You are here

Home

CAN33_55910-T1, CAN33_55910-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55910-T1
Unique NameCAN33_55910-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3725169..3727520-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55910-T1 ID=CAN33_55910-T1|Name=CAN33_55910-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2352bp|location=Sequence derived from alignment at NKJJ01000020.1:3725169..3727520- (Aspergillus niger FDAARGOS_311)
ATGGGCTCATCATTATCCTCGGTTTCCAATTCTTCTACCGAAGACATTGT
CATAGTAGGCGCTGGCGCCAGTGGCATAGCAGTGCTTCTTCGCTTGATCG
AACATGCTAAGGATGGCAAGAAGATTCCTCCCATCATCGTCGTTGAGAAA
GCTTCACCTCCTGGTCCAGGACTGGCATATTCTGCCGCTTGTACCGGGAC
CATCCTGAACATGCACACGGACACAATGGGTCTATATTATAACGACCCCA
AGCATTTTACGAGATGGAGAAGCGAGCTAGCCAGTGGTCCCTTCCCGTCC
CGAAGCCAATATGGAGAGTACCTGGAGGCGATGTGGTCCGAGATACTCTC
GCAAGCCCAACAGATGGGCTTGGACATCTCAATCATCCAAGACGAAGTAT
CCGACATTGACCGTCATGACGACAGTACCTTCACCTTGACACTGACAGGG
GGGCGTCGCCTTGCTGCCCAATCTGTCGTGTTGGCGCTGGGGAATTACAC
CTCCACTCTCAACACGCACCTGCTGAATCAACCGGGCTTCTTTCCCAGCC
CGTGGCCAACCTCTCAACTAAAGACCATTCCCGCCGATGCCTCGGTCCTC
ATCATCGGATCAAGGCTCTCCGCTGTTGACGCAGCGCTATTTCTCTCCAA
GAATGGCCACAAGGGCCCGTTGACCTTCATGTCGCGCAGTGGCCGCCTTC
CCAAAGTCCAGGGCGAGCCTGAGCCCTACCCGCGCCGTTACACCCTTCAC
ACCTTGGCCCGATACATCGAATCCAACCCAGCGGACGGTCTTGTCAAGCT
CACAACCACCCTTATGGATGAAATTGACGGAGTGAACAACGGAGATTGGA
CCTGGATACAGAAGCATGCCTCGCCGCTCGCTGAACTACGGGCAGACCTA
TTCGCGGCACAGGGAGGAAATGTCCATTGGCAAACCGTCCTCCGCCACAC
GGCCCCAGTAATCGAGCGTTACTGGCACTGTTTGCCTCTAGAAAGCCAGA
AGCTATTCATGGCCAAATTCTTCACTCCTTGGATGCGATATCGTCACGGA
ATGCCGGTGCAGAATGCGCAAAAGATACTCAACCTGATGGAAACCTCCCA
ACTTAGTGTCGTCGCAGGAGAGGCTGTCCACTGGGATGAGGGTGAGGGCG
CCTTCATCGCCCAGACTACCAGCGGGCCCATAGAAGCATCCTATGTCATC
GAAGCAACTGGACAAGAGAGTCATCTCGATCGCATCCCATCTCCGCTCGT
CCAGTCCGCTGTCCGAAAAGGATTATTCACCCCACACCCGATGGGTGGGG
TTGACGTCGACTTCCACACCCTCTGTACATCAACACCCGGCCTATACACT
ATGGGCTCGTTGACCCGCGGCACGCACTTCTACGTCAGCGCCATCGATCG
AACGGCTGCCCATGCGGCTCGCATCGCCGACGCACTGGTCGGGGAGCCCC
CTGCCAGACCTGTACATATCGCGATCTTTCTCGGTGCAGACGTGGCCTCG
CACCTGATAGCCAGTGACCTGGTCCCCCTGCTTCTGGCCGAGGGCCATAT
