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CAN33_55215-T1, CAN33_55215-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55215-T1
Unique NameCAN33_55215-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3336244..3337373-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55215-T1 ID=CAN33_55215-T1|Name=CAN33_55215-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1130bp|location=Sequence derived from alignment at NKJJ01000020.1:3336244..3337373- (Aspergillus niger FDAARGOS_311)
ATGGCCCAAGATCCCAGAGTTCTGCTCCAACGAGTAATCCCCCCGAACCC
CGCTGTCCATCATCGCTATGCTTGGAATTCGACGATCGCTAACCCCTATG
ACGTACATTAGGCCGACAAAGCGCTTAGCAGCGCATCTGGTGGCTTTAGC
TTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCTGATCTCTACAC
ACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAGTAAGCCAATGATCT
CCCCCCTGTCTCGGATCAACGAGCTCTAACTCGTTGCCAAACACACAGAC
AAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCCTCCATTCAGACCCAGAA
CCTTAACGAGCCCGACGATGCAGCAAACACCCTGACTGAAGCGTTCAAGG
TCTACCGCAAATCCGACCCCGAGGACGCCGCTCGCGTGCTCTCCAGTGCC
ATCCAACACTACGTGCTAAAGGGTAACCTCCGTCGCGCGGCCACGCAACA
GCAACATCTGGCCGAGGTCTATGAGGTGGAACTGGGAGATACGAAGAAGG
CGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGTTCGACGGTGACAATGCT
GAAGCGTACGTCTATCCTCGGCGTTTTCATATACAAATCTAACTTGATGT
GTTGTTCTCCAGACTTGCCAACAAGCACTACCTTAAGGCAGCGGACCTGG
CCGCTCTCGAAGGCGACTACTACAAGGCTATTGAGCACTACGAGCGGATC
GGCCGCTCATCAATCAATAACAACCTGATGAAATGGTCCGTTAAGGACTA
CTTCCTCAAGGCTGGCATCTGCCACTTGGCGACGAATGTACGGCTGTCCT
CATCTGCCCAAACCATTTACACAGTACTGATTCCACACAGGACCTGGTGG
CCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACACCACCTTCGCC
TCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGACCATCGAAGC
CGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTCGACCAGCTCA
GCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGATCAAGAACAGT
ATCGAGGAGCAGGGCGAGGATTTCTCTTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:3336244..3337373-

>CAN33_55215-T1 ID=CAN33_55215-T1|Name=CAN33_55215-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4500bp|location=Sequence derived from alignment at NKJJ01000020.1:3336244..3337373- (Aspergillus niger FDAARGOS_311)
GACCTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACAC
CACCTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGA
CCATCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTC
GACCAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGAT
CAAGAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAGACTTGCCAAC
AAGCACTACCTTAAGGCAGCGGACCTGGCCGCTCTCGAAGGCGACTACTA
CAAGGCTATTGAGCACTACGAGCGGATCGGCCGCTCATCAATCAATAACA
ACCTGATGAAATGGTCCGTTAAGGACTACTTCCTCAAGGCTGGCATCTGC
CACTTGGCGACGAATACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCC
TCCATTCAGACCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCT
GACTGAAGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTC
GCGTGCTCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGT
CGCGCGGCCACGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACT
GGGAGATACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGT
TCGACGGTGACAATGCTGAAGCGCCGACAAAGCGCTTAGCAGCGCATCTG
GTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCT
GATCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAATGG
CCCAAGATCCCAGAGTTCTGCTCCAACGAGTAATCCCCCCGAACCCCGCT
GACCTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACAC
CACCTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGA
CCATCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTC
GACCAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGAT
CAAGAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAGACTTGCCAAC
AAGCACTACCTTAAGGCAGCGGACCTGGCCGCTCTCGAAGGCGACTACTA
CAAGGCTATTGAGCACTACGAGCGGATCGGCCGCTCATCAATCAATAACA
ACCTGATGAAATGGTCCGTTAAGGACTACTTCCTCAAGGCTGGCATCTGC
CACTTGGCGACGAATACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCC
TCCATTCAGACCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCT
GACTGAAGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTC
GCGTGCTCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGT
CGCGCGGCCACGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACT
GGGAGATACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGT
TCGACGGTGACAATGCTGAAGCGCCGACAAAGCGCTTAGCAGCGCATCTG
GTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCT
GATCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAATGG
