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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3471257..3472159- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_55440-T1 ID=CAN33_55440-T1|Name=CAN33_55440-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=903bp|location=Sequence derived from alignment at NKJJ01000020.1:3471257..3472159- (Aspergillus niger FDAARGOS_311)
ATGAGCCAGGTTATACTAGTTACTGGCGCCAGTCGAGGTAAGCGATATCC
TGTTCTCGCGAGCTGCAGCTAACCCGGTGTAGGCATCGGCAAAGGACTTG
TGGCACATTATCTCGCCCAGCCCAGGACTACAGTCATCGCAACTGTGCGG
GACACCACATCCCCAAAAGCAAAGGAGCTCACTATCCTCCAAAAGGGCGA
TAAATCCCACCTAATTGTTGTAAAGCTCATAGCCGACGATCCGGTTAGCG
CTACGGCAGCCACATCCGAAATTCGGACGCAGAACCTTAATCACATTGAC
ATTGCAATTGCAAATGCGGGAATTTGCGATCACTGGGGCCCTGTTGTGGA
ATCTACAGAGCAGGACGTGCTCTCCAACTTTGAAGTCAATACCCTGGGGC
CTCTCCGGCTTTTCAAGGCTGTAGCTCCTCTGCTGCAGAACGCTAAGACT
CCGAAGTTTATTTATATTTCTACTCTTCTGGCTAGCATTGGTGGGATTGG
CAACATGTTTACCCTTACCGGGCCATATGGAATGTCGAAGGCGGCTGGAA
ATTTTCTGGTCAGAAAGATCCATGCTGAAAACGAGCATTTGACTACCTTG
TCTATAGACCCTGGGTAGGTGCAGATCATTCATTCCACTATAAGCTTGAG
AGTTAGCAGGCTAACATGGCTATAAGGCTCGTTCAAACAGACTTGGGTGA
TCGTGCGGCGAAGCACTATGGAATGGAACAAGCTCCGGTGACGCTTGAGG
AGTGCGTTAGTGGAATCATTACTCAGGTGATCGCAACAATTGGCAGCCAT
TACAATTACAAGACAACTAATGCCATTACAGATTGAGAGAGCGGACCGCT
CGTCCACGTCGGGCTCATTTGTCAATGCAAATGGAGAGTTTGTGGCTTGG
TAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3471257..3472159- >CAN33_55440-T1 ID=CAN33_55440-T1|Name=CAN33_55440-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2964bp|location=Sequence derived from alignment at NKJJ01000020.1:3471257..3472159- (Aspergillus niger FDAARGOS_311)
ATTGAGAGAGCGGACCGCTCGTCCACGTCGGGCTCATTTGTCAATGCAAA
TGGAGAGTTTGTGGCTTGGTAAGCTCGTTCAAACAGACTTGGGTGATCGT
GCGGCGAAGCACTATGGAATGGAACAAGCTCCGGTGACGCTTGAGGAGTG
CGTTAGTGGAATCATTACTCAGGCATCGGCAAAGGACTTGTGGCACATTA
TCTCGCCCAGCCCAGGACTACAGTCATCGCAACTGTGCGGGACACCACAT
CCCCAAAAGCAAAGGAGCTCACTATCCTCCAAAAGGGCGATAAATCCCAC
CTAATTGTTGTAAAGCTCATAGCCGACGATCCGGTTAGCGCTACGGCAGC
CACATCCGAAATTCGGACGCAGAACCTTAATCACATTGACATTGCAATTG
CAAATGCGGGAATTTGCGATCACTGGGGCCCTGTTGTGGAATCTACAGAG
CAGGACGTGCTCTCCAACTTTGAAGTCAATACCCTGGGGCCTCTCCGGCT
TTTCAAGGCTGTAGCTCCTCTGCTGCAGAACGCTAAGACTCCGAAGTTTA
TTTATATTTCTACTCTTCTGGCTAGCATTGGTGGGATTGGCAACATGTTT
ACCCTTACCGGGCCATATGGAATGTCGAAGGCGGCTGGAAATTTTCTGGT
CAGAAAGATCCATGCTGAAAACGAGCATTTGACTACCTTGTCTATAGACC
CTGGATGAGCCAGGTTATACTAGTTACTGGCGCCAGTCGAGATTGAGAGA
GCGGACCGCTCGTCCACGTCGGGCTCATTTGTCAATGCAAATGGAGAGTT
