You are here

Home

CAN33_5865-T1, CAN33_5865-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5865-T1
Unique NameCAN33_5865-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1299587..1300973-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5865-T1 ID=CAN33_5865-T1|Name=CAN33_5865-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1387bp|location=Sequence derived from alignment at NKJJ01000019.1:1299587..1300973- (Aspergillus niger FDAARGOS_311)
ATGGCCGAACTCGCACAAGATGATCTACAGAATCAATTCTACGTACTAGT
AACCGGCGCAAACAGGTACCCATCCCTCCATACCACCTCACCACCACGCC
CCCCTCGCAGCACACCAAACAATCTAACAAATACACCAGCGGCCTCGGCC
TCGCCATCTGCGCCCGTCTAATAACGGACTTCCTCACCACGCACCCATCA
ACCCACCACCTAACCATAATCTTCACGACCCGGAGCCCCAAAAAAGCCTC
CTCGACCCTCCACCACCTCCAAACCCTCCTCCCACCTATATCCTCCCCCA
CTCAATCCTCCAGAATAACCCTCCACCCCGAAACCGTCGACCTCTCCTCC
CTCCCCTCCGTCCGCGCCCTCTCCCAGCGACTCACAACCACCATCCCTAA
ACTCGACTCCATCGTCCTCAACGCCGGCATCGGCGGCTGGACAGGGATCG
ACTGGCCGCGCGCAATCTGGGGAACCCTCACAGACCTCGTACATAGTGTG
TCATGGTTCGCGCACAAGATAGCCCCCGTGGGGATGATCACCCCTCCTCA
AACTACACAGCCTTCGGAGCCGCGGCTGGGAAGCGTCTTCACGGCGAACG
TATTCGGACACTACATGCTCTCGCATAACGTCATGGGCCTGCTGCGGAAA
TCCACCCAGCCGGGACGAGTAATCTGGGTATCGAGTATCGAGGCCACCGT
GAACCATTTCAATGTCGATGATATCCAGGGACTGAGGACGAAGGTGCCTT
ATGAGAGTTCGAAGACACTTACGGATATTCTCGCGCTCACGGCCGAGTCG
CCTTCCACTCAAAAATGGATAGAGGGGTTTTATGCCCCCCTGATAGTAAT
GGGGAGAAGGGTGAAGGGGATGGTGAAGGTACACGCCCACGCATGTACCT
CTCGCACCCTGGTGTCTGCGGAACTGGGATCCTGCCGCTGGCGCTCCCGC
TGTTCTGGGCGATGATCGCGTCGTTTTATATTGCGCGGTTGCTGGGATCG
CCGTGGCATACGCTGTCGACGTATGCGGGGGCGTGTGCGCCGACGTGGTT
GGCTGTGAGTCGGCAGGATGAGCTGGACGCTGCGGAGGAGGTGTATCGGG
CTCATGGTGGGGGGAAGGTTAAATGGGGGTCGTCGTGTGATCGGTTGGGG
AGGGATAAGGCTGTTTCGACAGAGGTGGATGGGTGGGGACATGGGGGCGT
GGTTGGGGAGGCGGTGGTGATGGAGGATCGGTGTCGGAGGAGGAAGCGCG
GGGCGAAGGATTTGACGGCGGAGGAGAAGGTCGAGTTTGAGGAGTTAGGA
AGGAAGTGTTGGCAGGGGATGGAGGAGTTGAGGGTGCAGTGGGAGGAGAT
CTTGGAGAGGGAAGAAAGGGAGGGCGGTGCTGCTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:1299587..1300973-

>CAN33_5865-T1 ID=CAN33_5865-T1|Name=CAN33_5865-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3789bp|location=Sequence derived from alignment at NKJJ01000019.1:1299587..1300973- (Aspergillus niger FDAARGOS_311)
TAATGGGGAGAAGGGTGAAGGGGATGGTGAAGGTACACGCCCACGCATGT
