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CAN33_55205-T1, CAN33_55205-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55205-T1
Unique NameCAN33_55205-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3330890..3332554-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55205-T1 ID=CAN33_55205-T1|Name=CAN33_55205-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1665bp|location=Sequence derived from alignment at NKJJ01000020.1:3330890..3332554- (Aspergillus niger FDAARGOS_311)
ATGGCGGGACCAGCAACGACGGCCGTTGCGCCGGCCGACAACAAGCGCAA
GGAAAGCAAAAGAATGATGGAAGCGCAAAAGACCTACGGCCGGGGTAAAT
CCATCCACACCCACAGCGTTCGCGACAAGAAACTGCGCAGCAACCTCAAA
GCCGTGGAAGACAAGTACAAGGAAGCAGCCCTGAAGGCCAAGGATGCGGA
AATCCTGCTCGAGCACGATGCCGGATTCCTCGAGCCGGAGGCAGAGCTGG
AACGGACGTACAAAGTTCGACAGGATGAGATTCGCGAGAGCGTCGGTATC
GAAACGGCCAAGAAGGGATTTGAGCTCAAGTTGACGGACATGGGACCCTA
CCGCATGGACTACACAAGGAACGGTCGCGAATTGCTGTTGGCCGGGCGCA
AAGGGCATGTGGCAACGATGGACTGGCGGAATGGAAAGCTGGGATGCGAG
TTGCAGTTGAACGAGACTGTGCGCGATGCTCGGTGGCTGCACAATAATCA
GTTCTTTGCCGTGGCGCAGAAGAGATCCGTCTATATCTACGACCACGCCG
GTGTGGAACTGCACTGTCTCAACAAGCATCTCGAGCCTCTTTTCCTTGAA
TTCCTGCCCTACCACTTCCTCCTTGCGAGCGCTGTGAGTGCACCTGCCCC
CCAATTTACAACTACAGAGTCCTAACTAATCATTCACTAGCAAATGAGCG
GCTACCTCAAATACACCGACACCTCGACGGGCCAAATGGTCGCCGAACTG
CCTACCCGCCTCGGTGCACCCACCTCCCTCGCCCAGAACCCATGGAACGC
CATCCTACACGTCGGCCACCAAAACGGTACCGTGACTCTCTGGTCTCCCA
ACTCTCAAACCGCGCTCGTGAAGGCCCTTGTCCACCGCGGCCCCGTCCGC
TCGATGGCCATCGATCGCCAAGGCCGATACATGGTATCGACCGGCCAAGA
CCAAAAGATGAACGTCTGGGACATCCGCATGTTCCGCGAAGTACACAGCT
ACTCATGCTACCAACCCGGCGCATCCGTGTCCATCAGCGACCGGAACCTA
ACAGCCGTAGGCTGGGGCACGCAAGTCAGCGTATGGCGGGGTCTCTTCGA
CGCCGCCGCCGCAGACCAAGGCAAGGTACAGAGTCCCTACATGGCCTGGG
GCGGTGACGGCCAACGCATCGAAAACATGCGCTGGTGCCCCTTCGAAGAT
GTTCTCGGCGTGGGCCACGACCAAGGCTTCGCCAGCATCATCGTCCCCGG
CGCGGGTGAACCCAACTTCGACGCCCTGGAGGCCAACCCGTACGAGAACA
CCAAGCAGCGCCAGGAAGCCGAAGTACGCGGACTCCTGAACAAGCTGCAA
CCGGAGATGATCTCGCTGGACCCCAACTTTGTCGGAAAGCTCAACACCAT
CAGCGACAAGAAGAACCGCGAGGAGCGCGATCTCGATCGCAGACCCGAAG
ACCCTATGGAGAAGCTCAAGAACCGTGGTCGGGGTCGCAACAGTGCACTG
CGCAAGTATCTGCGCAAGAAGGGTCGGCGCAATGTCATCGACGACAAGCG
CGTCAAGGCCGAGATGTTGCGCAAGGAGCATGCTGCTCGGCACAAGGAGA
