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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3359190..3360754+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_55255-T1 ID=CAN33_55255-T1|Name=CAN33_55255-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1565bp|location=Sequence derived from alignment at NKJJ01000020.1:3359190..3360754+ (Aspergillus niger FDAARGOS_311)
ATGGAAGCAGAACGGAGTGCGGAGAAGAAGGCGGTGGACGGCGACCGGGA
GACCCTGGCGGCGCAAGTGGAAGGGCAACTGGAACACCATCTGGCCTTTT
CATCTCCCGCCAACTTCCTGCCATCTCATTCATCGCCCACCCAAAACGTC
CACTCGGTTTTTGCAAGTCACTGCGCTGTGCGCTCTTGCATCCCCTTTTT
TCCCGAAACCATTTCAGTTCTTACATAAAAATCTATACACTCCTTCACCA
TGGCGGCGCCCGGCCAGCCGTCCCCTCAGCAGATTGCGGCCATGCAACAG
CAGTTCGCCGCCGAAGCTGCTAGGCGCGGACTGACCCCGAGGAATTTGCC
AAACAGCAGCGCGAACAGCTCACTGCAGAGGCAGCCAAGCACGGAATGAC
CACCGAACAATATGTCACTCAGCTGAGAATGCGAGCTCTTGCCGCTCACC
AGAGACAAGTCGAGGCTCAACGACAAGCTGCTCAAGCCCAAGCGCAGGGC
CAGCCACAAGGGCAAGGGCAAGCACCTCCTCAATCGCCCGCCCAACCAGG
ACAGAACCTGCCAGCACCCCCACAACCTCAACCCCAGCAGGTGACCCGTC
AGGTCCCCGTGAACCCTAACAACCCTCCTGATCCGAAGGCGCTCGCCGTT
GCCGCGTTCCTGCGATCGCAGAACCTGAAGACACGGACGTGTATCATGGA
CGGGCAGCGGAAGGAGATGTTCAAAGGTATACCATTATACCACTCTTCGT
GAATTCCGTGTGTATGGAAGATACTCATAAGTTACAGTGAAACGTGCCAT
TCGCGCCATCGAGTCCCCAGCTTACGCCAAGGCGGCTGCCAAAAAGAACT
CTCTTCTTCCTCCAGTCACCGATCGCGCCTCGGCAGAGAACGTCTTTAAG
CTCCTTCCCCTATCACTTCTTGCTCTGCGGGTGACCAAAGTCGACCCCCA
TGCAGGCCACAACCATGGCAAGTCCAAGAACCGTGTCAAGGGACTGTGGA
CGGTACGCATCGAGCAGCACCAAGAAACCGATCCTATGATGCACTATGTC
TGGCTGTGGGAAGGTCCGCAGTGGAAGCAGAAGGTTATGGCCGCAGCTGT
AGTAGCAGGTATCTTTGCGGTGGTGCTCTTCCCCCTGTGGCCGATGATGC
TGCGTCAGGGTGTCTGGTACCTGAGTGTGGGCATGATGGGTCTGCTGGGA
TTGTTCTTCGCCATGTCCATTTTCCGTCTTATTCTGTTCTGCATCACAGT
CATTGCGGTTCCCCCTGGTCTATGGCTGTTCCCCAACCTGTTCGAAGATG
TTGGGTTCGTGGATAGTTTCAAGCCCCTGTGGGGTTGGCAAGAGGTAAGC
CATCTACCACGATTATCGCAGAAGGAATGACAATCTCTAACCTCTATATC
CAGACCAAGAAGAAAAAGACCAAGAAGTCCAAGAACGTAGGAGGCGAGGA
ACCCCAAGCCGCAACCGCTCCGTCCGCCACCACAACAGCAACAGCAGCCC
CGGATACTTCAGGCACCGTAAAGCGAGACCTTGCGGCGCGCGTGGAGGAA
GTCACCGAAGAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3359190..3360754+ >CAN33_55255-T1 ID=CAN33_55255-T1|Name=CAN33_55255-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4128bp|location=Sequence derived from alignment at NKJJ01000020.1:3359190..3360754+ (Aspergillus niger FDAARGOS_311)
ATGGAAGCAGAACGGAGTGCGGAGAAGAAGGCGGTGGACGGCGACCGGGA
