You are here

Home

CAN33_6060-T1, CAN33_6060-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6060-T1
Unique NameCAN33_6060-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1427470..1428654+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6060-T1 ID=CAN33_6060-T1|Name=CAN33_6060-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1185bp|location=Sequence derived from alignment at NKJJ01000019.1:1427470..1428654+ (Aspergillus niger FDAARGOS_311)
ATGCTCGCAACCCCCATGACCCCGCAAGCTTCCCACCCTTCGTCCTCCAA
CATGGTCTGCAGTCTAGCCTCGACTACGACCACCACCTCCTCTTCTTCCT
CCTCCTCATCATCATCCTCCTCCTCCAGTGCCACACAACAGACTACGATA
TCGTCCCGACCGAAACTGACTCTCCAAACCACCTCTCTTCCCCGAACCTT
TGGCACATCCTCAACGGGGTTGTCCCTCTCTATTGCAGCCGGAACGGCAT
CTCCCACTGTCCGCAATACCTTCAAAAATGCCTACGAGGTCACCGGCCCT
TCATCTGCCACCGCCTCTCCGTCATCGAAACACCCGTCCAACCTCCGCTT
TAGCAAACCTTCCTCTCCATTCACCACACACAACCCATACCAACTCCCAC
TGGGGGTGAAGAGTATTTTGCGAAACTCGCCGCTCGAGCCGACCTGCCGC
CGACGGGCTGGATCGGTGGCCACCACCGGGCCGAATGGTGGACCGAGCGC
ACGCCGCGTCTTCTTTCCCGCCAAGAAGCAGGTCAGCTATCGCAACCCTT
TGGAAGAGGAAATCCAGACCGTGCACTACACGGCACGCCACTCTGATCTA
CACGACGACCCCGAACCTGCACTTGAGCCTCAATCTCAACCCCAGCAACC
AGAGGTGACCTCATCAGACGAGGACTCGGATTCGAACGCCAGCGGGTGTC
CCTCGGACACCAGCACTTCTGAAGATGAACCCGAGACCGGCTTAGGGAAG
ACGACATCGTCTCCCATTAAGCGGAAGAAGCGCAAGCATTCGAATGCCGA
GAGGCAAGTCCGGGCGGTGGCCTTGATGGATGGAATCGCGGGACCCAGCA
ATCCGGACAGCCTGACACCGCAAACGCCGCGCAGGAAGCGAGCTAAACGT
CGCTGCGAGTGGCGATGGACCCTGGGCCCGTTAGAGAATCGTGACAAACT
GCTTCACCCCGTCCAGGATGAGACGGGTCCAACATCATCCGCGTCCCAGC
CTGAAACGATACCACACGAGTCCGAAACGGAGACTCCGTCCTCCGACCCT
CCGCTGTCCAGCGCCAGTACCACACTCTACCACTCCAGCCCCAGTTCATC
TGTCTCGTCGGATGTGGAAACGGAAAATGATGAGTGGCAGACACACACGA
CCCACGAACTTGAATGCGCACATGCCGATCAATGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:1427470..1428654+