AGTTGCGCTCCGAGAGGGAGAATCTGGGTCCCGCGCTGGCGAGGTTCGCC
AAGAAGGAGATTTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:3330890..3332554-

>CAN33_55205-T1 ID=CAN33_55205-T1|Name=CAN33_55205-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3216bp|location=Sequence derived from alignment at NKJJ01000020.1:3330890..3332554- (Aspergillus niger FDAARGOS_311)
CAAATGAGCGGCTACCTCAAATACACCGACACCTCGACGGGCCAAATGGT
CGCCGAACTGCCTACCCGCCTCGGTGCACCCACCTCCCTCGCCCAGAACC
CATGGAACGCCATCCTACACGTCGGCCACCAAAACGGTACCGTGACTCTC
TGGTCTCCCAACTCTCAAACCGCGCTCGTGAAGGCCCTTGTCCACCGCGG
CCCCGTCCGCTCGATGGCCATCGATCGCCAAGGCCGATACATGGTATCGA
CCGGCCAAGACCAAAAGATGAACGTCTGGGACATCCGCATGTTCCGCGAA
GTACACAGCTACTCATGCTACCAACCCGGCGCATCCGTGTCCATCAGCGA
CCGGAACCTAACAGCCGTAGGCTGGGGCACGCAAGTCAGCGTATGGCGGG
GTCTCTTCGACGCCGCCGCCGCAGACCAAGGCAAGGTACAGAGTCCCTAC
ATGGCCTGGGGCGGTGACGGCCAACGCATCGAAAACATGCGCTGGTGCCC
CTTCGAAGATGTTCTCGGCGTGGGCCACGACCAAGGCTTCGCCAGCATCA
TCGTCCCCGGCGCGGGTGAACCCAACTTCGACGCCCTGGAGGCCAACCCG
TACGAGAACACCAAGCAGCGCCAGGAAGCCGAAGTACGCGGACTCCTGAA
CAAGCTGCAACCGGAGATGATCTCGCTGGACCCCAACTTTGTCGGAAAGC
TCAACACCATCAGCGACAAGAAGAACCGCGAGGAGCGCGATCTCGATCGC
AGACCCGAAGACCCTATGGAGAAGCTCAAGAACCGTGGTCGGGGTCGCAA
CAGTGCACTGCGCAAGTATCTGCGCAAGAAGGGTCGGCGCAATGTCATCG
ACGACAAGCGCGTCAAGGCCGAGATGTTGCGCAAGGAGCATGCTGCTCGG
CACAAGGAGAAGTTGCGCTCCGAGAGGGAGAATCTGGGTCCCGCGCTGGC
GAGGTTCGCCAAGAAGGAGATTTGAATGGCGGGACCAGCAACGACGGCCG
TTGCGCCGGCCGACAACAAGCGCAAGGAAAGCAAAAGAATGATGGAAGCG
CAAAAGACCTACGGCCGGGGTAAATCCATCCACACCCACAGCGTTCGCGA
CAAGAAACTGCGCAGCAACCTCAAAGCCGTGGAAGACAAGTACAAGGAAG
CAGCCCTGAAGGCCAAGGATGCGGAAATCCTGCTCGAGCACGATGCCGGA
TTCCTCGAGCCGGAGGCAGAGCTGGAACGGACGTACAAAGTTCGACAGGA
TGAGATTCGCGAGAGCGTCGGTATCGAAACGGCCAAGAAGGGATTTGAGC
TCAAGTTGACGGACATGGGACCCTACCGCATGGACTACACAAGGAACGGT
CGCGAATTGCTGTTGGCCGGGCGCAAAGGGCATGTGGCAACGATGGACTG
GCGGAATGGAAAGCTGGGATGCGAGTTGCAGTTGAACGAGACTGTGCGCG
ATGCTCGGTGGCTGCACAATAATCAGTTCTTTGCCGTGGCGCAGAAGAGA
TCCGTCTATATCTACGACCACGCCGGTGTGGAACTGCACTGTCTCAACAA
GCATCTCGAGCCTCTTTTCCTTGAATTCCTGCCCTACCACTTCCTCCTTG
CGAGCGCTCAAATGAGCGGCTACCTCAAATACACCGACACCTCGACGGGC
CAAATGGTCGCCGAACTGCCTACCCGCCTCGGTGCACCCACCTCCCTCGC
CCAGAACCCATGGAACGCCATCCTACACGTCGGCCACCAAAACGGTACCG
TGACTCTCTGGTCTCCCAACTCTCAAACCGCGCTCGTGAAGGCCCTTGTC