GACCCTGGCGGCGCAAGTGGAAGGGCAACTGGAACACCATCTGGCCTTTT
CATCTCCCGCCAACTTCCTGCCATCTCATTCATCGCCCACCCAAAACGTC
CACTCGGTTTTTGCAAGTCACTGCGCTGTGACCCGTCAGGTCCCCGTGAA
CCCTAACAACCCTCCTGATCCGAAGGCGCTCGCCGTTGCCGCGTTCCTGC
GATCGCAGAACCTGAAGACACGGACGTGTATCATGGACGGGCAGCGGAAG
GAGATGTTCAAAGTGAAACGTGCCATTCGCGCCATCGAGTCCCCAGCTTA
CGCCAAGGCGGCTGCCAAAAAGAACTCTCTTCTTCCTCCAGTCACCGATC
GCGCCTCGGCAGAGAACGTCTTTAAGCTCCTTCCCCTATCACTTCTTGCT
CTGCGGGTGACCAAAGTCGACCCCCATGCAGGCCACAACCATGGCAAGTC
CAAGAACCGTGTCAAGGGACTGTGGACGGTACGCATCGAGCAGCACCAAG
AAACCGATCCTATGATGCACTATGTCTGGCTGTGGGAAGGTCCGCAGTGG
AAGCAGAAGGTTATGGCCGCAGCTGTAGTAGCAGGTATCTTTGCGGTGGT
GCTCTTCCCCCTGTGGCCGATGATGCTGCGTCAGGGTGTCTGGTACCTGA
GTGTGGGCATGATGGGTCTGCTGGGATTGTTCTTCGCCATGTCCATTTTC
CGTCTTATTCTGTTCTGCATCACAGTCATTGCGGTTCCCCCTGGTCTATG
GCTGTTCCCCAACCTGTTCGAAGATGTTGGGTTCGTGGATAGTTTCAAGC
CCCTGTGGGGTTGGCAAGAGACCAAGAAGAAAAAGACCAAGAAGTCCAAG
AACGTAGGAGGCGAGGAACCCCAAGCCGCAACCGCTCCGTCCGCCACCAC
AACAGCAACAGCAGCCCCGGATACTTCAGGCACCGTAAAGCGAGACCTTG
CGGCGCGCGTGGAGGAAGTCACCGAAGAGTAAATGGAAGCAGAACGGAGT
GCGGAGAAGAAGGCGGTGGACGGCGACCGGGAGACCCTGGCGGCGCAAGT
GGAAGGGCAACTGGAACACCATCTGGCCTTTTCATCTCCCGCCAACTTCC
TGCCATCTCATTCATCGCCCACCCAAAACGTCCACTCGGTTTTTGCAAGT
CACTGCGCTGTGACCCGTCAGGTCCCCGTGAACCCTAACAACCCTCCTGA
TCCGAAGGCGCTCGCCGTTGCCGCGTTCCTGCGATCGCAGAACCTGAAGA
CACGGACGTGTATCATGGACGGGCAGCGGAAGGAGATGTTCAAAGTGAAA
CGTGCCATTCGCGCCATCGAGTCCCCAGCTTACGCCAAGGCGGCTGCCAA
AAAGAACTCTCTTCTTCCTCCAGTCACCGATCGCGCCTCGGCAGAGAACG
TCTTTAAGCTCCTTCCCCTATCACTTCTTGCTCTGCGGGTGACCAAAGTC
GACCCCCATGCAGGCCACAACCATGGCAAGTCCAAGAACCGTGTCAAGGG
ACTGTGGACGGTACGCATCGAGCAGCACCAAGAAACCGATCCTATGATGC
ACTATGTCTGGCTGTGGGAAGGTCCGCAGTGGAAGCAGAAGGTTATGGCC
GCAGCTGTAGTAGCAGGTATCTTTGCGGTGGTGCTCTTCCCCCTGTGGCC
GATGATGCTGCGTCAGGGTGTCTGGTACCTGAGTGTGGGCATGATGGGTC
TGCTGGGATTGTTCTTCGCCATGTCCATTTTCCGTCTTATTCTGTTCTGC
ATCACAGTCATTGCGGTTCCCCCTGGTCTATGGCTGTTCCCCAACCTGTT
CGAAGATGTTGGGTTCGTGGATAGTTTCAAGCCCCTGTGGGGTTGGCAAG
AGACCAAGAAGAAAAAGACCAAGAAGTCCAAGAACGTAGGAGGCGAGGAA
CCCCAAGCCGCAACCGCTCCGTCCGCCACCACAACAGCAACAGCAGCCCC
GGATACTTCAGGCACCGTAAAGCGAGACCTTGCGGCGCGCGTGGAGGAAG
TCACCGAAGAGTAAATGGAAGCAGAACGGAGTGCGGAGAAGAAGGCGGTG
GACGGCGACCGGGAGACCCTGGCGGCGCAAGTGGAAGGGCAACTGGAACA
CCATCTGGCCTTTTCATCTCCCGCCAACTTCCTGCCATCTCATTCATCGC
CCACCCAAAACGTCCACTCGGTTTTTGCAAGTCACTGCGCTGTGACCCGT
CAGGTCCCCGTGAACCCTAACAACCCTCCTGATCCGAAGGCGCTCGCCGT
TGCCGCGTTCCTGCGATCGCAGAACCTGAAGACACGGACGTGTATCATGG
