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CAN33_5875-T1, CAN33_5875-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5875-T1
Unique NameCAN33_5875-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1311643..1312686+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5875-T1 ID=CAN33_5875-T1|Name=CAN33_5875-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1044bp|location=Sequence derived from alignment at NKJJ01000019.1:1311643..1312686+ (Aspergillus niger FDAARGOS_311)
ATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGGAGCATTGCAA
CAAGGTATGGATCGACTCGATGCCGCGTTATCTACACCTTCCGCTGCTCT
ATCGCTTGCTTGAGGGTGTTATAGTTCCTGTGCTAATGGCAGTAGTCCTT
CAATCGCAAATCAGATCTGTGCAGGCACTATCGGATACACACCAATGAGC
GACCGTATCATTGCACGGTCAAGGACTGCAATAAAAGCTTCATTCAACGG
AGTGCATTGACAGTGCATTCGCGAACGCATACCGGAGAGAAGCCTCATGT
CTGTGATCACAGAGGATGCCACAAGGCCTTTTCTGACGTATGTGCATCCT
AGCTCACTAATCTTTATGTATGCTGACCACCACAGTCATCGAGTCTCGCT
CGTCACCGAAGGATCCATACTGGAAAGAGGCCCTATATCTGCCAAGAGCC
AACATGCGAACGAGCGTAAGCATTGGCCTGGTTCTCGTGCTAATCTCTTA
TCTAACAACGTGAAGCTTCTGCCGCAAAACGACCTTGACCAAGCACCAAC
ACCGCTCTCACCCCCCGGGATCCATGACTCGCCTGCCCTCCGAAGATGCG
GTCTCTGAACACTCGTATCAAGGGCCAGTCGCCGTTCCCGTGCCGAATGA
ACAGTATCTCTTAGCCCAGCAACCCTACTACCCTCATACTCCGACGCCGA
CTCATGAGTTTTACCCCCACCAGAGCCTACACATAACGCCGGTGCCCATA
CAAGAACAACCACCGATCGTGACCCAGCACATCCCTGTCACGTCACCGGT
TGATGTGCAGCGTGCTCAGCAACACTACATGCAGCTTGTGCAGCAACAGC
AACAGCAACAGCAGCGGTACGATCCTGGTCGGCAGGGGTATCTGCCACCG
GAGTTTCAGCAACCATACCATGCTCTACCCACAGCGGATGGTCCACCGCT
GATGGTGACTAGCACTCAGAGTGACTACAAACCGCCGGCCCGCATCCTGA
ACCAGCCCGAGGGAACGGACTGGGGCTTCCTGGGGGTTGGCTAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1311643..1312686+

>CAN33_5875-T1 ID=CAN33_5875-T1|Name=CAN33_5875-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3450bp|location=Sequence derived from alignment at NKJJ01000019.1:1311643..1312686+ (Aspergillus niger FDAARGOS_311)
ATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGGAGCATTGCAA
CAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGCACTATCGGATACACA
CCAATGAGCGACCGTATCATTGCACGGTCAAGGACTGCAATAAAAGCTTC
ATTCAACGGAGTGCATTGACAGTGCATTCGCGAACGCATACCGGAGAGAA
GCCTCATGTCTGTGATCACAGAGGATGCCACAAGGCCTTTTCTGACTCAT
CGAGTCTCGCTCGTCACCGAAGGATCCATACTGGAAAGAGGCCCTATATC
TGCCAAGAGCCAACATGCGAACGAGCCTTCTGCCGCAAAACGACCTTGAC
CAAGCACCAACACCGCTCTCACCCCCCGGGATCCATGACTCGCCTGCCCT
CCGAAGATGCGGTCTCTGAACACTCGTATCAAGGGCCAGTCGCCGTTCCC
GTGCCGAATGAACAGTATCTCTTAGCCCAGCAACCCTACTACCCTCATAC
TCCGACGCCGACTCATGAGTTTTACCCCCACCAGAGCCTACACATAACGC
CGGTGCCCATACAAGAACAACCACCGATCGTGACCCAGCACATCCCTGTC
ACGTCACCGGTTGATAGTGACTACAAACCGCCGGCCCGCATCCTGAACCA
GCCCGAGGGAACGGACTGGGGCTTCCTGGGGGTTGGCTAAATGGCGCCTG
GTGGTGGACGAGATTTTAACTGCACCTGGGAGCATTGCAACAAGTCCTTC
AATCGCAAATCAGATCTGTGCAGGCACTATCGGATACACACCAATGAGCG
ACCGTATCATTGCACGGTCAAGGACTGCAATAAAAGCTTCATTCAACGGA
GTGCATTGACAGTGCATTCGCGAACGCATACCGGAGAGAAGCCTCATGTC
TGTGATCACAGAGGATGCCACAAGGCCTTTTCTGACTCATCGAGTCTCGC
TCGTCACCGAAGGATCCATACTGGAAAGAGGCCCTATATCTGCCAAGAGC
CAACATGCGAACGAGCCTTCTGCCGCAAAACGACCTTGACCAAGCACCAA
CACCGCTCTCACCCCCCGGGATCCATGACTCGCCTGCCCTCCGAAGATGC
GGTCTCTGAACACTCGTATCAAGGGCCAGTCGCCGTTCCCGTGCCGAATG
AACAGTATCTCTTAGCCCAGCAACCCTACTACCCTCATACTCCGACGCCG
