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CAN33_55825-T1, CAN33_55825-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55825-T1
Unique NameCAN33_55825-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3684100..3684675+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55825-T1 ID=CAN33_55825-T1|Name=CAN33_55825-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=576bp|location=Sequence derived from alignment at NKJJ01000020.1:3684100..3684675+ (Aspergillus niger FDAARGOS_311)
ATGTCGCCCTCCCTCCATCCTCTCCTCGACAACGGCATCACCAAAGGGGA
CCCTAACTTCCCTGGCGGTAACCTCTACTGCAAATGCTCCTCCGACAAGG
TGGTGGTTAAGCTGGCCAGCAATGTCGCTCACAATCACGCCTGTGGCTGC
TCTAAGTGCTGGAAGCCCGCCGGATCGTTGTTTTCCATCGTCGGAGTAGT
TCCCCGCGACGCCGTCTCCGTCACCGAACACGCAGAGAAGTTGTCCATCG
TGGACGCGTCCGCCGCTATCCAGAGATACGCCTGCAAGGGCTGCGGGGTA
CACATGTTCGGTCGCATCGAGAAAGACCACCCTTTCAAGGGCCTGGACTT
TGTGCACGCCGAGCTGTCCGACCAGAAGGGCTGGCAGGAGCCTCAGTTCG
CGGGATTCGTCTCCTCCATCATCGAGCAGGGCTTCCACCCCAAGGGCATG
GAGGAAGTGCGCTCCAAGTTCCACTCCCTGGGTCTCGAGACATACGACGC
GCTGTCGCCGGCATTGATGGATCTGATTGCCACCTTCACGGCTCAAAGGG
CGGGGGTGTTGTCTGCGAACCTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:3684100..3684675+

>CAN33_55825-T1 ID=CAN33_55825-T1|Name=CAN33_55825-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=576bp|location=Sequence derived from alignment at NKJJ01000020.1:3684100..3684675+ (Aspergillus niger FDAARGOS_311)
ATGTCGCCCTCCCTCCATCCTCTCCTCGACAACGGCATCACCAAAGGGGA
CCCTAACTTCCCTGGCGGTAACCTCTACTGCAAATGCTCCTCCGACAAGG
TGGTGGTTAAGCTGGCCAGCAATGTCGCTCACAATCACGCCTGTGGCTGC
TCTAAGTGCTGGAAGCCCGCCGGATCGTTGTTTTCCATCGTCGGAGTAGT
TCCCCGCGACGCCGTCTCCGTCACCGAACACGCAGAGAAGTTGTCCATCG
TGGACGCGTCCGCCGCTATCCAGAGATACGCCTGCAAGGGCTGCGGGGTA
CACATGTTCGGTCGCATCGAGAAAGACCACCCTTTCAAGGGCCTGGACTT
TGTGCACGCCGAGCTGTCCGACCAGAAGGGCTGGCAGGAGCCTCAGTTCG
CGGGATTCGTCTCCTCCATCATCGAGCAGGGCTTCCACCCCAAGGGCATG
GAGGAAGTGCGCTCCAAGTTCCACTCCCTGGGTCTCGAGACATACGACGC
GCTGTCGCCGGCATTGATGGATCTGATTGCCACCTTCACGGCTCAAAGGG
CGGGGGTGTTGTCTGCGAACCTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0046294formaldehyde catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0051907S-(hydroxymethyl)glutathione synthase activity
GO:0008270zinc ion binding
GO:0016846carbon-sulfur lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55825CAN33_55825Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55825-T1.exon1CAN33_55825-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55825-T1.cdsCAN33_55825-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55825-T1CAN33_55825-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011057
DBxrefInterPro:IPR014185
DBxrefInterPro:IPR006913
DBxrefPFAM:PF04828
ProductS-(hydroxymethyl)glutathione synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3684100..3684675 +
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