TGTGGCTTGGTAAGCTCGTTCAAACAGACTTGGGTGATCGTGCGGCGAAG
CACTATGGAATGGAACAAGCTCCGGTGACGCTTGAGGAGTGCGTTAGTGG
AATCATTACTCAGGCATCGGCAAAGGACTTGTGGCACATTATCTCGCCCA
GCCCAGGACTACAGTCATCGCAACTGTGCGGGACACCACATCCCCAAAAG
CAAAGGAGCTCACTATCCTCCAAAAGGGCGATAAATCCCACCTAATTGTT
GTAAAGCTCATAGCCGACGATCCGGTTAGCGCTACGGCAGCCACATCCGA
AATTCGGACGCAGAACCTTAATCACATTGACATTGCAATTGCAAATGCGG
GAATTTGCGATCACTGGGGCCCTGTTGTGGAATCTACAGAGCAGGACGTG
CTCTCCAACTTTGAAGTCAATACCCTGGGGCCTCTCCGGCTTTTCAAGGC
TGTAGCTCCTCTGCTGCAGAACGCTAAGACTCCGAAGTTTATTTATATTT
CTACTCTTCTGGCTAGCATTGGTGGGATTGGCAACATGTTTACCCTTACC
GGGCCATATGGAATGTCGAAGGCGGCTGGAAATTTTCTGGTCAGAAAGAT
CCATGCTGAAAACGAGCATTTGACTACCTTGTCTATAGACCCTGGATGAG
CCAGGTTATACTAGTTACTGGCGCCAGTCGAGATTGAGAGAGCGGACCGC
TCGTCCACGTCGGGCTCATTTGTCAATGCAAATGGAGAGTTTGTGGCTTG
GTAAGCTCGTTCAAACAGACTTGGGTGATCGTGCGGCGAAGCACTATGGA
ATGGAACAAGCTCCGGTGACGCTTGAGGAGTGCGTTAGTGGAATCATTAC
TCAGGCATCGGCAAAGGACTTGTGGCACATTATCTCGCCCAGCCCAGGAC
TACAGTCATCGCAACTGTGCGGGACACCACATCCCCAAAAGCAAAGGAGC
TCACTATCCTCCAAAAGGGCGATAAATCCCACCTAATTGTTGTAAAGCTC
ATAGCCGACGATCCGGTTAGCGCTACGGCAGCCACATCCGAAATTCGGAC
GCAGAACCTTAATCACATTGACATTGCAATTGCAAATGCGGGAATTTGCG
ATCACTGGGGCCCTGTTGTGGAATCTACAGAGCAGGACGTGCTCTCCAAC
TTTGAAGTCAATACCCTGGGGCCTCTCCGGCTTTTCAAGGCTGTAGCTCC
TCTGCTGCAGAACGCTAAGACTCCGAAGTTTATTTATATTTCTACTCTTC
TGGCTAGCATTGGTGGGATTGGCAACATGTTTACCCTTACCGGGCCATAT
GGAATGTCGAAGGCGGCTGGAAATTTTCTGGTCAGAAAGATCCATGCTGA
AAACGAGCATTTGACTACCTTGTCTATAGACCCTGGATGAGCCAGGTTAT
ACTAGTTACTGGCGCCAGTCGAGATTGAGAGAGCGGACCGCTCGTCCACG
TCGGGCTCATTTGTCAATGCAAATGGAGAGTTTGTGGCTTGGTAAGCTCG
TTCAAACAGACTTGGGTGATCGTGCGGCGAAGCACTATGGAATGGAACAA
GCTCCGGTGACGCTTGAGGAGTGCGTTAGTGGAATCATTACTCAGGCATC
GGCAAAGGACTTGTGGCACATTATCTCGCCCAGCCCAGGACTACAGTCAT
CGCAACTGTGCGGGACACCACATCCCCAAAAGCAAAGGAGCTCACTATCC
TCCAAAAGGGCGATAAATCCCACCTAATTGTTGTAAAGCTCATAGCCGAC
GATCCGGTTAGCGCTACGGCAGCCACATCCGAAATTCGGACGCAGAACCT
TAATCACATTGACATTGCAATTGCAAATGCGGGAATTTGCGATCACTGGG
GCCCTGTTGTGGAATCTACAGAGCAGGACGTGCTCTCCAACTTTGAAGTC
AATACCCTGGGGCCTCTCCGGCTTTTCAAGGCTGTAGCTCCTCTGCTGCA
GAACGCTAAGACTCCGAAGTTTATTTATATTTCTACTCTTCTGGCTAGCA
TTGGTGGGATTGGCAACATGTTTACCCTTACCGGGCCATATGGAATGTCG
AAGGCGGCTGGAAATTTTCTGGTCAGAAAGATCCATGCTGAAAACGAGCA
TTTGACTACCTTGTCTATAGACCCTGGATGAGCCAGGTTATACTAGTTAC
TGGCGCCAGTCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF01370 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3471257..3472159 - |
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