You are here

Home

CAN33_55200-T1, CAN33_55200-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55200-T1
Unique NameCAN33_55200-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3329538..3330500+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55200-T1 ID=CAN33_55200-T1|Name=CAN33_55200-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=963bp|location=Sequence derived from alignment at NKJJ01000020.1:3329538..3330500+ (Aspergillus niger FDAARGOS_311)
ATGTCTCACTCTCACTCCCACGACAACGATGTCAGCCATTCCCACGATGA
CTTCGGTGGTCACGGCCACTCCCATGAGATCCTCGACGGTCCCGGTTCAT
ACATAAACCGTGAGATGCCTCTCTCGGAGGAGCGTGACTGGAAGGACCGT
GCCTTTACCATTGGCATTGGAGGGTAAGTCACAGCAATCATACTATTACT
TATTATCCTCGCCTTCCATCTAACTCACCCATGTAGACCCGTCGGATCGG
GCAAAACTGCCCTCATGCTGGCCCTCTGCCAGGCCCTCCGCGACGAGTAC
AACATCGCCGCCGTCACCAACGACATCTTCACCAGGTATACAACCCCTCC
CCCCTCCACCGCTTTTCCCCCATACCAAAAGTAATCAGCTAACCCAATAC
TTTTTTCATCAAAAAACAGAGAAGACGCCGAATTCCTCACCCGCCACAAA
GCCCTTTCCCCGTCCCGCATCCGCGCCATCGAAACCGGAGGTTGCCCTCA
CGCCGCCGTCCGCGAAGACATCAGCGCCAACCTCCTAGCCCTGCAAACCC
TGCACAGACAATTCCAAACCGACCTCCTTCTCATCGAATCCGGCGGCGAC
AACCTCGCTGCCAACTACAGTCGCGAGCTGGCTGATTTCATCATCTACGT
GATTGATGTCGCTGGTGGTGATAAGGTGCCCCGTAAGGGTGGACCCGGTA
TCACGGGCTCGGATCTGCTGGTCGTGAACAAGATCGACCTTGCTGAGGCA
GTGGGTGCTGATTTGGCGGTCATGGAGAGGGATGCGGCGAAGATGCGCGA
GGGTGGACCGACGGTCTTTGCGGTCGTGAAGAGTGGTACGAGAGTGCAGG
ATATTGTCAATCTTATTTTGAGTGCTTGGAAGGCGAGCGGTGCTTATGAG
CATAGCCTGGCGAGGTGGAAGGCTGGTGCGAAGAGGGGGTCCGGGAGTGT
GGATGATGCGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:3329538..3330500+