ACGGGCAGCGGAAGGAGATGTTCAAAGTGAAACGTGCCATTCGCGCCATC
GAGTCCCCAGCTTACGCCAAGGCGGCTGCCAAAAAGAACTCTCTTCTTCC
TCCAGTCACCGATCGCGCCTCGGCAGAGAACGTCTTTAAGCTCCTTCCCC
TATCACTTCTTGCTCTGCGGGTGACCAAAGTCGACCCCCATGCAGGCCAC
AACCATGGCAAGTCCAAGAACCGTGTCAAGGGACTGTGGACGGTACGCAT
CGAGCAGCACCAAGAAACCGATCCTATGATGCACTATGTCTGGCTGTGGG
AAGGTCCGCAGTGGAAGCAGAAGGTTATGGCCGCAGCTGTAGTAGCAGGT
ATCTTTGCGGTGGTGCTCTTCCCCCTGTGGCCGATGATGCTGCGTCAGGG
TGTCTGGTACCTGAGTGTGGGCATGATGGGTCTGCTGGGATTGTTCTTCG
CCATGTCCATTTTCCGTCTTATTCTGTTCTGCATCACAGTCATTGCGGTT
CCCCCTGGTCTATGGCTGTTCCCCAACCTGTTCGAAGATGTTGGGTTCGT
GGATAGTTTCAAGCCCCTGTGGGGTTGGCAAGAGACCAAGAAGAAAAAGA
CCAAGAAGTCCAAGAACGTAGGAGGCGAGGAACCCCAAGCCGCAACCGCT
CCGTCCGCCACCACAACAGCAACAGCAGCCCCGGATACTTCAGGCACCGT
AAAGCGAGACCTTGCGGCGCGCGTGGAGGAAGTCACCGAAGAGTAAATGG
AAGCAGAACGGAGTGCGGAGAAGAAGGCGGTGGACGGCGACCGGGAGACC
CTGGCGGCGCAAGTGGAAGGGCAACTGGAACACCATCTGGCCTTTTCATC
TCCCGCCAACTTCCTGCCATCTCATTCATCGCCCACCCAAAACGTCCACT
CGGTTTTTGCAAGTCACTGCGCTGTGACCCGTCAGGTCCCCGTGAACCCT
AACAACCCTCCTGATCCGAAGGCGCTCGCCGTTGCCGCGTTCCTGCGATC
GCAGAACCTGAAGACACGGACGTGTATCATGGACGGGCAGCGGAAGGAGA
TGTTCAAAGTGAAACGTGCCATTCGCGCCATCGAGTCCCCAGCTTACGCC
AAGGCGGCTGCCAAAAAGAACTCTCTTCTTCCTCCAGTCACCGATCGCGC
CTCGGCAGAGAACGTCTTTAAGCTCCTTCCCCTATCACTTCTTGCTCTGC
GGGTGACCAAAGTCGACCCCCATGCAGGCCACAACCATGGCAAGTCCAAG
AACCGTGTCAAGGGACTGTGGACGGTACGCATCGAGCAGCACCAAGAAAC
CGATCCTATGATGCACTATGTCTGGCTGTGGGAAGGTCCGCAGTGGAAGC
AGAAGGTTATGGCCGCAGCTGTAGTAGCAGGTATCTTTGCGGTGGTGCTC
TTCCCCCTGTGGCCGATGATGCTGCGTCAGGGTGTCTGGTACCTGAGTGT
GGGCATGATGGGTCTGCTGGGATTGTTCTTCGCCATGTCCATTTTCCGTC
TTATTCTGTTCTGCATCACAGTCATTGCGGTTCCCCCTGGTCTATGGCTG
TTCCCCAACCTGTTCGAAGATGTTGGGTTCGTGGATAGTTTCAAGCCCCT
GTGGGGTTGGCAAGAGACCAAGAAGAAAAAGACCAAGAAGTCCAAGAACG
TAGGAGGCGAGGAACCCCAAGCCGCAACCGCTCCGTCCGCCACCACAACA
GCAACAGCAGCCCCGGATACTTCAGGCACCGTAAAGCGAGACCTTGCGGC
GCGCGTGGAGGAAGTCACCGAAGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030176 | integral component of endoplasmic reticulum membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015031 | protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263W7L |
| DBxref | InterPro:IPR011553 |
| DBxref | InterPro:IPR004728 |
| DBxref | PFAM:PF03839 |
| Product | protein translocation protein Sec62 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3359190..3360754 + |
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