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CAN33_5580-T1, CAN33_5580-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5580-T1
Unique NameCAN33_5580-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1113986..1115907+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5580-T1 ID=CAN33_5580-T1|Name=CAN33_5580-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1922bp|location=Sequence derived from alignment at NKJJ01000019.1:1113986..1115907+ (Aspergillus niger FDAARGOS_311)
ATGGGCAAGTTTCGCACGCGATGGTACAAGACTGATCGAGCTCAGGATTT
TGAGCATGAGCAGGTAGGGGCGTCTTAGATGCTTGACAAATCCTGAATCT
GCTAGCTAATACTGTGTTGGTGTCATAGGATCGAGATGTTCGCGCTCGGC
AGGTGTACGACACAATCGACCGCCAGGGATTTCAATACTTGATCGTCTTT
GTTGCAGGCGTTGGCTTCTTTCTCGATGGATACACCCTATTTGCAAGCAA
CATGGCACTTCCAATGATCTCCTACGTCTACTGGAAGAAAGAGGTGTCTT
CGATCAAGATTACTTTATTTAACATTGCAACATTAGGCGGGACGCTACTG
GGACAGGTCTTGTTTGGGTACCTGGCTGACCGGAACGGACGTAAGAAGAT
GTATGGCTTGGAGCTGATACTCATGATCACGTCAACACTGGGCGTCGTTA
TGGCCTCCCGCGGGGAGAATGATTCGATGAGCATCTACGCATGGCTCATA
TGGTGGCGTATAGTTGTCGGGATTGGTGTCGGAGCCGACTATCCTTTGAG
TTCAGTCATCACAAGCGAATTTGCCCCCACCAAGCACCGAGCACGAATGA
TGGCTTCGGTGTTCTTCATGCAACCTTTAGGGCAGATCTGGGCAAACCTT
GTGTCGTTGATTGTCATCGCCACCAGCCGTTCAGATACCAATGATTTGAC
CATGTCTGTCGATAGAATGTGGCGCTACGTCATTGGTATCGGTGTGATTC
CGGCAGCAATAGCAACTTGCTTCCGGTTCTTCGTTCCGGAGTCGCCACGC
TTCCTCATGGAGATCGACGATGACCCAGTGAAAGTCGAGTTCGATGCAAC
CGCACTCTTTACCGAACCAAATGCTGTTTCCTCCTCCCCGACTCTCGAAA
CCGAAAGCTGGCACAATTTCCCGGGGCAAGCATATTCCCTGACTACGATC
ACGGCGGAAGACCGATCCTCCACATCCCAGACCGGCATCCTTCAACCAGC
GACTTTAAACTCTCACTGGCGCTTAACGTGGAAGGACATCGTACAATACT
TCTGGGTGGAAGGTAATTGGCGAACTCTAGCTGGGACAGCTATGTCCTGG
TTCTTCTTAGACTTTGGTTTCTATGGTATCAGTCTCTCCAGCCCGCAATT
TTTGGCCAAAACCTGGGGATCCATTCATTTGAGCGCGCCTGCGCCTTACT
GGGAGACGAACGACAGTCCTGGTGCAAGCGTCTATGACATGTTCTTCGCA
AGTTGCACTCACGCGCTGGTCATCTTGAATGTGGGTAGCTTTGCCGGCGG
GCTTCTCCTCATCTTAGTGATCCACAAACTGGACAGAGTCGCTCTACAAA
AATACTCTTTTCTCGCACTCTCCGCACTCTTCATCGCCCTGGGTTGCATG
CTTATCACCATACAAAAAGAAGGTCCTGTGGCCGTTGTCTTGTACGTCAT
TGGCCAGGCGCTCTTCAACTTTGGTATGTAACCGGCCTCTACCATAGGGT
TCTCCTGGAAGTCGCTAACCAACCTTTATATAGGACCCAACGCTACAACG
TACATCATCCCGGCTGAAATATTCCCCACCCGCTACCGTGCTACCTGTCA
CGGACTTAGCGCCGGCGCTGGCAAGATCGGCTCTATAGTGGTTCAGGTCT
TTTCCGCCTACTACAACTTCGGTGGTGGTTTCGGAGAGGAACCGGTAAAG