>CAN33_6060-T1 ID=CAN33_6060-T1|Name=CAN33_6060-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2196bp|location=Sequence derived from alignment at NKJJ01000019.1:1427470..1428654+ (Aspergillus niger FDAARGOS_311)
ATGCTCGCAACCCCCATGACCCCGCAAGCTTCCCACCCTTCGTCCTCCAA
CATGACTACGATATCGTCCCGACCGAAACTGACTCTCCAAACCACCTCTC
TTCCCCGAACCTTTGGCACATCCTCAACGGGGTTGTCCCTCTCTATTGCA
GCCGGAACGGCATCTCCCACTGTCCGCAATACCTTCAAAAATGCCTACGA
GGTCACCGGCCCTTCATCTGCCACCGCCTCTCCGTCATCGAAACACCCGT
CCAACCTCCGCTTTAGCAAACCTTCCTCTCCATTCACCACACACAACCCA
TACCAACTCCCACTGGGGGTGAAGAGTATTTTGCGAAACTCGCCGCTCGA
GCCGACCTGCCGCCGACGGGCTGGATCGGTGGCCACCACCGGGCCGAATG
GTGGACCGAGCGCACGCCGCGTCTTCTTTCCCGCCAAGAAGCAGGTCAGC
TATCGCAACCCTTTGGAAGAGGAAATCCAGACCGTGCACTACACGGCACG
CCACTCTGATCTACACGACGACCCCGAACCTGCACTTGAGCCTCAATCTC
AACCCCAGCAACCAGAGGTGACCTCATCAGACGAGGACTCGGATTCGAAC
GCCAGCGGGTGTCCCTCGGACACCAGCACTTCTGAAGATGAACCCGAGAC
CGGCTTAGGGAAGACGACATCGTCTCCCATTAAGCGGAAGAAGCGCAAGC
ATTCGAATGCCGAGAGGCAAGTCCGGGCGGTGGCCTTGATGGATGGAATC
GCGGGACCCAGCAATCCGGACAGCCTGACACCGCAAACGCCGCGCAGGAA
GCGAGCTAAACGTCGCTGCGAGTGGCGATGGACCCTGGGCCCGTTAGAGA
ATCGTGACAAACTGCTTCACCCCGTCCAGGATGAGACGGGTCCAACATCA
TCCGCGTCCCAGCCTGAAACGATACCACACGAGTCCGAAACGGAGACTCC
GTCCTCCGACCCTCCGCTGTCCAGCGCCAGTACCACACTCTACCACTCCA
GCCCCAGTTCATCTGTCTCGTCGGATGTGGAAACGGAAAATGATGAGTGG
CAGACACACACGACCCACGAACTTGAATGCGCACATGCCGATCAATGAAT
GCTCGCAACCCCCATGACCCCGCAAGCTTCCCACCCTTCGTCCTCCAACA
TGACTACGATATCGTCCCGACCGAAACTGACTCTCCAAACCACCTCTCTT
CCCCGAACCTTTGGCACATCCTCAACGGGGTTGTCCCTCTCTATTGCAGC
CGGAACGGCATCTCCCACTGTCCGCAATACCTTCAAAAATGCCTACGAGG
TCACCGGCCCTTCATCTGCCACCGCCTCTCCGTCATCGAAACACCCGTCC
AACCTCCGCTTTAGCAAACCTTCCTCTCCATTCACCACACACAACCCATA
CCAACTCCCACTGGGGGTGAAGAGTATTTTGCGAAACTCGCCGCTCGAGC
CGACCTGCCGCCGACGGGCTGGATCGGTGGCCACCACCGGGCCGAATGGT
GGACCGAGCGCACGCCGCGTCTTCTTTCCCGCCAAGAAGCAGGTCAGCTA
TCGCAACCCTTTGGAAGAGGAAATCCAGACCGTGCACTACACGGCACGCC
ACTCTGATCTACACGACGACCCCGAACCTGCACTTGAGCCTCAATCTCAA
CCCCAGCAACCAGAGGTGACCTCATCAGACGAGGACTCGGATTCGAACGC
CAGCGGGTGTCCCTCGGACACCAGCACTTCTGAAGATGAACCCGAGACCG
GCTTAGGGAAGACGACATCGTCTCCCATTAAGCGGAAGAAGCGCAAGCAT
TCGAATGCCGAGAGGCAAGTCCGGGCGGTGGCCTTGATGGATGGAATCGC
GGGACCCAGCAATCCGGACAGCCTGACACCGCAAACGCCGCGCAGGAAGC
GAGCTAAACGTCGCTGCGAGTGGCGATGGACCCTGGGCCCGTTAGAGAAT
CGTGACAAACTGCTTCACCCCGTCCAGGATGAGACGGGTCCAACATCATC
CGCGTCCCAGCCTGAAACGATACCACACGAGTCCGAAACGGAGACTCCGT
CCTCCGACCCTCCGCTGTCCAGCGCCAGTACCACACTCTACCACTCCAGC
CCCAGTTCATCTGTCTCGTCGGATGTGGAAACGGAAAATGATGAGTGGCA
GACACACACGACCCACGAACTTGAATGCGCACATGCCGATCAATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6060CAN33_6060Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6060-T1.exon1CAN33_6060-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_6060-T1.exon2CAN33_6060-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6060-T1.cdsCAN33_6060-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6060-T1CAN33_6060-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000191.5
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1427470..1428654 +
Powered by Drupal