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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3440090..3440741- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_55380-T1 ID=CAN33_55380-T1|Name=CAN33_55380-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=652bp|location=Sequence derived from alignment at NKJJ01000020.1:3440090..3440741- (Aspergillus niger FDAARGOS_311)
ATGGCTCGTCGTTCGTCGCGTATCGCCCAAGCGGCCGAGGTCGCGCCTCA
TCCGCCCGTCTCCAAGTACGTCGACCCCGTCGACCCCGTCGACGAAGAGG
ACTATGTACCTTCACCACCACCTCAACCACAACCACAACCACAACCACAA
GAGGAACCCGTCGCAATTATTGAGGAAGAAGAGCCTCCGAAGCCCGCTCC
TGCACCCGTCAATGTGGAAGTGAAGACCAAGTTTCCCGTCGCGCGTATAA
AGCGCATCATGCAAGCCGATGAAGATGTCGGTAAAGTCGCTCAAGTTACT
CCTATCGCAGTGTGTAAGTTGCCACCCTCATCTCAACTGATTATTGCGAA
ATGTTTTGAATATTAATGCTAATCATAATTGCCTTACAGCCAAAGCTCTC
GAACTCTTCATGATTTCCCTCGTCACCAAAGCCGCCCGCGAAGCCAAAGA
CCGCAACTCGAAACGCGTCACAGCCTCGCATCTCAAACAAGCCGTCGTTA
AAGACGAAGTGCTCGACTTCCTCGCTGACATCATCGCCAAGGTTCCTGAT
CAACCGGCTAGTCGGAAACACGACGACGATAACAGTGATCAGAATGAACA
ACAACCGAAACGAAAGCGCGGTGGACGTCGTCCGAAAGAAGAGAGTGATT
AA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3440090..3440741- >CAN33_55380-T1 ID=CAN33_55380-T1|Name=CAN33_55380-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1521bp|location=Sequence derived from alignment at NKJJ01000020.1:3440090..3440741- (Aspergillus niger FDAARGOS_311)
CCAAAGCTCTCGAACTCTTCATGATTTCCCTCGTCACCAAAGCCGCCCGC
GAAGCCAAAGACCGCAACTCGAAACGCGTCACAGCCTCGCATCTCAAACA
AGCCGTCGTTAAAGACGAAGTGCTCGACTTCCTCGCTGACATCATCGCCA
AGGTTCCTGATCAACCGGCTAGTCGGAAACACGACGACGATAACAGTGAT
CAGAATGAACAACAACCGAAACGAAAGCGCGGTGGACGTCGTCCGAAAGA
AGAGAGTGATTAAGAAGAAGAGCCTCCGAAGCCCGCTCCTGCACCCGTCA
ATGTGGAAGTGAAGACCAAGTTTCCCGTCGCGCGTATAAAGCGCATCATG
CAAGCCGATGAAGATGTCGGTAAAGTCGCTCAAGTTACTCCTATCGCAGT
GTATGGCTCGTCGTTCGTCGCGTATCGCCCAAGCGGCCGAGGTCGCGCCT
CATCCGCCCGTCTCCAAGTACGTCGACCCCGTCGACCCCGTCGACGAAGA
GGACTATCCAAAGCTCTCGAACTCTTCATGATTTCCCTCGTCACCAAAGC
CGCCCGCGAAGCCAAAGACCGCAACTCGAAACGCGTCACAGCCTCGCATC
TCAAACAAGCCGTCGTTAAAGACGAAGTGCTCGACTTCCTCGCTGACATC
ATCGCCAAGGTTCCTGATCAACCGGCTAGTCGGAAACACGACGACGATAA
CAGTGATCAGAATGAACAACAACCGAAACGAAAGCGCGGTGGACGTCGTC
CGAAAGAAGAGAGTGATTAAGAAGAAGAGCCTCCGAAGCCCGCTCCTGCA
CCCGTCAATGTGGAAGTGAAGACCAAGTTTCCCGTCGCGCGTATAAAGCG
CATCATGCAAGCCGATGAAGATGTCGGTAAAGTCGCTCAAGTTACTCCTA
TCGCAGTGTATGGCTCGTCGTTCGTCGCGTATCGCCCAAGCGGCCGAGGT
CGCGCCTCATCCGCCCGTCTCCAAGTACGTCGACCCCGTCGACCCCGTCG
ACGAAGAGGACTATCCAAAGCTCTCGAACTCTTCATGATTTCCCTCGTCA
CCAAAGCCGCCCGCGAAGCCAAAGACCGCAACTCGAAACGCGTCACAGCC
TCGCATCTCAAACAAGCCGTCGTTAAAGACGAAGTGCTCGACTTCCTCGC
TGACATCATCGCCAAGGTTCCTGATCAACCGGCTAGTCGGAAACACGACG
ACGATAACAGTGATCAGAATGAACAACAACCGAAACGAAAGCGCGGTGGA
CGTCGTCCGAAAGAAGAGAGTGATTAAGAAGAAGAGCCTCCGAAGCCCGC
TCCTGCACCCGTCAATGTGGAAGTGAAGACCAAGTTTCCCGTCGCGCGTA
TAAAGCGCATCATGCAAGCCGATGAAGATGTCGGTAAAGTCGCTCAAGTT
ACTCCTATCGCAGTGTATGGCTCGTCGTTCGTCGCGTATCGCCCAAGCGG
CCGAGGTCGCGCCTCATCCGCCCGTCTCCAAGTACGTCGACCCCGTCGAC
CCCGTCGACGAAGAGGACTAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003958 |
| DBxref | InterPro:IPR009072 |
| DBxref | PFAM:PF00808 |
| Product | Histone-like transcription factor (CBF/NF-Y) and archaeal histone family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3440090..3440741 - |
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