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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1336519..1337491+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5910-T1 ID=CAN33_5910-T1|Name=CAN33_5910-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=973bp|location=Sequence derived from alignment at NKJJ01000019.1:1336519..1337491+ (Aspergillus niger FDAARGOS_311)
ATGGCGAGGGACACCGCGCAAACTCCGATCATCCCTCGTCCCCGGCTGCT
TCAGGGCGCCGCCAGTTATCCCTCCGATCTCACCGCCCCCTCGCTGTCTG
CGCCCTTCAAGCTCGACGAGGGTTATTCCGATGAAACGAGAAGCCAGCCC
GACAAGGAGTTTTTGAATTCGCCCCCCGATGATGTGATGCCGCTCCCCGA
CTGGGTTAATGCTTATAGTGAGGCCGAGCGAGCCGGTGAGTTCAGCCCCC
CTTCCCTTGGTCCCGTCCGGCGCAAGGCTCCTCTTCTGTTTGGCTTCTTT
AGCGCGATCATCATCGTACTGACAGGCTGTGGTGTTTCATGTAGAGCTCG
CCTACAAGCTTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGGTGGTT
GAAAAGCTAGCGCCTCTATTGCACATGGATCCCGTGCTGAAATTACCTCC
GGAGATCACCGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTTGGTAA
CGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACACCCGC
CTTTGGAGAGACTTATATATCAGCGAAGGCTGGCGGGTCGACATTGACGC
CGTGCATACGTACGAACAGGAACACTCGGGATTGGAATCCCCCCAGCTCC
GAAAATCTCGGTTGAGGCATATAGACCCGGATCTCGGTGAACCGAAACAG
AAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGATCACT
GGATAACAATGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGCAGCGG
CGGATATTGAAGGCGATCATCCCATGAGTGATGCGTCAAACGATCGAGGA
CCGGCGATCGCACCTGGGCAACAATCATCTAGCGCCCGCCATGAGTCGTC
AGGAACTGCCCAATCGAAGTCACATTTGCAGCAAATTTCTACGAACTCTA
GCCCCCCAAATCGCCACTATTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1336519..1337491+ >CAN33_5910-T1 ID=CAN33_5910-T1|Name=CAN33_5910-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1728bp|location=Sequence derived from alignment at NKJJ01000019.1:1336519..1337491+ (Aspergillus niger FDAARGOS_311)
ATGGCGAGGGACACCGCGCAAACTCCGATCATCCCTCGTCCCCGGCTGCT
TCAGGGCGCCGCCAGTTATCCCTCCGATCTCACCGCCCCCTCGCTGTCTG
CGCCCTTCAAGCTCGACGAGGGTTATTCCGATGAAACGAGAAGCCAGCCC
GACAAGGAGTTTTTGAATTCGCCCCCCGATGATGTGATGCCGCTCCCCGA
CTGGGTTAATGCTTATAGTGAGGCCGAGCGAGCCGAGCTCGCCTACAAGC
TTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGGTGGTTGAAAAGCTA
GCGCCTCTATTGCACATGGATCCCGTGCTGAAATTACCTCCGGAGATCAC
CGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTTGGTAACGGCTTCCT
TGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACACCCGCCTTTGGAGA
GACTTATATATCAGCGAAGGCTGGCGGGTCGACATTGACGCCGTGCATAC
GTACGAACAGGAACACTCGGGATTGGAATCCCCCCAGCTCCGAAAATCTC
GGTTGAGGCATATAGACCCGGATCTCGGTGAACCGAAACAGAAGAAGCGC
GTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGATCACTGGATAACAA
TGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGCAGCGGCGGATATTG
AAGGCGATCATCCCATGAGTGATGCGTCAAACGATCGAGGACCGGCGATC
GCACCTGGGCAACAATCATCTAGCGCCCGCCATGAGTCGTCAGGAACTGC
CCAATCGAAGTCACATTTGCAGCAAATTTCTACGAACTCTAGCCCCCCAA
ATCGCCACTATTAAATGGCGAGGGACACCGCGCAAACTCCGATCATCCCT
CGTCCCCGGCTGCTTCAGGGCGCCGCCAGTTATCCCTCCGATCTCACCGC
CCCCTCGCTGTCTGCGCCCTTCAAGCTCGACGAGGGTTATTCCGATGAAA
CGAGAAGCCAGCCCGACAAGGAGTTTTTGAATTCGCCCCCCGATGATGTG
ATGCCGCTCCCCGACTGGGTTAATGCTTATAGTGAGGCCGAGCGAGCCGA
GCTCGCCTACAAGCTTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGG
TGGTTGAAAAGCTAGCGCCTCTATTGCACATGGATCCCGTGCTGAAATTA
CCTCCGGAGATCACCGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTT
GGTAACGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACA
CCCGCCTTTGGAGAGACTTATATATCAGCGAAGGCTGGCGGGTCGACATT
GACGCCGTGCATACGTACGAACAGGAACACTCGGGATTGGAATCCCCCCA
GCTCCGAAAATCTCGGTTGAGGCATATAGACCCGGATCTCGGTGAACCGA
AACAGAAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGA
TCACTGGATAACAATGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGC
AGCGGCGGATATTGAAGGCGATCATCCCATGAGTGATGCGTCAAACGATC
GAGGACCGGCGATCGCACCTGGGCAACAATCATCTAGCGCCCGCCATGAG
TCGTCAGGAACTGCCCAATCGAAGTCACATTTGCAGCAAATTTCTACGAA
CTCTAGCCCCCCAAATCGCCACTATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | F-box-like family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1336519..1337491 + |
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