ACCTCTCGCACCCTGGTGTCTGCGGAACTGGGATCCTGCCGCTGGCGCTC
CCGCTGTTCTGGGCGATGATCGCGTCGTTTTATATTGCGCGGTTGCTGGG
ATCGCCGTGGCATACGCTGTCGACGTATGCGGGGGCGTGTGCGCCGACGT
GGTTGGCTGTGAGTCGGCAGGATGAGCTGGACGCTGCGGAGGAGGTGTAT
CGGGCTCATGGTGGGGGGAAGGTTAAATGGGGGTCGTCGTGTGATCGGTT
GGGGAGGGATAAGGCTGTTTCGACAGAGGTGGATGGGTGGGGACATGGGG
GCGTGGTTGGGGAGGCGGTGGTGATGGAGGATCGGTGTCGGAGGAGGAAG
CGCGGGGCGAAGGATTTGACGGCGGAGGAGAAGGTCGAGTTTGAGGAGTT
AGGAAGGAAGTGTTGGCAGGGGATGGAGGAGTTGAGGGTGCAGTGGGAGG
AGATCTTGGAGAGGGAAGAAAGGGAGGGCGGTGCTGCTTAGCGGCCTCGG
CCTCGCCATCTGCGCCCGTCTAATAACGGACTTCCTCACCACGCACCCAT
CAACCCACCACCTAACCATAATCTTCACGACCCGGAGCCCCAAAAAAGCC
TCCTCGACCCTCCACCACCTCCAAACCCTCCTCCCACCTATATCCTCCCC
CACTCAATCCTCCAGAATAACCCTCCACCCCGAAACCGTCGACCTCTCCT
CCCTCCCCTCCGTCCGCGCCCTCTCCCAGCGACTCACAACCACCATCCCT
AAACTCGACTCCATCGTCCTCAACGCCGGCATCGGCGGCTGGACAGGGAT
CGACTGGCCGCGCGCAATCTGGGGAACCCTCACAGACCTCGTACATAGTG
TGTCATGGTTCGCGCACAAGATAGCCCCCGTGGGGATGATCACCCCTCCT
CAAACTACACAGCCTTCGGAGCCGCGGCTGGGAAGCGTCTTCACGGCGAA
CGTATTCGGACACTACATGCTCTCGCATAACGTCATGGGCCTGCTGCGGA
AATCCACCCAGCCGGGACGAGTAATCTGGGTATCGAGTATCGAGGCCACC
GTGAACCATTTCAATGTCGATGATATCCAGGGACTGAGGACGAAGGTGCC
TTATGAGAGTTCGAAGACACTTACGGATATTCTCGCGCTCACGGCCGAAT
GGCCGAACTCGCACAAGATGATCTACAGAATCAATTCTACGTACTAGTAA
CCGGCGCAAACAGTAATGGGGAGAAGGGTGAAGGGGATGGTGAAGGTACA
CGCCCACGCATGTACCTCTCGCACCCTGGTGTCTGCGGAACTGGGATCCT
GCCGCTGGCGCTCCCGCTGTTCTGGGCGATGATCGCGTCGTTTTATATTG
CGCGGTTGCTGGGATCGCCGTGGCATACGCTGTCGACGTATGCGGGGGCG
TGTGCGCCGACGTGGTTGGCTGTGAGTCGGCAGGATGAGCTGGACGCTGC
GGAGGAGGTGTATCGGGCTCATGGTGGGGGGAAGGTTAAATGGGGGTCGT
CGTGTGATCGGTTGGGGAGGGATAAGGCTGTTTCGACAGAGGTGGATGGG
TGGGGACATGGGGGCGTGGTTGGGGAGGCGGTGGTGATGGAGGATCGGTG
TCGGAGGAGGAAGCGCGGGGCGAAGGATTTGACGGCGGAGGAGAAGGTCG
AGTTTGAGGAGTTAGGAAGGAAGTGTTGGCAGGGGATGGAGGAGTTGAGG
GTGCAGTGGGAGGAGATCTTGGAGAGGGAAGAAAGGGAGGGCGGTGCTGC
TTAGCGGCCTCGGCCTCGCCATCTGCGCCCGTCTAATAACGGACTTCCTC
ACCACGCACCCATCAACCCACCACCTAACCATAATCTTCACGACCCGGAG
CCCCAAAAAAGCCTCCTCGACCCTCCACCACCTCCAAACCCTCCTCCCAC
CTATATCCTCCCCCACTCAATCCTCCAGAATAACCCTCCACCCCGAAACC
GTCGACCTCTCCTCCCTCCCCTCCGTCCGCGCCCTCTCCCAGCGACTCAC
AACCACCATCCCTAAACTCGACTCCATCGTCCTCAACGCCGGCATCGGCG
GCTGGACAGGGATCGACTGGCCGCGCGCAATCTGGGGAACCCTCACAGAC
CTCGTACATAGTGTGTCATGGTTCGCGCACAAGATAGCCCCCGTGGGGAT
