You are here

Home

CAN33_5605-T1, CAN33_5605-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5605-T1
Unique NameCAN33_5605-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1129915..1131641+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5605-T1 ID=CAN33_5605-T1|Name=CAN33_5605-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1727bp|location=Sequence derived from alignment at NKJJ01000019.1:1129915..1131641+ (Aspergillus niger FDAARGOS_311)
ATGTCCGAGCCCGAAGCTGCTGCGTCCCTGGAACGGGATCCAACAGAGGA
TTCCAACCACTATATCGATGGAGTTAAGCTTGCCGCTCTCATGATTTCAA
TATCCCTTTGCATGTTCCTTGTGTCTCTGGTAAGTTCATCCTTCCCGTTT
TGAGGGCTTAAAGATGAAGGAGCTGACCCGTGAACGCTCGCCGTCAGGAC
CGGACAATCATCTCGACCGCCCTCCCTACCATCACCAACGAATTCCATTC
CTTCGACGACATGGCATGGTACGGGAGCGCCTACATGTTGACCGGCTCGG
TAATGCAGCTGCCCCTGGGGACCCTGTACCAGATATATGCGCCCAAATAC
GTCTTTCTAGCGATTATGCTGGTGTTCATCGTGGGCTCGGCCGTGTGCGG
CGGGGCCTCGAATTCCCTTGCGGTGATCCTTGGCCGTGCTGTTCAAGGAA
TAGGGTCGGCCGGAATTACAGCCGGGTGCATGATCATCATCACTGAGACC
GTTCCGTTGCCTAAGAGGCCGATGTACATGGGAATACTGGGAGCCGTCTT
TGGCGTTTCGGCCATCGTTGGACCCCTGCTTGGGGGTGCTTTGACCACGG
GTGCTTCGTGGCGGTGGTGCTTCTTGATTAATTTGCCTATAGGCGCGGTT
GCGATGATAGTCATATTTTTGGTGTTTCCTGATGGGGGGAAAGGGGGCGA
TAAGGATGAGGTGGAACAGGATCGAACAGGGATTACTGCTGGTGGTGGCA
GCATGCGCCTTTGGAAGCGGATCCAACGGTTCAACCCGCTTGGTCTTTGT
TTCATGGTTCCTGCTGTAGTATGTCTGGTGCTCGCCCTGGAATGGGGTGG
CTCGACCTATGCTTGGAAATCCGCCCGGATAATTACGCTCCTCGTCCTTA
GCGGCGTGCTTTTCATTCTGTTTGGCGTGGACCAGTGGCTAGAAGGGGAG
TACTCGACAATCAAGCCACAGCTCATCGCAGACAGGACCGTTGCGGCCAG
TGCGCTGTACACAGCATTTATCGGCGCATCCATGATGAGCCTCGTCTATT
ACTTGCCAATCTGGTTCCAAGCAATCAAGGGCGCCAGTGCGGTCAAGTCG
GGAGAGATGAACATCCCGTTACTCCTATCCCTGGTCATCGGATCCATGAT
TTCGGGGATGCTGGTATCGAAGCTCGTTGGCTACCCATCACTGTTCATGA
TCATCTCATCGGTCCTGATGACGGTGGGTGCGGGCCTGCTCAGTACGTTC
ACAGTGGCAACAGGCCACGCTAAATGGATCTCATATCAGGTTCTCTTTGG
TATTGGCCTGGGTCTGGGCATGCAGCAGGGTGCCACAGCCGTGCAGATGG
TGGTTCACAAAGCTGACGTGCCTTCCGTACTCTCCCTTTTGTTCTTCTGT
CAACAGCTGGGAGGTTCAATTGCCCTTGCCATTGCACAGAATATTGTCTC
CAGCAAACTAGTCTCGGGTCTGCATGCCAGCCTGCCAGACGTGGATGCAT
CAGCCATCGTGAGCTCCGGGGCGACGCAACTGAGGAGCATGGTGCCGACA
AAGTCCCTAGCCACTCTCCTGCAGATATATAACGAGGCCGTGACAACTTC
TTTCTACCTCACCGCAGCCACGTCTGCAGTTACATTCCTTGCTGCGATTT