ACTCATGAGTTTTACCCCCACCAGAGCCTACACATAACGCCGGTGCCCAT
ACAAGAACAACCACCGATCGTGACCCAGCACATCCCTGTCACGTCACCGG
TTGATAGTGACTACAAACCGCCGGCCCGCATCCTGAACCAGCCCGAGGGA
ACGGACTGGGGCTTCCTGGGGGTTGGCTAAATGGCGCCTGGTGGTGGACG
AGATTTTAACTGCACCTGGGAGCATTGCAACAAGTCCTTCAATCGCAAAT
CAGATCTGTGCAGGCACTATCGGATACACACCAATGAGCGACCGTATCAT
TGCACGGTCAAGGACTGCAATAAAAGCTTCATTCAACGGAGTGCATTGAC
AGTGCATTCGCGAACGCATACCGGAGAGAAGCCTCATGTCTGTGATCACA
GAGGATGCCACAAGGCCTTTTCTGACTCATCGAGTCTCGCTCGTCACCGA
AGGATCCATACTGGAAAGAGGCCCTATATCTGCCAAGAGCCAACATGCGA
ACGAGCCTTCTGCCGCAAAACGACCTTGACCAAGCACCAACACCGCTCTC
ACCCCCCGGGATCCATGACTCGCCTGCCCTCCGAAGATGCGGTCTCTGAA
CACTCGTATCAAGGGCCAGTCGCCGTTCCCGTGCCGAATGAACAGTATCT
CTTAGCCCAGCAACCCTACTACCCTCATACTCCGACGCCGACTCATGAGT
TTTACCCCCACCAGAGCCTACACATAACGCCGGTGCCCATACAAGAACAA
CCACCGATCGTGACCCAGCACATCCCTGTCACGTCACCGGTTGATAGTGA
CTACAAACCGCCGGCCCGCATCCTGAACCAGCCCGAGGGAACGGACTGGG
GCTTCCTGGGGGTTGGCTAAATGGCGCCTGGTGGTGGACGAGATTTTAAC
TGCACCTGGGAGCATTGCAACAAGTCCTTCAATCGCAAATCAGATCTGTG
CAGGCACTATCGGATACACACCAATGAGCGACCGTATCATTGCACGGTCA
AGGACTGCAATAAAAGCTTCATTCAACGGAGTGCATTGACAGTGCATTCG
CGAACGCATACCGGAGAGAAGCCTCATGTCTGTGATCACAGAGGATGCCA
CAAGGCCTTTTCTGACTCATCGAGTCTCGCTCGTCACCGAAGGATCCATA
CTGGAAAGAGGCCCTATATCTGCCAAGAGCCAACATGCGAACGAGCCTTC
TGCCGCAAAACGACCTTGACCAAGCACCAACACCGCTCTCACCCCCCGGG
ATCCATGACTCGCCTGCCCTCCGAAGATGCGGTCTCTGAACACTCGTATC
AAGGGCCAGTCGCCGTTCCCGTGCCGAATGAACAGTATCTCTTAGCCCAG
CAACCCTACTACCCTCATACTCCGACGCCGACTCATGAGTTTTACCCCCA
CCAGAGCCTACACATAACGCCGGTGCCCATACAAGAACAACCACCGATCG
TGACCCAGCACATCCCTGTCACGTCACCGGTTGATAGTGACTACAAACCG
CCGGCCCGCATCCTGAACCAGCCCGAGGGAACGGACTGGGGCTTCCTGGG
GGTTGGCTAAATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGG
AGCATTGCAACAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGCACTAT
CGGATACACACCAATGAGCGACCGTATCATTGCACGGTCAAGGACTGCAA
TAAAAGCTTCATTCAACGGAGTGCATTGACAGTGCATTCGCGAACGCATA
CCGGAGAGAAGCCTCATGTCTGTGATCACAGAGGATGCCACAAGGCCTTT
TCTGACTCATCGAGTCTCGCTCGTCACCGAAGGATCCATACTGGAAAGAG
GCCCTATATCTGCCAAGAGCCAACATGCGAACGAGCCTTCTGCCGCAAAA
CGACCTTGACCAAGCACCAACACCGCTCTCACCCCCCGGGATCCATGACT
CGCCTGCCCTCCGAAGATGCGGTCTCTGAACACTCGTATCAAGGGCCAGT
CGCCGTTCCCGTGCCGAATGAACAGTATCTCTTAGCCCAGCAACCCTACT
ACCCTCATACTCCGACGCCGACTCATGAGTTTTACCCCCACCAGAGCCTA
CACATAACGCCGGTGCCCATACAAGAACAACCACCGATCGTGACCCAGCA
CATCCCTGTCACGTCACCGGTTGATAGTGACTACAAACCGCCGGCCCGCA
TCCTGAACCAGCCCGAGGGAACGGACTGGGGCTTCCTGGGGGTTGGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_5875CAN33_5875Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5875-T1CAN33_5875-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5875-T1.exon1CAN33_5875-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_5875-T1.exon2CAN33_5875-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_5875-T1.exon3CAN33_5875-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_5875-T1.exon4CAN33_5875-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_5875-T1.exon5CAN33_5875-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5875-T1.cdsCAN33_5875-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
ProductZinc-finger double domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1311643..1312686 +
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