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CAN33_55875-T1, CAN33_55875-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55875-T1
Unique NameCAN33_55875-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3701764..3702733+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55875-T1 ID=CAN33_55875-T1|Name=CAN33_55875-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=970bp|location=Sequence derived from alignment at NKJJ01000020.1:3701764..3702733+ (Aspergillus niger FDAARGOS_311)
ATGATCTCTTCTATTACTTCTCCCGTTGTCTCTCCAACTGGCAAGACGCG
ACTGCAGGCCTCACTCGAGCGTGCGACCGCGCGGCAAGGGCCATCTATCG
GACAGTGGCTGGAATTTCCGGGCTATTCGTTGGCACGCACCGTGGCGCAT
CTTGGGGCAGATGTACGTGCAGCCAGCCTCACTTTATACTTTTTTTGCTA
CAGCTCTGATATACTAGTAGTGGGTATTGCTTGACTGTGAGCATGGGAAC
ATCGATGACAAGGCTATGTACCTGCAGGTCGGGGCCATATCCTCGGCTGG
GGTATCGCCCATCGTGCGGATTCCGGCCTCGGAGCCCTGGATGATGAAGC
GCGCCCTGGACTGCGGTGCCCACGCAATCATGGTGCCCATGTGTGAGACC
AAGGTTCGTCAAAGGCCCGTATTTCGTGACTGCTCTTCCTTTCTCGTCTA
ATCATCGTGCCAGGAACAAGCTGAGGCTATTGTACGAGGGTGCAAATACC
CCTCATTCCAGTGGCCGCAGGGAATGCGGGGTGCAGGTGCCATGTTTGCC
CCCGCTGCTTTCAATCAGACCGGCCGAGAGTACCTTACGCACGCTAATGA
TAATGTGATGATCATCGTGCAGATTGAATCCCGCACGGCGGTTGAAAATT
GTGCTGCCATTGCAGCAGTTCCAGGCATCGACATGCTCTTTGTCGGGCCC
AATGACCTGGCCTCATCCATGGGGTACTTTGCCTTGGACCACGCAAAGAT
TCCCGAAGTACAGGAGGCGACAACGCATGTCCTACAAGTTGCCAAGGATG
CGGGGAAATATGCCGGTCATTTTGCCCTGTCAGCAGATGTGGCCGCGGCC
AAGTACCATCAGGGTTTTGACTTTGTCAACTTCGGAGCCGACATTGTCGC
CCTGACCTCATGGATGACGGCAGAGATGACCAGGTTGCGTCAACTCACTG
ACGCTAGCGCAGTAAATTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:3701764..3702733+

>CAN33_55875-T1 ID=CAN33_55875-T1|Name=CAN33_55875-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2556bp|location=Sequence derived from alignment at NKJJ01000020.1:3701764..3702733+ (Aspergillus niger FDAARGOS_311)
ATGATCTCTTCTATTACTTCTCCCGTTGTCTCTCCAACTGGCAAGACGCG
ACTGCAGGCCTCACTCGAGCGTGCGACCGCGCGGCAAGGGCCATCTATCG
GACAGTGGCTGGAATTTCCGGGCTATTCGTTGGCACGCACCGTGGCGCAT
CTTGGGGCAGATTGGGTATTGCTTGACTGTGAGCATGGGAACATCGATGA
CAAGGCTATGTACCTGCAGGTCGGGGCCATATCCTCGGCTGGGGTATCGC
CCATCGTGCGGATTCCGGCCTCGGAGCCCTGGATGATGAAGCGCGCCCTG
GACTGCGGTGCCCACGCAATCATGGTGCCCATGTGTGAGACCAAGGAACA
AGCTGAGGCTATTGTACGAGGGTGCAAATACCCCTCATTCCAGTGGCCGC
AGGGAATGCGGGGTGCAGGTGCCATGTTTGCCCCCGCTGCTTTCAATCAG
ACCGGCCGAGAGTACCTTACGCACGCTAATGATAATGTGATGATCATCGT
GCAGATTGAATCCCGCACGGCGGTTGAAAATTGTGCTGCCATTGCAGCAG
TTCCAGGCATCGACATGCTCTTTGTCGGGCCCAATGACCTGGCCTCATCC
ATGGGGTACTTTGCCTTGGACCACGCAAAGATTCCCGAAGTACAGGAGGC
GACAACGCATGTCCTACAAGTTGCCAAGGATGCGGGGAAATATGCCGGTC
ATTTTGCCCTGTCAGCAGATGTGGCCGCGGCCAAGTACCATCAGGGTTTT
