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CAN33_6180-T1, CAN33_6180-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6180-T1
Unique NameCAN33_6180-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1518303..1519561+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6180-T1 ID=CAN33_6180-T1|Name=CAN33_6180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1259bp|location=Sequence derived from alignment at NKJJ01000019.1:1518303..1519561+ (Aspergillus niger FDAARGOS_311)
ATGAAGCTCAACATCTCCTACCCGGCCAATGGGTCTCAGAAGATCATCGA
GGTTGACGATGAGCGCAAGCTCCGTCCCTTCATGGAGAAGCGCATGGGAA
CCGAAGTCAGCAACCCTCCCCCTTGGATATCCGCACCCGAAAACACCACA
TTTGGAAAAGAAAAAGAGACGAAATTTGAGAAATACACGAAAAATATGGG
AAAAGCAGAAGACTGATTGGGGTTTCTTTTTTGCTATAGGTTGCCGGCGA
CTCTCTCGGTGACGAGTTCAAGGGTTACATCCTCAAGATCACCGGTGGTA
ACGACAAGCAAGGTACGACTGGATTGCTTTCCCCCTTTTCGGATTTGGGC
TCGACTAGGAGGACTCGAAAACGAACAAGAAATTGGATATCATGGTTAAG
AATGTACATTGGATGCTGACTTTGGCTTCTTCTCAGGTTTCCCCATGAAG
CAGGGTGGTATGTACCGACCGACGCAAATATAATCCGACAATCACAAAAA
CAGCAGAAACTCATCGATTTGTGTGCAGTTCTCCTCCCCACCCGTACCCG
CCTCCTCCTTGCCGATGGCCACAGGTAAATGCGACCTGCCGATAATGGAG
TTTACGAAATGGAAGACTGATGTCCACTGCAGCTGCTACCGCCCCCGCCG
CACTGGTGAGCGCAAGCGCAAGTCCGTCCGTGGTGGTAGGTTACCAAACA
ACAATATATCCGTTACTATCGTGGTTAGGAGTTGATTCGTTGACGCTTCG
TGTTTACAGCCATCACCGGTCAGGACCTCTCTGTTCTTGCCCTGAGCATC
GTCAAGCAGGGTGAGGGTGAGCTCCCCGGTCTCACCGACACCGTTGTCCC
CAAGAGACTCGGCCCCAAGCGTGCCACCAAGATCCGCCGCTTCTTCGGTC
TCGACAAGAAGGACGACGTCCGCAAGTTCGTCATCCGTCGTACCGTCACC
CGTGAGGGCAAGCCCGACTACACCAAGGCCCCCAAGATCCAGCGTCTGGT
TACTCCCCAGCGTCTCCAGCGCAAGCGCCAGCGCATTGCCCTCAAGCGCC
GTCGTGCTGAGGCTGCCCGCGAGGCTGCGTAAGTTGCACCCTTTCCTCTC
TCTCGGCGGGGACATGTGCCCAAATACATCAAATGATTATCCGCTAACCG
TGCGATCCACAGTAACGACTACGCCAAGCTCCTTGCCAGCCGTGTCCACG
AGGAGAAGGCCAAGCGTGATGAGCTCCGCAAGCGGAGAGCGTCTTCGATG
AGGAAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1518303..1519561+

>CAN33_6180-T1 ID=CAN33_6180-T1|Name=CAN33_6180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4998bp|location=Sequence derived from alignment at NKJJ01000019.1:1518303..1519561+ (Aspergillus niger FDAARGOS_311)
ATGAAGCTCAACATCTCCTACCCGGCCAATGGGTCTCAGAAGATCATCGA
GGTTGACGATGAGCGCAAGCTCCGTCCCTTCATGGAGAAGCGCATGGGAA