CCCAAGATCCCAGAGTTCTGCTCCAACGAGTAATCCCCCCGAACCCCGCT
GACCTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACAC
CACCTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGA
CCATCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTC
GACCAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGAT
CAAGAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAGACTTGCCAAC
AAGCACTACCTTAAGGCAGCGGACCTGGCCGCTCTCGAAGGCGACTACTA
CAAGGCTATTGAGCACTACGAGCGGATCGGCCGCTCATCAATCAATAACA
ACCTGATGAAATGGTCCGTTAAGGACTACTTCCTCAAGGCTGGCATCTGC
CACTTGGCGACGAATACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCC
TCCATTCAGACCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCT
GACTGAAGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTC
GCGTGCTCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGT
CGCGCGGCCACGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACT
GGGAGATACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGT
TCGACGGTGACAATGCTGAAGCGCCGACAAAGCGCTTAGCAGCGCATCTG
GTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCT
GATCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAATGG
CCCAAGATCCCAGAGTTCTGCTCCAACGAGTAATCCCCCCGAACCCCGCT
GACCTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACAC
CACCTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGA
CCATCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTC
GACCAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGAT
CAAGAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAGACTTGCCAAC
AAGCACTACCTTAAGGCAGCGGACCTGGCCGCTCTCGAAGGCGACTACTA
CAAGGCTATTGAGCACTACGAGCGGATCGGCCGCTCATCAATCAATAACA
ACCTGATGAAATGGTCCGTTAAGGACTACTTCCTCAAGGCTGGCATCTGC
CACTTGGCGACGAATACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCC
TCCATTCAGACCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCT
GACTGAAGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTC
GCGTGCTCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGT
CGCGCGGCCACGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACT
GGGAGATACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGT
TCGACGGTGACAATGCTGAAGCGCCGACAAAGCGCTTAGCAGCGCATCTG
GTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCT
GATCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAATGG
CCCAAGATCCCAGAGTTCTGCTCCAACGAGTAATCCCCCCGAACCCCGCT
GACCTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACAC
CACCTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGA
CCATCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTC
GACCAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGAT
CAAGAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAGACTTGCCAAC
AAGCACTACCTTAAGGCAGCGGACCTGGCCGCTCTCGAAGGCGACTACTA
CAAGGCTATTGAGCACTACGAGCGGATCGGCCGCTCATCAATCAATAACA
ACCTGATGAAATGGTCCGTTAAGGACTACTTCCTCAAGGCTGGCATCTGC
CACTTGGCGACGAATACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCC
TCCATTCAGACCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCT
GACTGAAGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTC
GCGTGCTCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGT
CGCGCGGCCACGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACT
GGGAGATACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGT
TCGACGGTGACAATGCTGAAGCGCCGACAAAGCGCTTAGCAGCGCATCTG
GTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCT
GATCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAATGG
CCCAAGATCCCAGAGTTCTGCTCCAACGAGTAATCCCCCCGAACCCCGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55215CAN33_55215Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55215-T1CAN33_55215-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55215-T1.cdsCAN33_55215-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55215-T1.exon5CAN33_55215-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_55215-T1.exon4CAN33_55215-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_55215-T1.exon3CAN33_55215-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_55215-T1.exon2CAN33_55215-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55215-T1.exon1CAN33_55215-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09263X22
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR000744
DBxrefPFAM:PF14938
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3336244..3337373 -
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