You are here

Home

CAN33_55805-T1, CAN33_55805-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55805-T1
Unique NameCAN33_55805-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3674228..3675036+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55805-T1 ID=CAN33_55805-T1|Name=CAN33_55805-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=809bp|location=Sequence derived from alignment at NKJJ01000020.1:3674228..3675036+ (Aspergillus niger FDAARGOS_311)
ATGATGAACCGTACGCTCCTTCTCGGTCTGGCTGCTGCCGGCCTGGTCTC
AGCAAAGGCCACTGTCACCTCCATGTTCATCTACGACACCGATCCACAGC
CTTTGGCAGCGTCCATCATAGGCAATGCAAGTCGTCCTTGTCTTTATCAG
CCTGGTATACCCCCCTCAACTAACCGTGATGCAGGATGCGACCGCGACAA
CCTACAGTATCAACTGCCCACCCGGCACCGATTCCAGTGATTGTGGCATG
GGTCCCGGTCTTACCCTGATCGCCGGTCCCAAAACCACCATGATCCTGGA
TGCTCCGGATTTAGATTTGTGAGTTGGTTGTTGTCTACAACCTATGCATG
GGTGATTACTAACATGGTTTGCTGCATAGCTACTACACCTGCGTCTGCTC
TGTCGATGGAACGACGCACGCCGTCTGTACCGAAACAGCCTCGGGATCCG
GCGCCAACTTCCCAGGAACCAGCAGCTCCACCCTGGATGGTGATCTGGAT
TTGATGCCTGTGACTATCACGGCGGGCTCTGTCACGAGCGTGGCTGCCTC
CGCCGCCCACGCTACAACTGAGGCTCAGACAGCAAGTAGCACGGGTTCCG
CTGCTACTGCTACTGGGAAACAGTCGCAGGCATCTGCCGCCTCTACTAGT
GCTGCCACGGCTGGCTCTGTCACCTCTTCCAAGACTGCGACTGCCTCGAA
TGTCAATGCTTCTGCTACGGGCACCGGTAAGGCCTCTCTGGCCAAGAGTG
ATGCGGGCCTCGTCTTCGGAGGAGCTGCTGCTGCGGCTTTCATCGCTGCT
GTTCTCTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:3674228..3675036+

>CAN33_55805-T1 ID=CAN33_55805-T1|Name=CAN33_55805-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1953bp|location=Sequence derived from alignment at NKJJ01000020.1:3674228..3675036+ (Aspergillus niger FDAARGOS_311)
ATGATGAACCGTACGCTCCTTCTCGGTCTGGCTGCTGCCGGCCTGGTCTC
AGCAAAGGCCACTGTCACCTCCATGTTCATCTACGACACCGATCCACAGC
CTTTGGCAGCTATCAACTGCCCACCCGGCACCGATTCCAGTGATTGTGGC
ATGGGTCCCGGTCTTACCCTGATCGCCGGTCCCAAAACCACCATGATCCT
GGATGCTCCGGATTTAGATTTCTACTACACCTGCGTCTGCTCTGTCGATG
GAACGACGCACGCCGTCTGTACCGAAACAGCCTCGGGATCCGGCGCCAAC
TTCCCAGGAACCAGCAGCTCCACCCTGGATGGTGATCTGGATTTGATGCC
TGTGACTATCACGGCGGGCTCTGTCACGAGCGTGGCTGCCTCCGCCGCCC
ACGCTACAACTGAGGCTCAGACAGCAAGTAGCACGGGTTCCGCTGCTACT
GCTACTGGGAAACAGTCGCAGGCATCTGCCGCCTCTACTAGTGCTGCCAC
GGCTGGCTCTGTCACCTCTTCCAAGACTGCGACTGCCTCGAATGTCAATG
CTTCTGCTACGGGCACCGGTAAGGCCTCTCTGGCCAAGAGTGATGCGGGC
CTCGTCTTCGGAGGAGCTGCTGCTGCGGCTTTCATCGCTGCTGTTCTCTA
AATGATGAACCGTACGCTCCTTCTCGGTCTGGCTGCTGCCGGCCTGGTCT
CAGCAAAGGCCACTGTCACCTCCATGTTCATCTACGACACCGATCCACAG
CCTTTGGCAGCTATCAACTGCCCACCCGGCACCGATTCCAGTGATTGTGG
CATGGGTCCCGGTCTTACCCTGATCGCCGGTCCCAAAACCACCATGATCC
TGGATGCTCCGGATTTAGATTTCTACTACACCTGCGTCTGCTCTGTCGAT
GGAACGACGCACGCCGTCTGTACCGAAACAGCCTCGGGATCCGGCGCCAA
CTTCCCAGGAACCAGCAGCTCCACCCTGGATGGTGATCTGGATTTGATGC
CTGTGACTATCACGGCGGGCTCTGTCACGAGCGTGGCTGCCTCCGCCGCC
CACGCTACAACTGAGGCTCAGACAGCAAGTAGCACGGGTTCCGCTGCTAC
TGCTACTGGGAAACAGTCGCAGGCATCTGCCGCCTCTACTAGTGCTGCCA
CGGCTGGCTCTGTCACCTCTTCCAAGACTGCGACTGCCTCGAATGTCAAT
GCTTCTGCTACGGGCACCGGTAAGGCCTCTCTGGCCAAGAGTGATGCGGG
CCTCGTCTTCGGAGGAGCTGCTGCTGCGGCTTTCATCGCTGCTGTTCTCT
AAATGATGAACCGTACGCTCCTTCTCGGTCTGGCTGCTGCCGGCCTGGTC
TCAGCAAAGGCCACTGTCACCTCCATGTTCATCTACGACACCGATCCACA
GCCTTTGGCAGCTATCAACTGCCCACCCGGCACCGATTCCAGTGATTGTG
GCATGGGTCCCGGTCTTACCCTGATCGCCGGTCCCAAAACCACCATGATC
CTGGATGCTCCGGATTTAGATTTCTACTACACCTGCGTCTGCTCTGTCGA
TGGAACGACGCACGCCGTCTGTACCGAAACAGCCTCGGGATCCGGCGCCA
ACTTCCCAGGAACCAGCAGCTCCACCCTGGATGGTGATCTGGATTTGATG
CCTGTGACTATCACGGCGGGCTCTGTCACGAGCGTGGCTGCCTCCGCCGC
CCACGCTACAACTGAGGCTCAGACAGCAAGTAGCACGGGTTCCGCTGCTA
CTGCTACTGGGAAACAGTCGCAGGCATCTGCCGCCTCTACTAGTGCTGCC
ACGGCTGGCTCTGTCACCTCTTCCAAGACTGCGACTGCCTCGAATGTCAA
TGCTTCTGCTACGGGCACCGGTAAGGCCTCTCTGGCCAAGAGTGATGCGG
GCCTCGTCTTCGGAGGAGCTGCTGCTGCGGCTTTCATCGCTGCTGTTCTC
TAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55805CAN33_55805Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55805-T1.exon1CAN33_55805-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_55805-T1.exon2CAN33_55805-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55805-T1.exon3CAN33_55805-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55805-T1.cdsCAN33_55805-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55805-T1CAN33_55805-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3674228..3675036 +
Powered by Drupal