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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:3742416..3743294- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_55935-T1 ID=CAN33_55935-T1|Name=CAN33_55935-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=879bp|location=Sequence derived from alignment at NKJJ01000020.1:3742416..3743294- (Aspergillus niger FDAARGOS_311)
ATGACTAAAAAGCTTACTGTCCTCATTACCGGCTGCTCTGATGGCGGTCT
CGGCTCTCATCTTGCTCTCCCATTTCAGGCAGCTGGATGGCGCGTCTTTG
CCACAGCTCGAAATTTGTCCAAGCTCAAGGAGGCCAAGAAGTCAGGCCTC
GAAATACTTCACCTCGACACCTTGTCTGATGACTCCATCTACAAGTGCGT
TTCTGAGGTTAGCGAGCTAACTGGCGGATCACTTGATGCGCTAGTCAATA
ACGCTGGCGCTGGATACTCAATGCCAGTCATGGACATTGATATTCAGAAG
GGACGTGATCTTTTCGAGCTCAATGTCTGGTCCATCATCAGTGTGTCGCG
GGCCTTCCTTCCCCTTCTTATGAGATCAACTCGCGAGGGTGGTGCTCTGC
TCGTTAATCACGGCTCTCTCTCCGGAACCATTGCAGCCACAGGCCCATTC
GCAGGCGTATACAACGCCTCCAAGGCAGCGGCAGCCAGCTTTACGGAGAA
CCTACGTTTGGAGCTCCAGCCGTGGAATATCAGAGTCATAAACCTGCTAA
CGGGTGCTGTCCGATCAAACTTTCATGTCAATGCGCCACGTCCCGAATTG
CCACCAGATTCGCTATTCAATATTGCCAAAGATATAGTTGAACAGGCTAT
GGATAATTCGGATGATTCTGGTGATACTGATCCTGCCACATGGGCGCGGG
AGGTTGTGCAGGAACTCAGCAAACGCAGCCCAGCATATTGGATCTGGCGT
GGCAGGTTCTCGACGTTAGTGAGAATCGGTAACATACTGCCACTGGGATT
CTTCGATCGCATTATGAAAAACATGGTAGGACTGGACGTGATCGAGCAAA
GGGTTAAGCGACAACGGTCTACTTCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:3742416..3743294- >CAN33_55935-T1 ID=CAN33_55935-T1|Name=CAN33_55935-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=879bp|location=Sequence derived from alignment at NKJJ01000020.1:3742416..3743294- (Aspergillus niger FDAARGOS_311)
ATGACTAAAAAGCTTACTGTCCTCATTACCGGCTGCTCTGATGGCGGTCT
CGGCTCTCATCTTGCTCTCCCATTTCAGGCAGCTGGATGGCGCGTCTTTG
CCACAGCTCGAAATTTGTCCAAGCTCAAGGAGGCCAAGAAGTCAGGCCTC
GAAATACTTCACCTCGACACCTTGTCTGATGACTCCATCTACAAGTGCGT
TTCTGAGGTTAGCGAGCTAACTGGCGGATCACTTGATGCGCTAGTCAATA
ACGCTGGCGCTGGATACTCAATGCCAGTCATGGACATTGATATTCAGAAG
GGACGTGATCTTTTCGAGCTCAATGTCTGGTCCATCATCAGTGTGTCGCG
GGCCTTCCTTCCCCTTCTTATGAGATCAACTCGCGAGGGTGGTGCTCTGC
TCGTTAATCACGGCTCTCTCTCCGGAACCATTGCAGCCACAGGCCCATTC
GCAGGCGTATACAACGCCTCCAAGGCAGCGGCAGCCAGCTTTACGGAGAA
CCTACGTTTGGAGCTCCAGCCGTGGAATATCAGAGTCATAAACCTGCTAA
CGGGTGCTGTCCGATCAAACTTTCATGTCAATGCGCCACGTCCCGAATTG
CCACCAGATTCGCTATTCAATATTGCCAAAGATATAGTTGAACAGGCTAT
GGATAATTCGGATGATTCTGGTGATACTGATCCTGCCACATGGGCGCGGG
AGGTTGTGCAGGAACTCAGCAAACGCAGCCCAGCATATTGGATCTGGCGT
GGCAGGTTCTCGACGTTAGTGAGAATCGGTAACATACTGCCACTGGGATT
CTTCGATCGCATTATGAAAAACATGGTAGGACTGGACGTGATCGAGCAAA
GGGTTAAGCGACAACGGTCTACTTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:3742416..3743294 - |
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