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CAN33_5730-T1, CAN33_5730-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5730-T1
Unique NameCAN33_5730-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1218391..1219828+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5730-T1 ID=CAN33_5730-T1|Name=CAN33_5730-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1438bp|location=Sequence derived from alignment at NKJJ01000019.1:1218391..1219828+ (Aspergillus niger FDAARGOS_311)
ATGTCCACCTACACCATCGTCAGCGGCGACTCATTATGGAAAATCTCCCA
AGACCACGGCGTCACCCTCGACGCCCTCCGAGCAGCCAACCCGCAGATCA
CCAACCCAGATCTTATCTATCCGGGGCAAGAGCTGAATATTCCGGGGCCT
GATCAGCCTCCTCCGGAAAGTCGCAGCATCCCGGGTGATGTCCCAGGCCA
AGCTCCTCCTCCTTCTTCTGCTCCTCCTGTTCACCTTGCCGTCTGTCCCC
CAGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGCACCGCCCGCCATTCCC
CCGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGAG
ACCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGTATGTTATAGCT
TTAACTATTTGTATAAATCATTTGACTAATAAACGTGACAGGGAGTCTAC
GGCCGCAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACAT
TCTCTGTACGTTCTATCCCAATTCTATCATAGCGCTAGTCTAACATCAAT
AGATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTGTACGTTTCACTCT
TCCCCTCCAAACCAATCCACCAAGCTAACATTTAGAAATGTAGCTTCCTC
ACCGACACCTACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTC
CGAGCCCGGTACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAA
AACAACAACACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACC
TACAGTCCCAACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAAC
CTTCGCCCGCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCA
TCGACATCGACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTT
GTGCACCTTTTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCAC
CCATCTTGGCGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGC
CGGACAATATCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGAT
TTCTGGAATCTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTC
CGGCCATATGGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGT
TCTGTGCAGATGGGGCGGTGACGATGTATTTGAGGGGTGGGGTGAGGGAT
GCGAGGAAGCTTATATTTGGGTTGCCGTTGTATGGAAGGGCTTTTGAGGG
GACGGATGGGCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGGGAGTTGGG
AGAATGGGGTGTGGGATTATAAGGCTTTGCCGTTGCAGGGGAGTCAGGAG
GTGGTGGATGGGCGGTTGATGGCCAGTTGGTGTTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1218391..1219828+

>CAN33_5730-T1 ID=CAN33_5730-T1|Name=CAN33_5730-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6444bp|location=Sequence derived from alignment at NKJJ01000019.1:1218391..1219828+ (Aspergillus niger FDAARGOS_311)
ATGTCCACCTACACCATCGTCAGCGGCGACTCATTATGGAAAATCTCCCA
AGACCACGGCGTCACCCTCGACGCCCTCCGAGCAGCCAACCCGCAGATCA
CCAACCCAGATCTTATCTATCCGGGGCAAGAGCTGAATATTCCGGGGCCT
GATCAGCCTCCTCCGGAAAGTCGCAGCATCCCGGGGCCGCCGGTTGTTCC
AGGCGCTGCTGGAGCACCGCCCGCCATTCCCCCGCGTCCTCCGATGGCCC
GTCCGCCGCCTCCGTGGATCAATGCCGGGAGACCGGGGTATAAGACTGTT
GGGTACTTTACTAACTGGGGAGTCTACGGCCGCAATTACCAACCTCAAGA
TATTCCTGCGGAGTATATCACTCACATTCTCTATTCCTTCGCCAACATCC
GCCCCACCGGCGAAGTCTTCCTCACCGACACCTACTCCGACCTCGAAAAG
CACTACCCAACCGATAGCTGGTCCGAGCCCGGTACCAACGCCTACGGATG
CATCAAGCAACTCTACCTCCTAAAACAACAACACCGCCACCTGAAAACCC
TCCTTTCCATCGGCGGCTGGACCTACAGTCCCAACTTCGCCGCGCCAGCA
TCCACGCCCCGCGGTCGCGAAACCTTCGCCCGCAGCGCCGTGCACCTCCT
CGCGGACCTGGGCTTCGACGGCATCGACATCGACTGGGAGTATCCAGCCG
ATTCATCGCAAGCGATGGACTTTGTGCACCTTTTGCGGGATGTGAGGCGC
GTGCTGGACGAGTACTCCGCCACCCATCTTGGCGGAAAGAGACTGTTATT
GACGATCGCGGCGCCGTGCGGGCCGGACAATATCCAGAAACTGCGGATAG
GCGATATGGATCCGTATCTTGATTTCTGGAATCTGATGTGTTATGATTTC
AGCGGGAGCTGGGATAAGTGTTCCGGCCATATGGCGAATGTGTTCCATTC
GGGGAGGGGGGAGATTACGCCGTTCTGTGCAGATGGGGCGGTGACGATGT
ATTTGAGGGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGATGGGCG
GTTGATGGCCAGTTGGTGTTTTGAATGTCCACCTACACCATCGTCAGCGG
