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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1101056..1102114- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5560-T1 ID=CAN33_5560-T1|Name=CAN33_5560-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1059bp|location=Sequence derived from alignment at NKJJ01000019.1:1101056..1102114- (Aspergillus niger FDAARGOS_311)
ATGGCTACGAGAAGCGACTGCAATGTTCACGGCCTTGAGTTCCGTGAAGC
AAAACCCTCGCAGGGGGATCCTGCTCGTCCTGTTGCTGATCTCTTTCGTC
TCGATAATCGCACCATCATAAGTATATCTCCTGAAAGTTCGAATTACTGT
TATTGATCTGCTAATAACGGAGTTCATATACAGTCACCGGCGCCACAGGC
TTCCTAGGTACCACGCTCGCCATTGCCATTCTCGAAAGTGGCGGCGATAT
CGTCTGTCTTGATCTTGCATCCGCCCCGAATTCCCCAGATTGGAGTACAT
ACTTCTATAACCCCTATCTAATTAAGGGATGAAAGTGCCTCTAACTAGAG
CCTGATTACAGATAAAGTCGAAGCCGCCGCACAAAAGCATGCACGCCAAC
TAAGCTATTACCCCTCGACGTAACGGACGAATCCGGCGTAGAAAAAACAT
TCACCCAATTCATCCCTACCCTACGATACCCGCTGAAGGGTGTTGTTGCC
TGCGCAGGCCTATCCCGTAATGGCCCCGCGACCGAATTCCCCGTCTCGTC
GTTCCGCCGTATGCTAGATATCAATGTCACGGGAACGTTTCTTGTCGCAC
AAGCAGCGGCTAGGGAAATGCTCAGGACAAATACTACCGGAAGCATGGTG
TTTGTGGCTAGTATGAGCGGCTACGTGTCGAATAAGGTCGGGACACTATC
TTCTGTGGTTGTGGAGGAGTGGACTGACATGTCACTAGGGTGTTGATACA
GCCGGATACAACGCCTCCAAAGCGGCCGTTCATCAACTCACGCGCTCTTT
GGCTGCCGAGTGGGGATCAAGGGTCGGCATGCCCCTGATCAGGGTCAATT
CGCTCTCACCTGGGTATATTCGGACGGCCGCGACGGCAGAGGCGCTTCAG
AAGCCAGGGATGGAGAGTCAGTGGGTGGGTGATAATATGCTGTTTCGGTT
AAGCACGGCGGATGAATTTCGGGCACCGGTGCTTTTCATGCTTGGGGATG
GGAGTAGTTTTATGACAGGGGCGGATCTGCGAGTTGATGGAGGGCATTGT
GCTTGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1101056..1102114- >CAN33_5560-T1 ID=CAN33_5560-T1|Name=CAN33_5560-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3192bp|location=Sequence derived from alignment at NKJJ01000019.1:1101056..1102114- (Aspergillus niger FDAARGOS_311)
GGTGTTGATACAGCCGGATACAACGCCTCCAAAGCGGCCGTTCATCAACT
CACGCGCTCTTTGGCTGCCGAGTGGGGATCAAGGGTCGGCATGCCCCTGA
TCAGGGTCAATTCGCTCTCACCTGGGTATATTCGGACGGCCGCGACGGCA
GAGGCGCTTCAGAAGCCAGGGATGGAGAGTCAGTGGGTGGGTGATAATAT
GCTGTTTCGGTTAAGCACGGCGGATGAATTTCGGGCACCGGTGCTTTTCA
TGCTTGGGGATGGGAGTAGTTTTATGACAGGGGCGGATCTGCGAGTTGAT
GGAGGGCATTGTGCTTGGTAGAAAAAACATTCACCCAATTCATCCCTACC
CTACGATACCCGCTGAAGGGTGTTGTTGCCTGCGCAGGCCTATCCCGTAA
TGGCCCCGCGACCGAATTCCCCGTCTCGTCGTTCCGCCGTATGCTAGATA
TCAATGTCACGGGAACGTTTCTTGTCGCACAAGCAGCGGCTAGGGAAATG
CTCAGGACAAATACTACCGGAAGCATGGTGTTTGTGGCTAGTATGAGCGG
CTACGTGTCGAATAAGTCACCGGCGCCACAGGCTTCCTAGGTACCACGCT
CGCCATTGCCATTCTCGAAAGTGGCGGCGATATCGTCTGTCTTGATCTTG
CATCCGCCCCGAATTCCCCAGATTGGAATGGCTACGAGAAGCGACTGCAA
TGTTCACGGCCTTGAGTTCCGTGAAGCAAAACCCTCGCAGGGGGATCCTG
CTCGTCCTGTTGCTGATCTCTTTCGTCTCGATAATCGCACCATCATAAGG
TGTTGATACAGCCGGATACAACGCCTCCAAAGCGGCCGTTCATCAACTCA