CGGCACGGCTACATTATGATCGTCTTTGCTGGATGCATGCTCTTTGGGGC
GATAGTAACATGCTGGATACCACCTATCCAAAGAAAGCCTGATGGATCCG
GTAGAGGCAAACTGTGGGGAGGCAAGACGGAGACGCTGGAGACTTTGGCT
CTTGGTCGACTCGGCTTGGACAGTCGATATGCGAATCAGGGCAGAAGGCG
AAGGAGGGACGTTGTTACATGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1113986..1115907+

>CAN33_5580-T1 ID=CAN33_5580-T1|Name=CAN33_5580-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5391bp|location=Sequence derived from alignment at NKJJ01000019.1:1113986..1115907+ (Aspergillus niger FDAARGOS_311)
ATGGGCAAGTTTCGCACGCGATGGTACAAGACTGATCGAGCTCAGGATTT
TGAGCATGAGCAGGATCGAGATGTTCGCGCTCGGCAGGTGTACGACACAA
TCGACCGCCAGGGATTTCAATACTTGATCGTCTTTGTTGCAGGCGTTGGC
TTCTTTCTCGATGGATACACCCTATTTGCAAGCAACATGGCACTTCCAAT
GATCTCCTACGTCTACTGGAAGAAAGAGGTGTCTTCGATCAAGATTACTT
TATTTAACATTGCAACATTAGGCGGGACGCTACTGGGACAGGTCTTGTTT
GGGTACCTGGCTGACCGGAACGGACGTAAGAAGATGTATGGCTTGGAGCT
GATACTCATGATCACGTCAACACTGGGCGTCGTTATGGCCTCCCGCGGGG
AGAATGATTCGATGAGCATCTACGCATGGCTCATATGGTGGCGTATAGTT
GTCGGGATTGGTGTCGGAGCCGACTATCCTTTGAGTTCAGTCATCACAAG
CGAATTTGCCCCCACCAAGCACCGAGCACGAATGATGGCTTCGGTGTTCT
TCATGCAACCTTTAGGGCAGATCTGGGCAAACCTTGTGTCGTTGATTGTC
ATCGCCACCAGCCGTTCAGATACCAATGATTTGACCATGTCTGTCGATAG
AATGTGGCGCTACGTCATTGGTATCGGTGTGATTCCGGCAGCAATAGCAA
CTTGCTTCCGGTTCTTCGTTCCGGAGTCGCCACGCTTCCTCATGGAGATC
GACGATGACCCAGTGAAAGTCGAGTTCGATGCAACCGCACTCTTTACCGA
ACCAAATGCTGTTTCCTCCTCCCCGACTCTCGAAACCGAAAGCTGGCACA
ATTTCCCGGGGCAAGCATATTCCCTGACTACGATCACGGCGGAAGACCGA
TCCTCCACATCCCAGACCGGCATCCTTCAACCAGCGACTTTAAACTCTCA
CTGGCGCTTAACGTGGAAGGACATCGTACAATACTTCTGGGTGGAAGGTA
ATTGGCGAACTCTAGCTGGGACAGCTATGTCCTGGTTCTTCTTAGACTTT
GGTTTCTATGGTATCAGTCTCTCCAGCCCGCAATTTTTGGCCAAAACCTG
GGGATCCATTCATTTGAGCGCGCCTGCGCCTTACTGGGAGACGAACGACA
GTCCTGGTGCAAGCGTCTATGACATGTTCTTCGCAAGTTGCACTCACGCG
CTGGTCATCTTGAATGTGGGTAGCTTTGCCGGCGGGCTTCTCCTCATCTT
AGTGATCCACAAACTGGACAGAGTCGCTCTACAAAAATACTCTTTTCTCG
CACTCTCCGCACTCTTCATCGCCCTGGGTTGCATGCTTATCACCATACAA
AAAGAAGGTCCTGTGGCCGTTGTCTTGTACGTCATTGGCCAGGCGCTCTT
CAACTTTGGACCCAACGCTACAACGTACATCATCCCGGCTGAAATATTCC
CCACCCGCTACCGTGCTACCTGTCACGGACTTAGCGCCGGCGCTGGCAAG
ATCGGCTCTATAGTGGTTCAGGTCTTTTCCGCCTACTACAACTTCGGTGG
TGGTTTCGGAGAGGAACCGGTAAAGCGGCACGGCTACATTATGATCGTCT
TTGCTGGATGCATGCTCTTTGGGGCGATAGTAACATGCTGGATACCACCT
ATCCAAAGAAAGCCTGATGGATCCGGTAGAGGCAAACTGTGGGGAGGCAA
