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CAN33_6040-T1, CAN33_6040-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6040-T1
Unique NameCAN33_6040-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1416418..1418013+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6040-T1 ID=CAN33_6040-T1|Name=CAN33_6040-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1596bp|location=Sequence derived from alignment at NKJJ01000019.1:1416418..1418013+ (Aspergillus niger FDAARGOS_311)
ATGGTGTCTTGTCCCATCTGCAGCCAGTCCGTCTCGTCCCTAAAGATTAA
CGACCACATCGATTCCGACTGCCAGAACTTTATCGAAGAGCCGCCCAGCT
CGGGGGAGACTCCCGCCACTCAGAAAGCTCCGGTTCCCAGCTTCTTCCAG
CCAGCCTCTGCTAAGAAAGCTTCTGCCCAGTCTGCTCAGGCAAATGGACA
GCGAGATCAAAATGTGACTTCCTCCCCACTGCGCAATGTCAACGGCAAAC
GGGCGACGCCGCACGATGCCAACTCATCGGAGGTATACGAGAGATCCGGG
CCCAGCCAACCGTCGAGCGAACCAAAGAAGCCAAAAGTTAGCGCCTTGCA
AAAGGCTGCGCCTTTACCGGAACGCATGCGTCCTCGGACTCTTGACGATG
TCTGCGGACAAGAGCTTGTAGGGCCAAACGGAGTGCTTCGGGGCTTGATT
GAGCAAGATCGGGTTCCGAGTATGATTCTTTGGGGTGGTCCAGGAACAGG
AAAAACAACCATTGCTCGCGTGATTGCTTCGATGGTTGGTAGCCGCTTCG
TTGAGATCAACAGTACCAGTTCGGGAGTTGCGGAGTGCAAGAAAATCTTC
TCCGATGCGAAAAGTGAGCTCGGTCTGACGGGACGGAAGACCATCATTTT
CTGTGACGAGATTCATCGATTCTCCAAGTCTCAACAAGACGTATTTCTGG
GACCAGTAGAAAGTGGGCAGGTAACGCTTATTGGTGCTACCACGGAGAAC
CCTTCTTTCAAGGTGCAGAACGCTCTGCTGTCCCGGTGTCGGACTTTTAC
TCTTTCCAAACTTACAGACGAAGATATCAAATCGATCCTTCATCGAGCAC
TACGGCTGGAGGGGCCGAACTATTCGCCTTCGGAATTGGTCGATGAAGAA
TTGATTGATTACTTGGCCAGGTTCGCCGATGGCGACGCGCGGACGTCCCT
TAATCTTCTAGAGCTCGCCATGGATCTGTCGAAACGGCCTGGAATGACCA
AGGATGAGATCAAGCGGTCATTGACTAAGACCCTTGTCTATGATCGGGCC
GGGGATCAACACTACGATACCATTTCCGCTTTTCACAAATCCATCCGGGG
GAGCGATCCGGATGCGGCGCTTTACTATCTTGCTCGCATGATCCAGTCGG
GAGAAGACCCCCTCTATATCGCTCGACGTCTCATCGTCGTCGCTTCGGAG
GACATTGGGCTTGCGGACAACAGCATGCTCACGCTAGCCATCTCGACCCA
CGCGGCTGTGGAAAAGATCGGCCTACCGGAGGCACGGATCAATCTGGCAC
ATGCGACCGTTGCCATGGCACTCTCAAAGAAGAGCACGCGGTCGTACCGC
GGCCTGAACAATGCATTTGCTGCGCTAGCAGAGCCCGGCGTTGCTGGGCT
GCCTGTTCCGATCCATCTGCGCAATGCGCCGACTCGGTTGATGAAGGAGC
TCGGATACGGCAAGGAATACAAGTATAATCCTAACTATGTCGACGGGGAG
GTCGTCCAGGACTATCTCCCGGAAAAGATTTTGGGACGGAAGTTCTTGGA
GGATCACGATCTAGGACATCAGGTGGACCCAGATCTCATGAGGTAG
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1416418..1418013+

>CAN33_6040-T1 ID=CAN33_6040-T1|Name=CAN33_6040-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1596bp|location=Sequence derived from alignment at NKJJ01000019.1:1416418..1418013+ (Aspergillus niger FDAARGOS_311)