GACTTTGTCAACTTCGGAGCCGACATTGTCGCCCTGACCTCATGGATGAC
GGCAGAGATGACCAGGTTGCGTCAACTCACTGACGCTAGCGCAGTAAATT
AAATGATCTCTTCTATTACTTCTCCCGTTGTCTCTCCAACTGGCAAGACG
CGACTGCAGGCCTCACTCGAGCGTGCGACCGCGCGGCAAGGGCCATCTAT
CGGACAGTGGCTGGAATTTCCGGGCTATTCGTTGGCACGCACCGTGGCGC
ATCTTGGGGCAGATTGGGTATTGCTTGACTGTGAGCATGGGAACATCGAT
GACAAGGCTATGTACCTGCAGGTCGGGGCCATATCCTCGGCTGGGGTATC
GCCCATCGTGCGGATTCCGGCCTCGGAGCCCTGGATGATGAAGCGCGCCC
TGGACTGCGGTGCCCACGCAATCATGGTGCCCATGTGTGAGACCAAGGAA
CAAGCTGAGGCTATTGTACGAGGGTGCAAATACCCCTCATTCCAGTGGCC
GCAGGGAATGCGGGGTGCAGGTGCCATGTTTGCCCCCGCTGCTTTCAATC
AGACCGGCCGAGAGTACCTTACGCACGCTAATGATAATGTGATGATCATC
GTGCAGATTGAATCCCGCACGGCGGTTGAAAATTGTGCTGCCATTGCAGC
AGTTCCAGGCATCGACATGCTCTTTGTCGGGCCCAATGACCTGGCCTCAT
CCATGGGGTACTTTGCCTTGGACCACGCAAAGATTCCCGAAGTACAGGAG
GCGACAACGCATGTCCTACAAGTTGCCAAGGATGCGGGGAAATATGCCGG
TCATTTTGCCCTGTCAGCAGATGTGGCCGCGGCCAAGTACCATCAGGGTT
TTGACTTTGTCAACTTCGGAGCCGACATTGTCGCCCTGACCTCATGGATG
ACGGCAGAGATGACCAGGTTGCGTCAACTCACTGACGCTAGCGCAGTAAA
TTAAATGATCTCTTCTATTACTTCTCCCGTTGTCTCTCCAACTGGCAAGA
CGCGACTGCAGGCCTCACTCGAGCGTGCGACCGCGCGGCAAGGGCCATCT
ATCGGACAGTGGCTGGAATTTCCGGGCTATTCGTTGGCACGCACCGTGGC
GCATCTTGGGGCAGATTGGGTATTGCTTGACTGTGAGCATGGGAACATCG
ATGACAAGGCTATGTACCTGCAGGTCGGGGCCATATCCTCGGCTGGGGTA
TCGCCCATCGTGCGGATTCCGGCCTCGGAGCCCTGGATGATGAAGCGCGC
CCTGGACTGCGGTGCCCACGCAATCATGGTGCCCATGTGTGAGACCAAGG
AACAAGCTGAGGCTATTGTACGAGGGTGCAAATACCCCTCATTCCAGTGG
CCGCAGGGAATGCGGGGTGCAGGTGCCATGTTTGCCCCCGCTGCTTTCAA
TCAGACCGGCCGAGAGTACCTTACGCACGCTAATGATAATGTGATGATCA
TCGTGCAGATTGAATCCCGCACGGCGGTTGAAAATTGTGCTGCCATTGCA
GCAGTTCCAGGCATCGACATGCTCTTTGTCGGGCCCAATGACCTGGCCTC
ATCCATGGGGTACTTTGCCTTGGACCACGCAAAGATTCCCGAAGTACAGG
AGGCGACAACGCATGTCCTACAAGTTGCCAAGGATGCGGGGAAATATGCC
GGTCATTTTGCCCTGTCAGCAGATGTGGCCGCGGCCAAGTACCATCAGGG
TTTTGACTTTGTCAACTTCGGAGCCGACATTGTCGCCCTGACCTCATGGA
TGACGGCAGAGATGACCAGGTTGCGTCAACTCACTGACGCTAGCGCAGTA
AATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55875CAN33_55875Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55875-T1.exon1CAN33_55875-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_55875-T1.exon2CAN33_55875-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55875-T1.exon3CAN33_55875-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55875-T1.cdsCAN33_55875-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55875-T1CAN33_55875-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015813
DBxrefInterPro:IPR005000
DBxrefInterPro:IPR040442
DBxrefPFAM:PF03328
ProductHpcH/HpaI aldolase/citrate lyase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3701764..3702733 +
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