|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1200286..1202608+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5705-T1 ID=CAN33_5705-T1|Name=CAN33_5705-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2323bp|location=Sequence derived from alignment at NKJJ01000019.1:1200286..1202608+ (Aspergillus niger FDAARGOS_311)
ATGCGTTTGCTAAATACGTACTTGTCTGACACACAGGACTTTGTAATTCA
GGAATTTTTGGATTATGAACTACCGCCGTACGCTATTCTGTCACATACCT
GGGGCAAAGAGGAAGTCACTTATCAGGAAGTCAATACGGCCAGCGCGAAG
GAAAAAAGCGGTTTCGAGAAAATAACACAATGCTGCTCGGTAGCAAGGGC
AGATGGGTACAAGTACATCTGGATCGATACATGTTGCATTGACAAGACAA
GCAGTGCGGAGTTGTCTGAGGCGATCAACTCCATGTATCTCTGGTACCAA
AAGGCTGAGGTATGCTACGCAATTCTTGAGGACGTACGGTCTGAAGAAGA
GATTGCCCAGAGTAAATGGCTTACCAGAGGCTGGACACTTCAAGAGCTGA
TCGCTCCATCAAGGGTGATATTCTTGAACGAAAGGTGGGAAGTGCTTGGA
GATAGAGCAACTCTCCGGGATCAATTATCTGAATATACTGGGATACCCGC
CGGAATTTTGTCCGGAGAAGACGACCTTGAAACATCTAGCGTGGCTCAGA
GAATGTCTTGGGCTGCGAAAAGACAGACATCGAGAGTGGAGGACCGTGCC
TATTCTCTAATGGGCATATTTAACGTGCATATGCCGCTGATCTATGGAGA
AGGTGAAACCGCTTTCATCAGACTTCAGGAGGAAATCATGCGGATATCAG
ACGATCAGAGTCTGTTCGCATGGGCGTCTTCCGATGATCGCGGCGGGCTT
CTCGCTACTTCTCCTGCCGCATTCGCCAATTCCCATAACATTGTTCGATT
CAATCCGTTTGGTAGTCTCGACAGCCCTTCCACTGTGAGTAGTCGAGGGG
TTCGTTTAGATCTCGGCTTCACAGGATTATCAGGCGACGGCCTAGGTCTC
GCAATCCTTAACTGCGCGGAAAGAACCTGCACAAAAAAAACTGAGCAAGA
TAAGATTATTGCTATCTACTTGAAGGATTTGACTTTCACTATGCATCTGT
TCAAGAGGGTCCAAAGTGGGATTTTGCGAAAAATATATCTCGGAACCTTT
CGACCTACCCGATATCTTGTGACAAGGATTTGTGTCCAAGGTGGTCACAC
AATGCTCATACAAAAGCGTACCACCGTAAAACAGGATTGCATCTCCCCAC
AAGAGATTCATCTTGACAGGAAGCTAAGACTGCCTATGCACTACAGAAAT
CCAGCAGCTCTGCTGGTAGCCGCAAAAGCAGGAGAAGGAGATAGTGTGTG
GTTACTGTTGACTCAGAGTAATGTCAGGATAGATATAAGGGATCGGAATG
GTCAGACGCCGCTATCATTGGCTGCAGAAAATGGGCATGAAGGCATTGTC
CAAATGCTTCTTGTGAGAGGCGCTACAATCGAGACTAAAAATTCAAGTGA
GCAGACACCGCTATTATTAGCCGCGCAAAATGGACATGAAGGCATTGTCC
AGATGCTTCTTGAAAGAGGCACGACAACGGAGACCCAGGATTCGAAAAGT
CAAACACCGCTATTGCTGGCTGCGGTGAATGGACATGAAAGCGTCGTGCA
GATGCTTCTTGAGAGAGGCGCCAGAACTGAGCCAAACACGAAATATGGCC
ATACACCACTATCATTGGCTGCAGCGAAGGGACATGAAGGCATTGTCCAG
ATGCTTCTTCAGAGAGGGGCTGATACTGAGTATAGAAACCCATCTGGTCA
GACACCACTACTACTGGCGGCAGAGGAGGGACATGAAGGCATTGTCAAGA
TGCTTCTTGAGAGGGGTGCCAATACTAAGAAAAAATATATCTGGAGTCGG
AAAACACCGCTATCAGTGGCTGCAGCGAATGGGCATGAAAGCATTGTCCA
GATGCTTTCTGAGAGACGCCTCTTTTCACTACTTCAACCTTTGCCTCCTC
CCCTCTCCAGATAATCATTCAATTTATCTCTTTTCACTACATCCTTTGTC
TCTTTCTCTCTCGGAATAAATATTTAGTATATCTTTTTTTTTTTTTAGGC
CTTTGTCTCCTCCTCTTTCTGAATAACTTTTTAATAGATTACAAGGTGTT
CTCCGTCTGCTGAAATGGAACGAGATGGTACTGTTGGACAGCTGCGTGAC
ACCACGAAAAGTTGAAGGTAGTCAAGCCTACCGGGAACTCGGCCGGCTCA
CCTTACTCAAGCTCTGGGATACAAGCACCGGCACAGATCAGCAGACGACC
GGCCATATTGATCTCGTGTTTTCTGTTGCGAACAAAGATCCCGTCAAATC
ATTGGGTCTCCTGAGGAAGAGAGATCCGTTGTGGCTCTCCATCTACTATG
ATTCATTCACTGTCATGATGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1200286..1202608+ >CAN33_5705-T1 ID=CAN33_5705-T1|Name=CAN33_5705-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2166bp|location=Sequence derived from alignment at NKJJ01000019.1:1200286..1202608+ (Aspergillus niger FDAARGOS_311)
ATGCGTTTGCTAAATACGTACTTGTCTGACACACAGGACTTTGTAATTCA
GGAATTTTTGGATTATGAACTACCGCCGTACGCTATTCTGTCACATACCT
GGGGCAAAGAGGAAGTCACTTATCAGGAAGTCAATACGGCCAGCGCGAAG
GAAAAAAGCGGTTTCGAGAAAATAACACAATGCTGCTCGGTAGCAAGGGC
AGATGGGTACAAGTACATCTGGATCGATACATGTTGCATTGACAAGACAA
GCAGTGCGGAGTTGTCTGAGGCGATCAACTCCATGTATCTCTGGTACCAA
AAGGCTGAGGTATGCTACGCAATTCTTGAGGACGTACGGTCTGAAGAAGA
GATTGCCCAGAGTAAATGGCTTACCAGAGGCTGGACACTTCAAGAGCTGA
TCGCTCCATCAAGGGTGATATTCTTGAACGAAAGGTGGGAAGTGCTTGGA
GATAGAGCAACTCTCCGGGATCAATTATCTGAATATACTGGGATACCCGC
CGGAATTTTGTCCGGAGAAGACGACCTTGAAACATCTAGCGTGGCTCAGA
GAATGTCTTGGGCTGCGAAAAGACAGACATCGAGAGTGGAGGACCGTGCC
TATTCTCTAATGGGCATATTTAACGTGCATATGCCGCTGATCTATGGAGA
AGGTGAAACCGCTTTCATCAGACTTCAGGAGGAAATCATGCGGATATCAG
ACGATCAGAGTCTGTTCGCATGGGCGTCTTCCGATGATCGCGGCGGGCTT
CTCGCTACTTCTCCTGCCGCATTCGCCAATTCCCATAACATTGTTCGATT
CAATCCGTTTGGTAGTCTCGACAGCCCTTCCACTATGGTACTGTTGGACA
GCTGCGTGACACCACGAAAAGTTGAAGGTAGTCAAGCCTACCGGGAACTC
GGCCGGCTCACCTTACTCAAGCTCTGGGATACAAGCACCGGCACAGATCA
GCAGACGACCGGCCATATTGATCTCGTGTTTTCTGTTGCGAACAAAGATC
CCGTCAAATCATTGGGTCTCCTGAGGAAGAGAGATCCGTTGTGGCTCTCC
ATCTACTATGATTCATTCACTGTCATGATGTAGATGCGTTTGCTAAATAC
GTACTTGTCTGACACACAGGACTTTGTAATTCAGGAATTTTTGGATTATG
AACTACCGCCGTACGCTATTCTGTCACATACCTGGGGCAAAGAGGAAGTC
ACTTATCAGGAAGTCAATACGGCCAGCGCGAAGGAAAAAAGCGGTTTCGA
GAAAATAACACAATGCTGCTCGGTAGCAAGGGCAGATGGGTACAAGTACA
TCTGGATCGATACATGTTGCATTGACAAGACAAGCAGTGCGGAGTTGTCT
GAGGCGATCAACTCCATGTATCTCTGGTACCAAAAGGCTGAGGTATGCTA
CGCAATTCTTGAGGACGTACGGTCTGAAGAAGAGATTGCCCAGAGTAAAT
GGCTTACCAGAGGCTGGACACTTCAAGAGCTGATCGCTCCATCAAGGGTG
ATATTCTTGAACGAAAGGTGGGAAGTGCTTGGAGATAGAGCAACTCTCCG
GGATCAATTATCTGAATATACTGGGATACCCGCCGGAATTTTGTCCGGAG
AAGACGACCTTGAAACATCTAGCGTGGCTCAGAGAATGTCTTGGGCTGCG
AAAAGACAGACATCGAGAGTGGAGGACCGTGCCTATTCTCTAATGGGCAT
ATTTAACGTGCATATGCCGCTGATCTATGGAGAAGGTGAAACCGCTTTCA
TCAGACTTCAGGAGGAAATCATGCGGATATCAGACGATCAGAGTCTGTTC
GCATGGGCGTCTTCCGATGATCGCGGCGGGCTTCTCGCTACTTCTCCTGC
CGCATTCGCCAATTCCCATAACATTGTTCGATTCAATCCGTTTGGTAGTC
TCGACAGCCCTTCCACTATGGTACTGTTGGACAGCTGCGTGACACCACGA
AAAGTTGAAGGTAGTCAAGCCTACCGGGAACTCGGCCGGCTCACCTTACT
CAAGCTCTGGGATACAAGCACCGGCACAGATCAGCAGACGACCGGCCATA
TTGATCTCGTGTTTTCTGTTGCGAACAAAGATCCCGTCAAATCATTGGGT
CTCCTGAGGAAGAGAGATCCGTTGTGGCTCTCCATCTACTATGATTCATT
CACTGTCATGATGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | Heterokaryon incompatibility protein (HET) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1200286..1202608 + |
|