CGCGCTCTTTGGCTGCCGAGTGGGGATCAAGGGTCGGCATGCCCCTGATC
AGGGTCAATTCGCTCTCACCTGGGTATATTCGGACGGCCGCGACGGCAGA
GGCGCTTCAGAAGCCAGGGATGGAGAGTCAGTGGGTGGGTGATAATATGC
TGTTTCGGTTAAGCACGGCGGATGAATTTCGGGCACCGGTGCTTTTCATG
CTTGGGGATGGGAGTAGTTTTATGACAGGGGCGGATCTGCGAGTTGATGG
AGGGCATTGTGCTTGGTAGAAAAAACATTCACCCAATTCATCCCTACCCT
ACGATACCCGCTGAAGGGTGTTGTTGCCTGCGCAGGCCTATCCCGTAATG
GCCCCGCGACCGAATTCCCCGTCTCGTCGTTCCGCCGTATGCTAGATATC
AATGTCACGGGAACGTTTCTTGTCGCACAAGCAGCGGCTAGGGAAATGCT
CAGGACAAATACTACCGGAAGCATGGTGTTTGTGGCTAGTATGAGCGGCT
ACGTGTCGAATAAGTCACCGGCGCCACAGGCTTCCTAGGTACCACGCTCG
CCATTGCCATTCTCGAAAGTGGCGGCGATATCGTCTGTCTTGATCTTGCA
TCCGCCCCGAATTCCCCAGATTGGAATGGCTACGAGAAGCGACTGCAATG
TTCACGGCCTTGAGTTCCGTGAAGCAAAACCCTCGCAGGGGGATCCTGCT
CGTCCTGTTGCTGATCTCTTTCGTCTCGATAATCGCACCATCATAAGGTG
TTGATACAGCCGGATACAACGCCTCCAAAGCGGCCGTTCATCAACTCACG
CGCTCTTTGGCTGCCGAGTGGGGATCAAGGGTCGGCATGCCCCTGATCAG
GGTCAATTCGCTCTCACCTGGGTATATTCGGACGGCCGCGACGGCAGAGG
CGCTTCAGAAGCCAGGGATGGAGAGTCAGTGGGTGGGTGATAATATGCTG
TTTCGGTTAAGCACGGCGGATGAATTTCGGGCACCGGTGCTTTTCATGCT
TGGGGATGGGAGTAGTTTTATGACAGGGGCGGATCTGCGAGTTGATGGAG
GGCATTGTGCTTGGTAGAAAAAACATTCACCCAATTCATCCCTACCCTAC
GATACCCGCTGAAGGGTGTTGTTGCCTGCGCAGGCCTATCCCGTAATGGC
CCCGCGACCGAATTCCCCGTCTCGTCGTTCCGCCGTATGCTAGATATCAA
TGTCACGGGAACGTTTCTTGTCGCACAAGCAGCGGCTAGGGAAATGCTCA
GGACAAATACTACCGGAAGCATGGTGTTTGTGGCTAGTATGAGCGGCTAC
GTGTCGAATAAGTCACCGGCGCCACAGGCTTCCTAGGTACCACGCTCGCC
ATTGCCATTCTCGAAAGTGGCGGCGATATCGTCTGTCTTGATCTTGCATC
CGCCCCGAATTCCCCAGATTGGAATGGCTACGAGAAGCGACTGCAATGTT
CACGGCCTTGAGTTCCGTGAAGCAAAACCCTCGCAGGGGGATCCTGCTCG
TCCTGTTGCTGATCTCTTTCGTCTCGATAATCGCACCATCATAAGGTGTT
GATACAGCCGGATACAACGCCTCCAAAGCGGCCGTTCATCAACTCACGCG
CTCTTTGGCTGCCGAGTGGGGATCAAGGGTCGGCATGCCCCTGATCAGGG
TCAATTCGCTCTCACCTGGGTATATTCGGACGGCCGCGACGGCAGAGGCG
CTTCAGAAGCCAGGGATGGAGAGTCAGTGGGTGGGTGATAATATGCTGTT
TCGGTTAAGCACGGCGGATGAATTTCGGGCACCGGTGCTTTTCATGCTTG
GGGATGGGAGTAGTTTTATGACAGGGGCGGATCTGCGAGTTGATGGAGGG
CATTGTGCTTGGTAGAAAAAACATTCACCCAATTCATCCCTACCCTACGA
TACCCGCTGAAGGGTGTTGTTGCCTGCGCAGGCCTATCCCGTAATGGCCC
CGCGACCGAATTCCCCGTCTCGTCGTTCCGCCGTATGCTAGATATCAATG
TCACGGGAACGTTTCTTGTCGCACAAGCAGCGGCTAGGGAAATGCTCAGG
ACAAATACTACCGGAAGCATGGTGTTTGTGGCTAGTATGAGCGGCTACGT
GTCGAATAAGTCACCGGCGCCACAGGCTTCCTAGGTACCACGCTCGCCAT
TGCCATTCTCGAAAGTGGCGGCGATATCGTCTGTCTTGATCTTGCATCCG
CCCCGAATTCCCCAGATTGGAATGGCTACGAGAAGCGACTGCAATGTTCA
CGGCCTTGAGTTCCGTGAAGCAAAACCCTCGCAGGGGGATCCTGCTCGTC
CTGTTGCTGATCTCTTTCGTCTCGATAATCGCACCATCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF01370 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1101056..1102114 - |
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