CACCGCGGCCCCGTCCGCTCGATGGCCATCGATCGCCAAGGCCGATACAT
GGTATCGACCGGCCAAGACCAAAAGATGAACGTCTGGGACATCCGCATGT
TCCGCGAAGTACACAGCTACTCATGCTACCAACCCGGCGCATCCGTGTCC
ATCAGCGACCGGAACCTAACAGCCGTAGGCTGGGGCACGCAAGTCAGCGT
ATGGCGGGGTCTCTTCGACGCCGCCGCCGCAGACCAAGGCAAGGTACAGA
GTCCCTACATGGCCTGGGGCGGTGACGGCCAACGCATCGAAAACATGCGC
TGGTGCCCCTTCGAAGATGTTCTCGGCGTGGGCCACGACCAAGGCTTCGC
CAGCATCATCGTCCCCGGCGCGGGTGAACCCAACTTCGACGCCCTGGAGG
CCAACCCGTACGAGAACACCAAGCAGCGCCAGGAAGCCGAAGTACGCGGA
CTCCTGAACAAGCTGCAACCGGAGATGATCTCGCTGGACCCCAACTTTGT
CGGAAAGCTCAACACCATCAGCGACAAGAAGAACCGCGAGGAGCGCGATC
TCGATCGCAGACCCGAAGACCCTATGGAGAAGCTCAAGAACCGTGGTCGG
GGTCGCAACAGTGCACTGCGCAAGTATCTGCGCAAGAAGGGTCGGCGCAA
TGTCATCGACGACAAGCGCGTCAAGGCCGAGATGTTGCGCAAGGAGCATG
CTGCTCGGCACAAGGAGAAGTTGCGCTCCGAGAGGGAGAATCTGGGTCCC
GCGCTGGCGAGGTTCGCCAAGAAGGAGATTTGAATGGCGGGACCAGCAAC
GACGGCCGTTGCGCCGGCCGACAACAAGCGCAAGGAAAGCAAAAGAATGA
TGGAAGCGCAAAAGACCTACGGCCGGGGTAAATCCATCCACACCCACAGC
GTTCGCGACAAGAAACTGCGCAGCAACCTCAAAGCCGTGGAAGACAAGTA
CAAGGAAGCAGCCCTGAAGGCCAAGGATGCGGAAATCCTGCTCGAGCACG
ATGCCGGATTCCTCGAGCCGGAGGCAGAGCTGGAACGGACGTACAAAGTT
CGACAGGATGAGATTCGCGAGAGCGTCGGTATCGAAACGGCCAAGAAGGG
ATTTGAGCTCAAGTTGACGGACATGGGACCCTACCGCATGGACTACACAA
GGAACGGTCGCGAATTGCTGTTGGCCGGGCGCAAAGGGCATGTGGCAACG
ATGGACTGGCGGAATGGAAAGCTGGGATGCGAGTTGCAGTTGAACGAGAC
TGTGCGCGATGCTCGGTGGCTGCACAATAATCAGTTCTTTGCCGTGGCGC
AGAAGAGATCCGTCTATATCTACGACCACGCCGGTGTGGAACTGCACTGT
CTCAACAAGCATCTCGAGCCTCTTTTCCTTGAATTCCTGCCCTACCACTT
CCTCCTTGCGAGCGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55205CAN33_55205Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55205-T1CAN33_55205-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55205-T1.cdsCAN33_55205-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55205-T1.exon2CAN33_55205-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55205-T1.exon1CAN33_55205-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09261UMG
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR012952
DBxrefPFAM:PF08149
Productsmall nucleolar ribonucleoprotein complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3330890..3332554 -
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