>CAN33_55200-T1 ID=CAN33_55200-T1|Name=CAN33_55200-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2448bp|location=Sequence derived from alignment at NKJJ01000020.1:3329538..3330500+ (Aspergillus niger FDAARGOS_311)
ATGTCTCACTCTCACTCCCACGACAACGATGTCAGCCATTCCCACGATGA
CTTCGGTGGTCACGGCCACTCCCATGAGATCCTCGACGGTCCCGGTTCAT
ACATAAACCGTGAGATGCCTCTCTCGGAGGAGCGTGACTGGAAGGACCGT
GCCTTTACCATTGGCATTGGAGGACCCGTCGGATCGGGCAAAACTGCCCT
CATGCTGGCCCTCTGCCAGGCCCTCCGCGACGAGTACAACATCGCCGCCG
TCACCAACGACATCTTCACCAGAGAAGACGCCGAATTCCTCACCCGCCAC
AAAGCCCTTTCCCCGTCCCGCATCCGCGCCATCGAAACCGGAGGTTGCCC
TCACGCCGCCGTCCGCGAAGACATCAGCGCCAACCTCCTAGCCCTGCAAA
CCCTGCACAGACAATTCCAAACCGACCTCCTTCTCATCGAATCCGGCGGC
GACAACCTCGCTGCCAACTACAGTCGCGAGCTGGCTGATTTCATCATCTA
CGTGATTGATGTCGCTGGTGGTGATAAGGTGCCCCGTAAGGGTGGACCCG
GTATCACGGGCTCGGATCTGCTGGTCGTGAACAAGATCGACCTTGCTGAG
GCAGTGGGTGCTGATTTGGCGGTCATGGAGAGGGATGCGGCGAAGATGCG
CGAGGGTGGACCGACGGTCTTTGCGGTCGTGAAGAGTGGTACGAGAGTGC
AGGATATTGTCAATCTTATTTTGAGTGCTTGGAAGGCGAGCGGTGCTTAT
GAGCATAGCCTGGCGAGGTGGAAGGCTGGTGCGAAGAGGGGGTCCGGGAG
TGTGGATGATGCGTGAATGTCTCACTCTCACTCCCACGACAACGATGTCA
GCCATTCCCACGATGACTTCGGTGGTCACGGCCACTCCCATGAGATCCTC
GACGGTCCCGGTTCATACATAAACCGTGAGATGCCTCTCTCGGAGGAGCG
TGACTGGAAGGACCGTGCCTTTACCATTGGCATTGGAGGACCCGTCGGAT
CGGGCAAAACTGCCCTCATGCTGGCCCTCTGCCAGGCCCTCCGCGACGAG
TACAACATCGCCGCCGTCACCAACGACATCTTCACCAGAGAAGACGCCGA
ATTCCTCACCCGCCACAAAGCCCTTTCCCCGTCCCGCATCCGCGCCATCG
AAACCGGAGGTTGCCCTCACGCCGCCGTCCGCGAAGACATCAGCGCCAAC
CTCCTAGCCCTGCAAACCCTGCACAGACAATTCCAAACCGACCTCCTTCT
CATCGAATCCGGCGGCGACAACCTCGCTGCCAACTACAGTCGCGAGCTGG
CTGATTTCATCATCTACGTGATTGATGTCGCTGGTGGTGATAAGGTGCCC
CGTAAGGGTGGACCCGGTATCACGGGCTCGGATCTGCTGGTCGTGAACAA
GATCGACCTTGCTGAGGCAGTGGGTGCTGATTTGGCGGTCATGGAGAGGG
ATGCGGCGAAGATGCGCGAGGGTGGACCGACGGTCTTTGCGGTCGTGAAG
AGTGGTACGAGAGTGCAGGATATTGTCAATCTTATTTTGAGTGCTTGGAA
GGCGAGCGGTGCTTATGAGCATAGCCTGGCGAGGTGGAAGGCTGGTGCGA
AGAGGGGGTCCGGGAGTGTGGATGATGCGTGAATGTCTCACTCTCACTCC
CACGACAACGATGTCAGCCATTCCCACGATGACTTCGGTGGTCACGGCCA
CTCCCATGAGATCCTCGACGGTCCCGGTTCATACATAAACCGTGAGATGC
CTCTCTCGGAGGAGCGTGACTGGAAGGACCGTGCCTTTACCATTGGCATT
GGAGGACCCGTCGGATCGGGCAAAACTGCCCTCATGCTGGCCCTCTGCCA
GGCCCTCCGCGACGAGTACAACATCGCCGCCGTCACCAACGACATCTTCA
CCAGAGAAGACGCCGAATTCCTCACCCGCCACAAAGCCCTTTCCCCGTCC
CGCATCCGCGCCATCGAAACCGGAGGTTGCCCTCACGCCGCCGTCCGCGA
AGACATCAGCGCCAACCTCCTAGCCCTGCAAACCCTGCACAGACAATTCC
AAACCGACCTCCTTCTCATCGAATCCGGCGGCGACAACCTCGCTGCCAAC
TACAGTCGCGAGCTGGCTGATTTCATCATCTACGTGATTGATGTCGCTGG
TGGTGATAAGGTGCCCCGTAAGGGTGGACCCGGTATCACGGGCTCGGATC
TGCTGGTCGTGAACAAGATCGACCTTGCTGAGGCAGTGGGTGCTGATTTG
GCGGTCATGGAGAGGGATGCGGCGAAGATGCGCGAGGGTGGACCGACGGT
CTTTGCGGTCGTGAAGAGTGGTACGAGAGTGCAGGATATTGTCAATCTTA
TTTTGAGTGCTTGGAAGGCGAGCGGTGCTTATGAGCATAGCCTGGCGAGG
TGGAAGGCTGGTGCGAAGAGGGGGTCCGGGAGTGTGGATGATGCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0016151nickel cation binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55200CAN33_55200Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55200-T1.exon1CAN33_55200-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_55200-T1.exon2CAN33_55200-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55200-T1.exon3CAN33_55200-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55200-T1.cdsCAN33_55200-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55200-T1CAN33_55200-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003495
DBxrefInterPro:IPR004400
DBxrefInterPro:IPR012202
DBxrefPFAM:PF02492
Producturease accessory protein UreG
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3329538..3330500 +
Powered by Drupal