GACGGAGACGCTGGAGACTTTGGCTCTTGGTCGACTCGGCTTGGACAGTC
GATATGCGAATCAGGGCAGAAGGCGAAGGAGGGACGTTGTTACATGAATG
GGCAAGTTTCGCACGCGATGGTACAAGACTGATCGAGCTCAGGATTTTGA
GCATGAGCAGGATCGAGATGTTCGCGCTCGGCAGGTGTACGACACAATCG
ACCGCCAGGGATTTCAATACTTGATCGTCTTTGTTGCAGGCGTTGGCTTC
TTTCTCGATGGATACACCCTATTTGCAAGCAACATGGCACTTCCAATGAT
CTCCTACGTCTACTGGAAGAAAGAGGTGTCTTCGATCAAGATTACTTTAT
TTAACATTGCAACATTAGGCGGGACGCTACTGGGACAGGTCTTGTTTGGG
TACCTGGCTGACCGGAACGGACGTAAGAAGATGTATGGCTTGGAGCTGAT
ACTCATGATCACGTCAACACTGGGCGTCGTTATGGCCTCCCGCGGGGAGA
ATGATTCGATGAGCATCTACGCATGGCTCATATGGTGGCGTATAGTTGTC
GGGATTGGTGTCGGAGCCGACTATCCTTTGAGTTCAGTCATCACAAGCGA
ATTTGCCCCCACCAAGCACCGAGCACGAATGATGGCTTCGGTGTTCTTCA
TGCAACCTTTAGGGCAGATCTGGGCAAACCTTGTGTCGTTGATTGTCATC
GCCACCAGCCGTTCAGATACCAATGATTTGACCATGTCTGTCGATAGAAT
GTGGCGCTACGTCATTGGTATCGGTGTGATTCCGGCAGCAATAGCAACTT
GCTTCCGGTTCTTCGTTCCGGAGTCGCCACGCTTCCTCATGGAGATCGAC
GATGACCCAGTGAAAGTCGAGTTCGATGCAACCGCACTCTTTACCGAACC
AAATGCTGTTTCCTCCTCCCCGACTCTCGAAACCGAAAGCTGGCACAATT
TCCCGGGGCAAGCATATTCCCTGACTACGATCACGGCGGAAGACCGATCC
TCCACATCCCAGACCGGCATCCTTCAACCAGCGACTTTAAACTCTCACTG
GCGCTTAACGTGGAAGGACATCGTACAATACTTCTGGGTGGAAGGTAATT
GGCGAACTCTAGCTGGGACAGCTATGTCCTGGTTCTTCTTAGACTTTGGT
TTCTATGGTATCAGTCTCTCCAGCCCGCAATTTTTGGCCAAAACCTGGGG
ATCCATTCATTTGAGCGCGCCTGCGCCTTACTGGGAGACGAACGACAGTC
CTGGTGCAAGCGTCTATGACATGTTCTTCGCAAGTTGCACTCACGCGCTG
GTCATCTTGAATGTGGGTAGCTTTGCCGGCGGGCTTCTCCTCATCTTAGT
GATCCACAAACTGGACAGAGTCGCTCTACAAAAATACTCTTTTCTCGCAC
TCTCCGCACTCTTCATCGCCCTGGGTTGCATGCTTATCACCATACAAAAA
GAAGGTCCTGTGGCCGTTGTCTTGTACGTCATTGGCCAGGCGCTCTTCAA
CTTTGGACCCAACGCTACAACGTACATCATCCCGGCTGAAATATTCCCCA
CCCGCTACCGTGCTACCTGTCACGGACTTAGCGCCGGCGCTGGCAAGATC
GGCTCTATAGTGGTTCAGGTCTTTTCCGCCTACTACAACTTCGGTGGTGG
TTTCGGAGAGGAACCGGTAAAGCGGCACGGCTACATTATGATCGTCTTTG
CTGGATGCATGCTCTTTGGGGCGATAGTAACATGCTGGATACCACCTATC
CAAAGAAAGCCTGATGGATCCGGTAGAGGCAAACTGTGGGGAGGCAAGAC
GGAGACGCTGGAGACTTTGGCTCTTGGTCGACTCGGCTTGGACAGTCGAT
ATGCGAATCAGGGCAGAAGGCGAAGGAGGGACGTTGTTACATGAATGGGC
AAGTTTCGCACGCGATGGTACAAGACTGATCGAGCTCAGGATTTTGAGCA
TGAGCAGGATCGAGATGTTCGCGCTCGGCAGGTGTACGACACAATCGACC
GCCAGGGATTTCAATACTTGATCGTCTTTGTTGCAGGCGTTGGCTTCTTT
CTCGATGGATACACCCTATTTGCAAGCAACATGGCACTTCCAATGATCTC
CTACGTCTACTGGAAGAAAGAGGTGTCTTCGATCAAGATTACTTTATTTA