CGACTCATTATGGAAAATCTCCCAAGACCACGGCGTCACCCTCGACGCCC
TCCGAGCAGCCAACCCGCAGATCACCAACCCAGATCTTATCTATCCGGGG
CAAGAGCTGAATATTCCGGGGCCTGATCAGCCTCCTCCGGAAAGTCGCAG
CATCCCGGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGCACCGCCCGCCA
TTCCCCCGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGTGGATCAATGCC
GGGAGACCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGGAGTCTA
CGGCCGCAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACA
TTCTCTATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTCTTCCTCACC
GACACCTACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTCCGA
GCCCGGTACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAAAAC
AACAACACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACCTAC
AGTCCCAACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAACCTT
CGCCCGCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCATCG
ACATCGACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTTGTG
CACCTTTTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCACCCA
TCTTGGCGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGCCGG
ACAATATCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGATTTC
TGGAATCTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTCCGG
CCATATGGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGTTCT
GTGCAGATGGGGCGGTGACGATGTATTTGAGGGGCTTTGCCGTTGCAGGG
GAGTCAGGAGGTGGTGGATGGGCGGTTGATGGCCAGTTGGTGTTTTGAAT
GTCCACCTACACCATCGTCAGCGGCGACTCATTATGGAAAATCTCCCAAG
ACCACGGCGTCACCCTCGACGCCCTCCGAGCAGCCAACCCGCAGATCACC
AACCCAGATCTTATCTATCCGGGGCAAGAGCTGAATATTCCGGGGCCTGA
TCAGCCTCCTCCGGAAAGTCGCAGCATCCCGGGGCCGCCGGTTGTTCCAG
GCGCTGCTGGAGCACCGCCCGCCATTCCCCCGCGTCCTCCGATGGCCCGT
CCGCCGCCTCCGTGGATCAATGCCGGGAGACCGGGGTATAAGACTGTTGG
GTACTTTACTAACTGGGGAGTCTACGGCCGCAATTACCAACCTCAAGATA
TTCCTGCGGAGTATATCACTCACATTCTCTATTCCTTCGCCAACATCCGC
CCCACCGGCGAAGTCTTCCTCACCGACACCTACTCCGACCTCGAAAAGCA
CTACCCAACCGATAGCTGGTCCGAGCCCGGTACCAACGCCTACGGATGCA
TCAAGCAACTCTACCTCCTAAAACAACAACACCGCCACCTGAAAACCCTC
CTTTCCATCGGCGGCTGGACCTACAGTCCCAACTTCGCCGCGCCAGCATC
CACGCCCCGCGGTCGCGAAACCTTCGCCCGCAGCGCCGTGCACCTCCTCG
CGGACCTGGGCTTCGACGGCATCGACATCGACTGGGAGTATCCAGCCGAT
TCATCGCAAGCGATGGACTTTGTGCACCTTTTGCGGGATGTGAGGCGCGT
GCTGGACGAGTACTCCGCCACCCATCTTGGCGGAAAGAGACTGTTATTGA
CGATCGCGGCGCCGTGCGGGCCGGACAATATCCAGAAACTGCGGATAGGC
GATATGGATCCGTATCTTGATTTCTGGAATCTGATGTGTTATGATTTCAG
CGGGAGCTGGGATAAGTGTTCCGGCCATATGGCGAATGTGTTCCATTCGG
GGAGGGGGGAGATTACGCCGTTCTGTGCAGATGGGGCGGTGACGATGTAT
TTGAGGGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGATGGGCGGT
TGATGGCCAGTTGGTGTTTTGAATGTCCACCTACACCATCGTCAGCGGCG
ACTCATTATGGAAAATCTCCCAAGACCACGGCGTCACCCTCGACGCCCTC
CGAGCAGCCAACCCGCAGATCACCAACCCAGATCTTATCTATCCGGGGCA
AGAGCTGAATATTCCGGGGCCTGATCAGCCTCCTCCGGAAAGTCGCAGCA
TCCCGGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGCACCGCCCGCCATT
CCCCCGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGG
GAGACCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGGAGTCTACG
GCCGCAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACATT
CTCTATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTCTTCCTCACCGA
CACCTACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTCCGAGC
CCGGTACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAAAACAA
CAACACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACCTACAG
TCCCAACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAACCTTCG
CCCGCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCATCGAC
ATCGACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTTGTGCA
CCTTTTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCACCCATC
TTGGCGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGCCGGAC
AATATCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGATTTCTG
GAATCTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCC
ATATGGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGTTCTGT
GCAGATGGGGCGGTGACGATGTATTTGAGGGGCTTTGCCGTTGCAGGGGA
GTCAGGAGGTGGTGGATGGGCGGTTGATGGCCAGTTGGTGTTTTGAATGT
CCACCTACACCATCGTCAGCGGCGACTCATTATGGAAAATCTCCCAAGAC
CACGGCGTCACCCTCGACGCCCTCCGAGCAGCCAACCCGCAGATCACCAA
CCCAGATCTTATCTATCCGGGGCAAGAGCTGAATATTCCGGGGCCTGATC
AGCCTCCTCCGGAAAGTCGCAGCATCCCGGGGCCGCCGGTTGTTCCAGGC
GCTGCTGGAGCACCGCCCGCCATTCCCCCGCGTCCTCCGATGGCCCGTCC
GCCGCCTCCGTGGATCAATGCCGGGAGACCGGGGTATAAGACTGTTGGGT
ACTTTACTAACTGGGGAGTCTACGGCCGCAATTACCAACCTCAAGATATT
CCTGCGGAGTATATCACTCACATTCTCTATTCCTTCGCCAACATCCGCCC
CACCGGCGAAGTCTTCCTCACCGACACCTACTCCGACCTCGAAAAGCACT
ACCCAACCGATAGCTGGTCCGAGCCCGGTACCAACGCCTACGGATGCATC
AAGCAACTCTACCTCCTAAAACAACAACACCGCCACCTGAAAACCCTCCT
TTCCATCGGCGGCTGGACCTACAGTCCCAACTTCGCCGCGCCAGCATCCA
CGCCCCGCGGTCGCGAAACCTTCGCCCGCAGCGCCGTGCACCTCCTCGCG
GACCTGGGCTTCGACGGCATCGACATCGACTGGGAGTATCCAGCCGATTC
ATCGCAAGCGATGGACTTTGTGCACCTTTTGCGGGATGTGAGGCGCGTGC
TGGACGAGTACTCCGCCACCCATCTTGGCGGAAAGAGACTGTTATTGACG
ATCGCGGCGCCGTGCGGGCCGGACAATATCCAGAAACTGCGGATAGGCGA
TATGGATCCGTATCTTGATTTCTGGAATCTGATGTGTTATGATTTCAGCG
GGAGCTGGGATAAGTGTTCCGGCCATATGGCGAATGTGTTCCATTCGGGG
AGGGGGGAGATTACGCCGTTCTGTGCAGATGGGGCGGTGACGATGTATTT
GAGGGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGATGGGCGGTTG
ATGGCCAGTTGGTGTTTTGAATGTCCACCTACACCATCGTCAGCGGCGAC
TCATTATGGAAAATCTCCCAAGACCACGGCGTCACCCTCGACGCCCTCCG
AGCAGCCAACCCGCAGATCACCAACCCAGATCTTATCTATCCGGGGCAAG
AGCTGAATATTCCGGGGCCTGATCAGCCTCCTCCGGAAAGTCGCAGCATC
CCGGGGCCGCCGGTTGTTCCAGGCGCTGCTGGAGCACCGCCCGCCATTCC
CCCGCGTCCTCCGATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGA
GACCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGGAGTCTACGGC
CGCAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACATTCT
CTATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTCTTCCTCACCGACA
CCTACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTCCGAGCCC
GGTACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAAAACAACA
ACACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACCTACAGTC
CCAACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAACCTTCGCC
CGCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCATCGACAT
CGACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTTGTGCACC
TTTTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCACCCATCTT
GGCGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGCCGGACAA
TATCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGATTTCTGGA
ATCTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCCAT
ATGGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGTTCTGTGC
AGATGGGGCGGTGACGATGTATTTGAGGGGCTTTGCCGTTGCAGGGGAGT
CAGGAGGTGGTGGATGGGCGGTTGATGGCCAGTTGGTGTTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CTS1CAN33_5730Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5730-T1CAN33_5730-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5730-T1.exon1CAN33_5730-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_5730-T1.exon2CAN33_5730-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_5730-T1.exon3CAN33_5730-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_5730-T1.exon4CAN33_5730-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_5730-T1.exon5CAN33_5730-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_5730-T1.exon6CAN33_5730-T1.exon6Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5730-T1.cdsCAN33_5730-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR036779
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR011583
DBxrefInterPro:IPR018392
DBxrefPFAM:PF01476
DBxrefPFAM:PF00704
ProductEndochitinase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1218391..1219828 +
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