-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_55170-T1.exon2CAN33_55170-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55170-T1.exon3CAN33_55170-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_55170-T1.exon4CAN33_55170-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55170-T1.cdsCAN33_55170-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55170-T1CAN33_55170-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR006880
DBxrefPFAM:PF04795
ProductPAPA-1-like conserved region family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3308218..3309520 +
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