TTATTGTACCGAGGAGTTTACTTAAGACGTATTGCGAAGACGAGGAAGTA
AGTTCGGGTCAAAACAGGCCGGTCTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:1129915..1131641+

>CAN33_5605-T1 ID=CAN33_5605-T1|Name=CAN33_5605-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3318bp|location=Sequence derived from alignment at NKJJ01000019.1:1129915..1131641+ (Aspergillus niger FDAARGOS_311)
ATGTCCGAGCCCGAAGCTGCTGCGTCCCTGGAACGGGATCCAACAGAGGA
TTCCAACCACTATATCGATGGAGTTAAGCTTGCCGCTCTCATGATTTCAA
TATCCCTTTGCATGTTCCTTGTGTCTCTGGACCGGACAATCATCTCGACC
GCCCTCCCTACCATCACCAACGAATTCCATTCCTTCGACGACATGGCATG
GTACGGGAGCGCCTACATGTTGACCGGCTCGGTAATGCAGCTGCCCCTGG
GGACCCTGTACCAGATATATGCGCCCAAATACGTCTTTCTAGCGATTATG
CTGGTGTTCATCGTGGGCTCGGCCGTGTGCGGCGGGGCCTCGAATTCCCT
TGCGGTGATCCTTGGCCGTGCTGTTCAAGGAATAGGGTCGGCCGGAATTA
CAGCCGGGTGCATGATCATCATCACTGAGACCGTTCCGTTGCCTAAGAGG
CCGATGTACATGGGAATACTGGGAGCCGTCTTTGGCGTTTCGGCCATCGT
TGGACCCCTGCTTGGGGGTGCTTTGACCACGGGTGCTTCGTGGCGGTGGT
GCTTCTTGATTAATTTGCCTATAGGCGCGGTTGCGATGATAGTCATATTT
TTGGTGTTTCCTGATGGGGGGAAAGGGGGCGATAAGGATGAGGTGGAACA
GGATCGAACAGGGATTACTGCTGGTGGTGGCAGCATGCGCCTTTGGAAGC
GGATCCAACGGTTCAACCCGCTTGGTCTTTGTTTCATGGTTCCTGCTGTA
GTATGTCTGGTGCTCGCCCTGGAATGGGGTGGCTCGACCTATGCTTGGAA
ATCCGCCCGGATAATTACGCTCCTCGTCCTTAGCGGCGTGCTTTTCATTC
TGTTTGGCGTGGACCAGTGGCTAGAAGGGGAGTACTCGACAATCAAGCCA
CAGCTCATCGCAGACAGGACCGTTGCGGCCAGTGCGCTGTACACAGCATT
TATCGGCGCATCCATGATGAGCCTCGTCTATTACTTGCCAATCTGGTTCC
AAGCAATCAAGGGCGCCAGTGCGGTCAAGTCGGGAGAGATGAACATCCCG
TTACTCCTATCCCTGGTCATCGGATCCATGATTTCGGGGATGCTGGTATC
GAAGCTCGTTGGCTACCCATCACTGTTCATGATCATCTCATCGGTCCTGA
TGACGGTGGGTGCGGGCCTGCTCAGTACGTTCACAGTGGCAACAGGCCAC
GCTAAATGGATCTCATATCAGGTTCTCTTTGGTATTGGCCTGGGTCTGGG
CATGCAGCAGGGTGCCACAGCCGTGCAGATGGTGGTTCACAAAGCTGACG
TGCCTTCCGTACTCTCCCTTTTGTTCTTCTGTCAACAGCTGGGAGGTTCA
ATTGCCCTTGCCATTGCACAGAATATTGTCTCCAGCAAACTAGTCTCGGG
TCTGCATGCCAGCCTGCCAGACGTGGATGCATCAGCCATCGTGAGCTCCG
GGGCGACGCAACTGAGGAGCATGGTGCCGACAAAGTCCCTAGCCACTCTC
CTGCAGATATATAACGAGGCCGTGACAACTTCTTTCTACCTCACCGCAGC
CACGTCTGCAGTTACATTCCTTGCTGCGATTTTTATTGTACCGAGGAGTT
TACTTAAGACGTATTGCGAAGACGAGGAAGTAAGTTCGGGTCAAAACAGG
CCGGTCTAGATGTCCGAGCCCGAAGCTGCTGCGTCCCTGGAACGGGATCC
AACAGAGGATTCCAACCACTATATCGATGGAGTTAAGCTTGCCGCTCTCA
TGATTTCAATATCCCTTTGCATGTTCCTTGTGTCTCTGGACCGGACAATC