GCCTTTCCTCTTTTTGTCATCCAGCAAGCAGACACCTTCCTTAGAGGGGT
CTGATAGTCGACCTTTCGACCTGCGCAAACTGGAATTTTTCGAACGCGAG
CTTTTCCGCAAGCATCTCTGTCCAAGATTGAAGGAACACAGTTTCAAAGG
CGCACGGCACATGACCGTTGAGCAGATGCAGACGGCATACGGGGTCCTTG
TGCAAGAAATACCAGACACGAAGGGTGCCTCGGTCGGCAGAATGTTGCAA
AAATACTTCATCGACGTCGGCATATCACTGACATGCGCCGAGGCACCCGA
CCAGGATGTTATTGCTTACTTATCCTCTTCGTCGCGCCACCTTCTAGCAG
TGGATGCCGGCGTCCTCTCGGCTCCTTGGGACAGCAAGAAAGCTGGAGCC
AAGTTTGGGTATACCCTTCGTGAATTTCATGAAGACGGTAAGTTAGGAGA
CGTGATTGATCGCCGGACTATTCCCGTCGGGGAGTCCGCGGCCATGCTGA
CAGGTGTGGGCAAGGAGTATGCGCTTGGAGTGCAGATGGCTGTTGATGCA
ATTAAGCTGGTGAGTCGGGGAAAGCCTTTGAGCGACGTTGCTTGTCCTCG
ATCTAGCGATACTTCCCGCCATTGTTATTTGTCCGCGGAGGAGTTGTGGA
AATATTGTCATGAGAGAAGAATTGAACTGGTGGATGATAAGAGGGTTGTG
GAAATGCTGGTGGAGTCATTTGCCCCGCTGGAAAAGAGGGAGGTGCTGCG
AAAGGAGCTGGACGAGGCGGTGCAGGAATGGTATGTGAAGCAAGAGGTGT
GA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:3725169..3727520-

>CAN33_55910-T1 ID=CAN33_55910-T1|Name=CAN33_55910-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2352bp|location=Sequence derived from alignment at NKJJ01000020.1:3725169..3727520- (Aspergillus niger FDAARGOS_311)
ATGGGCTCATCATTATCCTCGGTTTCCAATTCTTCTACCGAAGACATTGT
CATAGTAGGCGCTGGCGCCAGTGGCATAGCAGTGCTTCTTCGCTTGATCG
AACATGCTAAGGATGGCAAGAAGATTCCTCCCATCATCGTCGTTGAGAAA
GCTTCACCTCCTGGTCCAGGACTGGCATATTCTGCCGCTTGTACCGGGAC
CATCCTGAACATGCACACGGACACAATGGGTCTATATTATAACGACCCCA
AGCATTTTACGAGATGGAGAAGCGAGCTAGCCAGTGGTCCCTTCCCGTCC
CGAAGCCAATATGGAGAGTACCTGGAGGCGATGTGGTCCGAGATACTCTC
GCAAGCCCAACAGATGGGCTTGGACATCTCAATCATCCAAGACGAAGTAT
CCGACATTGACCGTCATGACGACAGTACCTTCACCTTGACACTGACAGGG
GGGCGTCGCCTTGCTGCCCAATCTGTCGTGTTGGCGCTGGGGAATTACAC
CTCCACTCTCAACACGCACCTGCTGAATCAACCGGGCTTCTTTCCCAGCC
CGTGGCCAACCTCTCAACTAAAGACCATTCCCGCCGATGCCTCGGTCCTC
ATCATCGGATCAAGGCTCTCCGCTGTTGACGCAGCGCTATTTCTCTCCAA
GAATGGCCACAAGGGCCCGTTGACCTTCATGTCGCGCAGTGGCCGCCTTC
CCAAAGTCCAGGGCGAGCCTGAGCCCTACCCGCGCCGTTACACCCTTCAC
ACCTTGGCCCGATACATCGAATCCAACCCAGCGGACGGTCTTGTCAAGCT
CACAACCACCCTTATGGATGAAATTGACGGAGTGAACAACGGAGATTGGA
CCTGGATACAGAAGCATGCCTCGCCGCTCGCTGAACTACGGGCAGACCTA
