You are here

CAN33_55335-T1, CAN33_55335-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55335-T1
Unique NameCAN33_55335-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3410858..3411657+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55335-T1 ID=CAN33_55335-T1|Name=CAN33_55335-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=800bp|location=Sequence derived from alignment at NKJJ01000020.1:3410858..3411657+ (Aspergillus niger FDAARGOS_311)
ATGTCTACCTCTTCGGGTCTGCTCTATGCGGCCTCAAGAATCGATCCTCC ATCGAAAATATCAGCAGATGTCTTCAACGCCTGGTATGATGGCGTCCATG TGCCTGATGTCCTTAAGACCTCGGGAATCAACACCGCAGTCCGCTATGAA ACGGCTGTAGTGCCCCAAGACAGTTCCCCGTGGGCGTTCCTTGCTCTCTA CCCTGTTCCAGACATTGAGTTCTTAAACACGGAGGAGTTCGCGAGCATTC CAGCGACTAGTGATGCTCTGCCGGGGCCAACACACAGTTGCATGGATATA GCGCAGTTCGATATCAGGCGATACCGCGAGGTCGGGAAGCGACACGACTT GGATATGCCAACAGGTGAGTATATGTGAGAGAAGAGAAGGGAAGAGCAAA GCTGATTCACTTCTTCTAATAATGTTGGATGTGTTAGGACCAACGTCGCA TCTTCTTACTGTGGAATTTGACTTGCCTTCACACATTGACATATCTGATG ACCAGGCTGTACTGGACTGGTTCTGTGGGATATACAGTGGTGGCACGCCT CAGCGGGTTGCCATTCATGAAGTCTTCTGGGCTATGTTGTACCCGAACGA GAAACCAGCAGAGGTGCCACGTTGTTTGGCGGTGGTAAGCTGTGGTGTTC TTTCCCCATTTGCCATCATCTTGACTGATAGAATGATGATAGCTCGAATT CCACGGCGATGAGAATGTGTACGATGAAGCCATCAAAGAGATCCAATTGG TTGCGAAGGTTGGCCAATGGAAACTGCACAAGGCCTTTGGCTGGCCATAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:3410858..3411657+

>CAN33_55335-T1 ID=CAN33_55335-T1|Name=CAN33_55335-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2007bp|location=Sequence derived from alignment at NKJJ01000020.1:3410858..3411657+ (Aspergillus niger FDAARGOS_311)
ATGTCTACCTCTTCGGGTCTGCTCTATGCGGCCTCAAGAATCGATCCTCC
ATCGAAAATATCAGCAGATGTCTTCAACGCCTGGTATGATGGCGTCCATG
TGCCTGATGTCCTTAAGACCTCGGGAATCAACACCGCAGTCCGCTATGAA
ACGGCTGTAGTGCCCCAAGACAGTTCCCCGTGGGCGTTCCTTGCTCTCTA
CCCTGTTCCAGACATTGAGTTCTTAAACACGGAGGAGTTCGCGAGCATTC
CAGCGACTAGTGATGCTCTGCCGGGGCCAACACACAGTTGCATGGATATA
GCGCAGTTCGATATCAGGCGATACCGCGAGGTCGGGAAGCGACACGACTT
GGATATGCCAACAGGACCAACGTCGCATCTTCTTACTGTGGAATTTGACT
TGCCTTCACACATTGACATATCTGATGACCAGGCTGTACTGGACTGGTTC
TGTGGGATATACAGTGGTGGCACGCCTCAGCGGGTTGCCATTCATGAAGT
CTTCTGGGCTATGTTGTACCCGAACGAGAAACCAGCAGAGGTGCCACGTT
GTTTGGCGGTGCTCGAATTCCACGGCGATGAGAATGTGTACGATGAAGCC
ATCAAAGAGATCCAATTGGTTGCGAAGGTTGGCCAATGGAAACTGCACAA
GGCCTTTGGCTGGCCATAAATGTCTACCTCTTCGGGTCTGCTCTATGCGG
CCTCAAGAATCGATCCTCCATCGAAAATATCAGCAGATGTCTTCAACGCC
TGGTATGATGGCGTCCATGTGCCTGATGTCCTTAAGACCTCGGGAATCAA
CACCGCAGTCCGCTATGAAACGGCTGTAGTGCCCCAAGACAGTTCCCCGT
GGGCGTTCCTTGCTCTCTACCCTGTTCCAGACATTGAGTTCTTAAACACG
GAGGAGTTCGCGAGCATTCCAGCGACTAGTGATGCTCTGCCGGGGCCAAC
ACACAGTTGCATGGATATAGCGCAGTTCGATATCAGGCGATACCGCGAGG
TCGGGAAGCGACACGACTTGGATATGCCAACAGGACCAACGTCGCATCTT
CTTACTGTGGAATTTGACTTGCCTTCACACATTGACATATCTGATGACCA
GGCTGTACTGGACTGGTTCTGTGGGATATACAGTGGTGGCACGCCTCAGC
GGGTTGCCATTCATGAAGTCTTCTGGGCTATGTTGTACCCGAACGAGAAA
CCAGCAGAGGTGCCACGTTGTTTGGCGGTGCTCGAATTCCACGGCGATGA
GAATGTGTACGATGAAGCCATCAAAGAGATCCAATTGGTTGCGAAGGTTG
GCCAATGGAAACTGCACAAGGCCTTTGGCTGGCCATAAATGTCTACCTCT
TCGGGTCTGCTCTATGCGGCCTCAAGAATCGATCCTCCATCGAAAATATC
AGCAGATGTCTTCAACGCCTGGTATGATGGCGTCCATGTGCCTGATGTCC
TTAAGACCTCGGGAATCAACACCGCAGTCCGCTATGAAACGGCTGTAGTG
CCCCAAGACAGTTCCCCGTGGGCGTTCCTTGCTCTCTACCCTGTTCCAGA
CATTGAGTTCTTAAACACGGAGGAGTTCGCGAGCATTCCAGCGACTAGTG
ATGCTCTGCCGGGGCCAACACACAGTTGCATGGATATAGCGCAGTTCGAT
ATCAGGCGATACCGCGAGGTCGGGAAGCGACACGACTTGGATATGCCAAC
AGGACCAACGTCGCATCTTCTTACTGTGGAATTTGACTTGCCTTCACACA
TTGACATATCTGATGACCAGGCTGTACTGGACTGGTTCTGTGGGATATAC
AGTGGTGGCACGCCTCAGCGGGTTGCCATTCATGAAGTCTTCTGGGCTAT
GTTGTACCCGAACGAGAAACCAGCAGAGGTGCCACGTTGTTTGGCGGTGC
TCGAATTCCACGGCGATGAGAATGTGTACGATGAAGCCATCAAAGAGATC
CAATTGGTTGCGAAGGTTGGCCAATGGAAACTGCACAAGGCCTTTGGCTG
GCCATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55335CAN33_55335Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55335-T1.exon1CAN33_55335-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_55335-T1.exon2CAN33_55335-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55335-T1.exon3CAN33_55335-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55335-T1.cdsCAN33_55335-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55335-T1CAN33_55335-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3410858..3411657 +