ATCTCGACCGCCCTCCCTACCATCACCAACGAATTCCATTCCTTCGACGA
CATGGCATGGTACGGGAGCGCCTACATGTTGACCGGCTCGGTAATGCAGC
TGCCCCTGGGGACCCTGTACCAGATATATGCGCCCAAATACGTCTTTCTA
GCGATTATGCTGGTGTTCATCGTGGGCTCGGCCGTGTGCGGCGGGGCCTC
GAATTCCCTTGCGGTGATCCTTGGCCGTGCTGTTCAAGGAATAGGGTCGG
CCGGAATTACAGCCGGGTGCATGATCATCATCACTGAGACCGTTCCGTTG
CCTAAGAGGCCGATGTACATGGGAATACTGGGAGCCGTCTTTGGCGTTTC
GGCCATCGTTGGACCCCTGCTTGGGGGTGCTTTGACCACGGGTGCTTCGT
GGCGGTGGTGCTTCTTGATTAATTTGCCTATAGGCGCGGTTGCGATGATA
GTCATATTTTTGGTGTTTCCTGATGGGGGGAAAGGGGGCGATAAGGATGA
GGTGGAACAGGATCGAACAGGGATTACTGCTGGTGGTGGCAGCATGCGCC
TTTGGAAGCGGATCCAACGGTTCAACCCGCTTGGTCTTTGTTTCATGGTT
CCTGCTGTAGTATGTCTGGTGCTCGCCCTGGAATGGGGTGGCTCGACCTA
TGCTTGGAAATCCGCCCGGATAATTACGCTCCTCGTCCTTAGCGGCGTGC
TTTTCATTCTGTTTGGCGTGGACCAGTGGCTAGAAGGGGAGTACTCGACA
ATCAAGCCACAGCTCATCGCAGACAGGACCGTTGCGGCCAGTGCGCTGTA
CACAGCATTTATCGGCGCATCCATGATGAGCCTCGTCTATTACTTGCCAA
TCTGGTTCCAAGCAATCAAGGGCGCCAGTGCGGTCAAGTCGGGAGAGATG
AACATCCCGTTACTCCTATCCCTGGTCATCGGATCCATGATTTCGGGGAT
GCTGGTATCGAAGCTCGTTGGCTACCCATCACTGTTCATGATCATCTCAT
CGGTCCTGATGACGGTGGGTGCGGGCCTGCTCAGTACGTTCACAGTGGCA
ACAGGCCACGCTAAATGGATCTCATATCAGGTTCTCTTTGGTATTGGCCT
GGGTCTGGGCATGCAGCAGGGTGCCACAGCCGTGCAGATGGTGGTTCACA
AAGCTGACGTGCCTTCCGTACTCTCCCTTTTGTTCTTCTGTCAACAGCTG
GGAGGTTCAATTGCCCTTGCCATTGCACAGAATATTGTCTCCAGCAAACT
AGTCTCGGGTCTGCATGCCAGCCTGCCAGACGTGGATGCATCAGCCATCG
TGAGCTCCGGGGCGACGCAACTGAGGAGCATGGTGCCGACAAAGTCCCTA
GCCACTCTCCTGCAGATATATAACGAGGCCGTGACAACTTCTTTCTACCT
CACCGCAGCCACGTCTGCAGTTACATTCCTTGCTGCGATTTTTATTGTAC
CGAGGAGTTTACTTAAGACGTATTGCGAAGACGAGGAAGTAAGTTCGGGT
CAAAACAGGCCGGTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_5605CAN33_5605Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5605-T1.exon1CAN33_5605-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_5605-T1.exon2CAN33_5605-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5605-T1.cdsCAN33_5605-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5605-T1CAN33_5605-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000191.2
NoteEggNog:ENOG41
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Productmajor facilitator superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1129915..1131641 +
Powered by Drupal