TTCGCGGCACAGGGAGGAAATGTCCATTGGCAAACCGTCCTCCGCCACAC
GGCCCCAGTAATCGAGCGTTACTGGCACTGTTTGCCTCTAGAAAGCCAGA
AGCTATTCATGGCCAAATTCTTCACTCCTTGGATGCGATATCGTCACGGA
ATGCCGGTGCAGAATGCGCAAAAGATACTCAACCTGATGGAAACCTCCCA
ACTTAGTGTCGTCGCAGGAGAGGCTGTCCACTGGGATGAGGGTGAGGGCG
CCTTCATCGCCCAGACTACCAGCGGGCCCATAGAAGCATCCTATGTCATC
GAAGCAACTGGACAAGAGAGTCATCTCGATCGCATCCCATCTCCGCTCGT
CCAGTCCGCTGTCCGAAAAGGATTATTCACCCCACACCCGATGGGTGGGG
TTGACGTCGACTTCCACACCCTCTGTACATCAACACCCGGCCTATACACT
ATGGGCTCGTTGACCCGCGGCACGCACTTCTACGTCAGCGCCATCGATCG
AACGGCTGCCCATGCGGCTCGCATCGCCGACGCACTGGTCGGGGAGCCCC
CTGCCAGACCTGTACATATCGCGATCTTTCTCGGTGCAGACGTGGCCTCG
CACCTGATAGCCAGTGACCTGGTCCCCCTGCTTCTGGCCGAGGGCCATAT
GCCTTTCCTCTTTTTGTCATCCAGCAAGCAGACACCTTCCTTAGAGGGGT
CTGATAGTCGACCTTTCGACCTGCGCAAACTGGAATTTTTCGAACGCGAG
CTTTTCCGCAAGCATCTCTGTCCAAGATTGAAGGAACACAGTTTCAAAGG
CGCACGGCACATGACCGTTGAGCAGATGCAGACGGCATACGGGGTCCTTG
TGCAAGAAATACCAGACACGAAGGGTGCCTCGGTCGGCAGAATGTTGCAA
AAATACTTCATCGACGTCGGCATATCACTGACATGCGCCGAGGCACCCGA
CCAGGATGTTATTGCTTACTTATCCTCTTCGTCGCGCCACCTTCTAGCAG
TGGATGCCGGCGTCCTCTCGGCTCCTTGGGACAGCAAGAAAGCTGGAGCC
AAGTTTGGGTATACCCTTCGTGAATTTCATGAAGACGGTAAGTTAGGAGA
CGTGATTGATCGCCGGACTATTCCCGTCGGGGAGTCCGCGGCCATGCTGA
CAGGTGTGGGCAAGGAGTATGCGCTTGGAGTGCAGATGGCTGTTGATGCA
ATTAAGCTGGTGAGTCGGGGAAAGCCTTTGAGCGACGTTGCTTGTCCTCG
ATCTAGCGATACTTCCCGCCATTGTTATTTGTCCGCGGAGGAGTTGTGGA
AATATTGTCATGAGAGAAGAATTGAACTGGTGGATGATAAGAGGGTTGTG
GAAATGCTGGTGGAGTCATTTGCCCCGCTGGAAAAGAGGGAGGTGCTGCG
AAAGGAGCTGGACGAGGCGGTGCAGGAATGGTATGTGAAGCAAGAGGTGT
GA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55910CAN33_55910Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55910-T1.cdsCAN33_55910-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55910-T1.exon1CAN33_55910-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55910-T1CAN33_55910-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR038732
DBxrefInterPro:IPR036188
DBxrefPFAM:PF13738
DBxrefPFAM:PF07992
DBxrefPFAM:PF13454
ProductFAD-NAD(P)-binding family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3725169..3727520 -
Powered by Drupal