ATGGTGTCTTGTCCCATCTGCAGCCAGTCCGTCTCGTCCCTAAAGATTAA
CGACCACATCGATTCCGACTGCCAGAACTTTATCGAAGAGCCGCCCAGCT
CGGGGGAGACTCCCGCCACTCAGAAAGCTCCGGTTCCCAGCTTCTTCCAG
CCAGCCTCTGCTAAGAAAGCTTCTGCCCAGTCTGCTCAGGCAAATGGACA
GCGAGATCAAAATGTGACTTCCTCCCCACTGCGCAATGTCAACGGCAAAC
GGGCGACGCCGCACGATGCCAACTCATCGGAGGTATACGAGAGATCCGGG
CCCAGCCAACCGTCGAGCGAACCAAAGAAGCCAAAAGTTAGCGCCTTGCA
AAAGGCTGCGCCTTTACCGGAACGCATGCGTCCTCGGACTCTTGACGATG
TCTGCGGACAAGAGCTTGTAGGGCCAAACGGAGTGCTTCGGGGCTTGATT
GAGCAAGATCGGGTTCCGAGTATGATTCTTTGGGGTGGTCCAGGAACAGG
AAAAACAACCATTGCTCGCGTGATTGCTTCGATGGTTGGTAGCCGCTTCG
TTGAGATCAACAGTACCAGTTCGGGAGTTGCGGAGTGCAAGAAAATCTTC
TCCGATGCGAAAAGTGAGCTCGGTCTGACGGGACGGAAGACCATCATTTT
CTGTGACGAGATTCATCGATTCTCCAAGTCTCAACAAGACGTATTTCTGG
GACCAGTAGAAAGTGGGCAGGTAACGCTTATTGGTGCTACCACGGAGAAC
CCTTCTTTCAAGGTGCAGAACGCTCTGCTGTCCCGGTGTCGGACTTTTAC
TCTTTCCAAACTTACAGACGAAGATATCAAATCGATCCTTCATCGAGCAC
TACGGCTGGAGGGGCCGAACTATTCGCCTTCGGAATTGGTCGATGAAGAA
TTGATTGATTACTTGGCCAGGTTCGCCGATGGCGACGCGCGGACGTCCCT
TAATCTTCTAGAGCTCGCCATGGATCTGTCGAAACGGCCTGGAATGACCA
AGGATGAGATCAAGCGGTCATTGACTAAGACCCTTGTCTATGATCGGGCC
GGGGATCAACACTACGATACCATTTCCGCTTTTCACAAATCCATCCGGGG
GAGCGATCCGGATGCGGCGCTTTACTATCTTGCTCGCATGATCCAGTCGG
GAGAAGACCCCCTCTATATCGCTCGACGTCTCATCGTCGTCGCTTCGGAG
GACATTGGGCTTGCGGACAACAGCATGCTCACGCTAGCCATCTCGACCCA
CGCGGCTGTGGAAAAGATCGGCCTACCGGAGGCACGGATCAATCTGGCAC
ATGCGACCGTTGCCATGGCACTCTCAAAGAAGAGCACGCGGTCGTACCGC
GGCCTGAACAATGCATTTGCTGCGCTAGCAGAGCCCGGCGTTGCTGGGCT
GCCTGTTCCGATCCATCTGCGCAATGCGCCGACTCGGTTGATGAAGGAGC
TCGGATACGGCAAGGAATACAAGTATAATCCTAACTATGTCGACGGGGAG
GTCGTCCAGGACTATCTCCCGGAAAAGATTTTGGGACGGAAGTTCTTGGA
GGATCACGATCTAGGACATCAGGTGGACCCAGATCTCATGAGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6040CAN33_6040Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6040-T1.exon1CAN33_6040-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6040-T1.cdsCAN33_6040-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6040-T1CAN33_6040-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261W2O
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR032423
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR021886
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR006642
DBxrefPFAM:PF05496
DBxrefPFAM:PF12002
DBxrefPFAM:PF16193
DBxrefPFAM:PF07726
DBxrefPFAM:PF00004
ProductMgsA AAA ATPase C terminal family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1416418..1418013 +
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