GATCACCCCTCCTCAAACTACACAGCCTTCGGAGCCGCGGCTGGGAAGCG
TCTTCACGGCGAACGTATTCGGACACTACATGCTCTCGCATAACGTCATG
GGCCTGCTGCGGAAATCCACCCAGCCGGGACGAGTAATCTGGGTATCGAG
TATCGAGGCCACCGTGAACCATTTCAATGTCGATGATATCCAGGGACTGA
GGACGAAGGTGCCTTATGAGAGTTCGAAGACACTTACGGATATTCTCGCG
CTCACGGCCGAATGGCCGAACTCGCACAAGATGATCTACAGAATCAATTC
TACGTACTAGTAACCGGCGCAAACAGTAATGGGGAGAAGGGTGAAGGGGA
TGGTGAAGGTACACGCCCACGCATGTACCTCTCGCACCCTGGTGTCTGCG
GAACTGGGATCCTGCCGCTGGCGCTCCCGCTGTTCTGGGCGATGATCGCG
TCGTTTTATATTGCGCGGTTGCTGGGATCGCCGTGGCATACGCTGTCGAC
GTATGCGGGGGCGTGTGCGCCGACGTGGTTGGCTGTGAGTCGGCAGGATG
AGCTGGACGCTGCGGAGGAGGTGTATCGGGCTCATGGTGGGGGGAAGGTT
AAATGGGGGTCGTCGTGTGATCGGTTGGGGAGGGATAAGGCTGTTTCGAC
AGAGGTGGATGGGTGGGGACATGGGGGCGTGGTTGGGGAGGCGGTGGTGA
TGGAGGATCGGTGTCGGAGGAGGAAGCGCGGGGCGAAGGATTTGACGGCG
GAGGAGAAGGTCGAGTTTGAGGAGTTAGGAAGGAAGTGTTGGCAGGGGAT
GGAGGAGTTGAGGGTGCAGTGGGAGGAGATCTTGGAGAGGGAAGAAAGGG
AGGGCGGTGCTGCTTAGCGGCCTCGGCCTCGCCATCTGCGCCCGTCTAAT
AACGGACTTCCTCACCACGCACCCATCAACCCACCACCTAACCATAATCT
TCACGACCCGGAGCCCCAAAAAAGCCTCCTCGACCCTCCACCACCTCCAA
ACCCTCCTCCCACCTATATCCTCCCCCACTCAATCCTCCAGAATAACCCT
CCACCCCGAAACCGTCGACCTCTCCTCCCTCCCCTCCGTCCGCGCCCTCT
CCCAGCGACTCACAACCACCATCCCTAAACTCGACTCCATCGTCCTCAAC
GCCGGCATCGGCGGCTGGACAGGGATCGACTGGCCGCGCGCAATCTGGGG
AACCCTCACAGACCTCGTACATAGTGTGTCATGGTTCGCGCACAAGATAG
CCCCCGTGGGGATGATCACCCCTCCTCAAACTACACAGCCTTCGGAGCCG
CGGCTGGGAAGCGTCTTCACGGCGAACGTATTCGGACACTACATGCTCTC
GCATAACGTCATGGGCCTGCTGCGGAAATCCACCCAGCCGGGACGAGTAA
TCTGGGTATCGAGTATCGAGGCCACCGTGAACCATTTCAATGTCGATGAT
ATCCAGGGACTGAGGACGAAGGTGCCTTATGAGAGTTCGAAGACACTTAC
GGATATTCTCGCGCTCACGGCCGAATGGCCGAACTCGCACAAGATGATCT
ACAGAATCAATTCTACGTACTAGTAACCGGCGCAAACAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_5865CAN33_5865Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5865-T1CAN33_5865-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5865-T1.cdsCAN33_5865-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5865-T1.exon3CAN33_5865-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_5865-T1.exon2CAN33_5865-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_5865-T1.exon1CAN33_5865-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09262SR7
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1299587..1300973 -
Powered by Drupal