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CAN33_55740-T1, CAN33_55740-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55740-T1
Unique NameCAN33_55740-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3640742..3641520+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55740-T1 ID=CAN33_55740-T1|Name=CAN33_55740-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=779bp|location=Sequence derived from alignment at NKJJ01000020.1:3640742..3641520+ (Aspergillus niger FDAARGOS_311)
ATGGCGCACAAAATCACAGTCACCCTGCCCCAGCTGGCCAAGATGATCGA
CCACTCGCTCCTCCACCCCACCATGACCGACGCCGACATCATAGCCGGCC
TTAAAATTGCCCGCGACAACCACGTCGCAACCGCCTGCGTCAAACCCTAC
GCCATCCCCTTAGCTAAGAAAGAGCTCGCCGGATCAGACGTTCTCGTCTG
TCCGGTCATTGGATTCCCCACGGCAACAGCACCACCGAGATCAAGGTCCT
CGAAGCCACCGCTGCCGCGAAGGCTGGCGGAGCCGAGATCGACATGGTGG
TCAATGTGGGCAAGGTTCTCGGGGAGGAATGGGACTATGTGGCGGAGGAG
ATTCGCCAGATCAACGATGCTGTGGTTGCCAATGGGGCAATTTTGAAGGT
CATCTTCGAGAATGATTACTTGCGCTCTGAGCATATTGCTCGTCTGTGTG
AGATATGTACCCAGATTGGAGTGGCCTTTGTCAAGACTTCGACTGGATAT
GGATTTGTCAAGCAGCAGGATGGCTCGTATAATTACAAGGGTGCCACGGT
ACAGGCTGTTAAGTTGATGAGGGAGAAGTCTGGCGAGAAGGTGCAAATCA
AAGCTGCCGGTGGAGTTCGCACGTTGGATGATCTGCTACATGTCATGAGT
TTGGGTGTTACTCGCATTGGAGCCACGGCTACTGTGGCAATTTTGGAGGA
TGCCAAGAAGCGTGGGATAGGGAACGAGCCTGTTGAGGTGGCGTTTAAGC
CAATGGCGGAGGCATCTGGAGGCTACTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:3640742..3641520+

>CAN33_55740-T1 ID=CAN33_55740-T1|Name=CAN33_55740-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1458bp|location=Sequence derived from alignment at NKJJ01000020.1:3640742..3641520+ (Aspergillus niger FDAARGOS_311)
ATGGCGCACAAAATCACAGTCACCCTGCCCCAGCTGGCCAAGATGATCGA
CCACTCGCTCCTCCACCCCACCATGACCGACGCCGACATCATAGCCGGCC
TTAAAATTGCCCGCGACAACCACGTCGCAACCGCCTGCGTCAAACCCTAC
GCCATCCCCTTAGCTAAGAAAGAGCTCGCCGGATCAGACGTTCTCGTCCT
CGAAGCCACCGCTGCCGCGAAGGCTGGCGGAGCCGAGATCGACATGGTGG
TCAATGTGGGCAAGGTTCTCGGGGAGGAATGGGACTATGTGGCGGAGGAG
ATTCGCCAGATCAACGATGCTGTGGTTGCCAATGGGGCAATTTTGAAGGT
CATCTTCGAGAATGATTACTTGCGCTCTGAGCATATTGCTCGTCTGTGTG
AGATATGTACCCAGATTGGAGTGGCCTTTGTCAAGACTTCGACTGGATAT
GGATTTGTCAAGCAGCAGGATGGCTCGTATAATTACAAGGGTGCCACGGT
ACAGGCTGTTAAGTTGATGAGGGAGAAGTCTGGCGAGAAGGTGCAAATCA
AAGCTGCCGGTGGAGTTCGCACGTTGGATGATCTGCTACATGTCATGAGT
TTGGGTGTTACTCGCATTGGAGCCACGGCTACTGTGGCAATTTTGGAGGA
TGCCAAGAAGCGTGGGATAGGGAACGAGCCTGTTGAGGTGGCGTTTAAGC
CAATGGCGGAGGCATCTGGAGGCTACTGAATGGCGCACAAAATCACAGTC
ACCCTGCCCCAGCTGGCCAAGATGATCGACCACTCGCTCCTCCACCCCAC
CATGACCGACGCCGACATCATAGCCGGCCTTAAAATTGCCCGCGACAACC
ACGTCGCAACCGCCTGCGTCAAACCCTACGCCATCCCCTTAGCTAAGAAA
GAGCTCGCCGGATCAGACGTTCTCGTCCTCGAAGCCACCGCTGCCGCGAA
GGCTGGCGGAGCCGAGATCGACATGGTGGTCAATGTGGGCAAGGTTCTCG
GGGAGGAATGGGACTATGTGGCGGAGGAGATTCGCCAGATCAACGATGCT
GTGGTTGCCAATGGGGCAATTTTGAAGGTCATCTTCGAGAATGATTACTT
GCGCTCTGAGCATATTGCTCGTCTGTGTGAGATATGTACCCAGATTGGAG
TGGCCTTTGTCAAGACTTCGACTGGATATGGATTTGTCAAGCAGCAGGAT
GGCTCGTATAATTACAAGGGTGCCACGGTACAGGCTGTTAAGTTGATGAG
GGAGAAGTCTGGCGAGAAGGTGCAAATCAAAGCTGCCGGTGGAGTTCGCA
CGTTGGATGATCTGCTACATGTCATGAGTTTGGGTGTTACTCGCATTGGA
GCCACGGCTACTGTGGCAATTTTGGAGGATGCCAAGAAGCGTGGGATAGG
GAACGAGCCTGTTGAGGTGGCGTTTAAGCCAATGGCGGAGGCATCTGGAG
GCTACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0009264deoxyribonucleotide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004139deoxyribose-phosphate aldolase activity
GO:0003824catalytic activity
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55740CAN33_55740Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55740-T1.exon1CAN33_55740-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_55740-T1.exon2CAN33_55740-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55740-T1.cdsCAN33_55740-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55740-T1CAN33_55740-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000201.9
DBxrefInterPro:IPR011343
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR002915
DBxrefPFAM:PF01791
Productdeoxyribose-phosphate aldolase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3640742..3641520 +
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