ACATTGCAACATTAGGCGGGACGCTACTGGGACAGGTCTTGTTTGGGTAC
CTGGCTGACCGGAACGGACGTAAGAAGATGTATGGCTTGGAGCTGATACT
CATGATCACGTCAACACTGGGCGTCGTTATGGCCTCCCGCGGGGAGAATG
ATTCGATGAGCATCTACGCATGGCTCATATGGTGGCGTATAGTTGTCGGG
ATTGGTGTCGGAGCCGACTATCCTTTGAGTTCAGTCATCACAAGCGAATT
TGCCCCCACCAAGCACCGAGCACGAATGATGGCTTCGGTGTTCTTCATGC
AACCTTTAGGGCAGATCTGGGCAAACCTTGTGTCGTTGATTGTCATCGCC
ACCAGCCGTTCAGATACCAATGATTTGACCATGTCTGTCGATAGAATGTG
GCGCTACGTCATTGGTATCGGTGTGATTCCGGCAGCAATAGCAACTTGCT
TCCGGTTCTTCGTTCCGGAGTCGCCACGCTTCCTCATGGAGATCGACGAT
GACCCAGTGAAAGTCGAGTTCGATGCAACCGCACTCTTTACCGAACCAAA
TGCTGTTTCCTCCTCCCCGACTCTCGAAACCGAAAGCTGGCACAATTTCC
CGGGGCAAGCATATTCCCTGACTACGATCACGGCGGAAGACCGATCCTCC
ACATCCCAGACCGGCATCCTTCAACCAGCGACTTTAAACTCTCACTGGCG
CTTAACGTGGAAGGACATCGTACAATACTTCTGGGTGGAAGGTAATTGGC
GAACTCTAGCTGGGACAGCTATGTCCTGGTTCTTCTTAGACTTTGGTTTC
TATGGTATCAGTCTCTCCAGCCCGCAATTTTTGGCCAAAACCTGGGGATC
CATTCATTTGAGCGCGCCTGCGCCTTACTGGGAGACGAACGACAGTCCTG
GTGCAAGCGTCTATGACATGTTCTTCGCAAGTTGCACTCACGCGCTGGTC
ATCTTGAATGTGGGTAGCTTTGCCGGCGGGCTTCTCCTCATCTTAGTGAT
CCACAAACTGGACAGAGTCGCTCTACAAAAATACTCTTTTCTCGCACTCT
CCGCACTCTTCATCGCCCTGGGTTGCATGCTTATCACCATACAAAAAGAA
GGTCCTGTGGCCGTTGTCTTGTACGTCATTGGCCAGGCGCTCTTCAACTT
TGGACCCAACGCTACAACGTACATCATCCCGGCTGAAATATTCCCCACCC
GCTACCGTGCTACCTGTCACGGACTTAGCGCCGGCGCTGGCAAGATCGGC
TCTATAGTGGTTCAGGTCTTTTCCGCCTACTACAACTTCGGTGGTGGTTT
CGGAGAGGAACCGGTAAAGCGGCACGGCTACATTATGATCGTCTTTGCTG
GATGCATGCTCTTTGGGGCGATAGTAACATGCTGGATACCACCTATCCAA
AGAAAGCCTGATGGATCCGGTAGAGGCAAACTGTGGGGAGGCAAGACGGA
GACGCTGGAGACTTTGGCTCTTGGTCGACTCGGCTTGGACAGTCGATATG
CGAATCAGGGCAGAAGGCGAAGGAGGGACGTTGTTACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_5580CAN33_5580Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5580-T1.exon1CAN33_5580-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_5580-T1.exon2CAN33_5580-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_5580-T1.exon3CAN33_5580-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5580-T1.cdsCAN33_5580-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5580-T1CAN33_5580-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefPFAM:PF07690
ProductSugar (and other) transporter family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1113986..1115907 +
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