CCGAAGTTGCCGGCGACTCTCTCGGTGACGAGTTCAAGGGTTACATCCTC
AAGATCACCGGTGGTAACGACAAGCAAGGTTTCCCCATGAAGCAGGGTGT
TCTCCTCCCCACCCGTACCCGCCTCCTCCTTGCCGATGGCCACAGCTGCT
ACCGCCCCCGCCGCACTGGTGAGCGCAAGCGCAAGTCCGTCCGTGGTGCC
ATCACCGGTCAGGACCTCTCTGTTCTTGCCCTGAGCATCGTCAAGCAGGG
TGAGGGTGAGCTCCCCGGTCTCACCGACACCGTTGTCCCCAAGAGACTCG
GCCCCAAGCGTGCCACCAAGATCCGCCGCTTCTTCGGTCTCGACAAGAAG
GACGACGTCCGCAAGTTCGTCATCCGTCGTACCGTCACCCGTGAGGGCAA
GCCCGACTACACCAAGGCCCCCAAGATCCAGCGTCTGGTTACTCCCCAGC
GTCTCCAGCGCAAGCGCCAGCGCATTGCCCTCAAGCGCCGTCGTGCTGAG
GCTGCCCGCGAGGCTGCTAACGACTACGCCAAGCTCCTTGCCAGCCGTGT
CCACGAGGAGAAGGCCAAGCGTGATGAGCTCCGCAAGCGGAGAGCGTCTT
CGATGAGGAAGTAAATGAAGCTCAACATCTCCTACCCGGCCAATGGGTCT
CAGAAGATCATCGAGGTTGACGATGAGCGCAAGCTCCGTCCCTTCATGGA
GAAGCGCATGGGAACCGAAGTTGCCGGCGACTCTCTCGGTGACGAGTTCA
AGGGTTACATCCTCAAGATCACCGGTGGTAACGACAAGCAAGGTTTCCCC
ATGAAGCAGGGTGTTCTCCTCCCCACCCGTACCCGCCTCCTCCTTGCCGA
TGGCCACAGCTGCTACCGCCCCCGCCGCACTGGTGAGCGCAAGCGCAAGT
CCGTCCGTGGTGCCATCACCGGTCAGGACCTCTCTGTTCTTGCCCTGAGC
ATCGTCAAGCAGGGTGAGGGTGAGCTCCCCGGTCTCACCGACACCGTTGT
CCCCAAGAGACTCGGCCCCAAGCGTGCCACCAAGATCCGCCGCTTCTTCG
GTCTCGACAAGAAGGACGACGTCCGCAAGTTCGTCATCCGTCGTACCGTC
ACCCGTGAGGGCAAGCCCGACTACACCAAGGCCCCCAAGATCCAGCGTCT
GGTTACTCCCCAGCGTCTCCAGCGCAAGCGCCAGCGCATTGCCCTCAAGC
GCCGTCGTGCTGAGGCTGCCCGCGAGGCTGCTAACGACTACGCCAAGCTC
CTTGCCAGCCGTGTCCACGAGGAGAAGGCCAAGCGTGATGAGCTCCGCAA
GCGGAGAGCGTCTTCGATGAGGAAGTAAATGAAGCTCAACATCTCCTACC
CGGCCAATGGGTCTCAGAAGATCATCGAGGTTGACGATGAGCGCAAGCTC
CGTCCCTTCATGGAGAAGCGCATGGGAACCGAAGTTGCCGGCGACTCTCT
CGGTGACGAGTTCAAGGGTTACATCCTCAAGATCACCGGTGGTAACGACA
AGCAAGGTTTCCCCATGAAGCAGGGTGTTCTCCTCCCCACCCGTACCCGC
CTCCTCCTTGCCGATGGCCACAGCTGCTACCGCCCCCGCCGCACTGGTGA
GCGCAAGCGCAAGTCCGTCCGTGGTGCCATCACCGGTCAGGACCTCTCTG
TTCTTGCCCTGAGCATCGTCAAGCAGGGTGAGGGTGAGCTCCCCGGTCTC
ACCGACACCGTTGTCCCCAAGAGACTCGGCCCCAAGCGTGCCACCAAGAT
CCGCCGCTTCTTCGGTCTCGACAAGAAGGACGACGTCCGCAAGTTCGTCA
TCCGTCGTACCGTCACCCGTGAGGGCAAGCCCGACTACACCAAGGCCCCC
AAGATCCAGCGTCTGGTTACTCCCCAGCGTCTCCAGCGCAAGCGCCAGCG
CATTGCCCTCAAGCGCCGTCGTGCTGAGGCTGCCCGCGAGGCTGCTAACG
ACTACGCCAAGCTCCTTGCCAGCCGTGTCCACGAGGAGAAGGCCAAGCGT
GATGAGCTCCGCAAGCGGAGAGCGTCTTCGATGAGGAAGTAAATGAAGCT
CAACATCTCCTACCCGGCCAATGGGTCTCAGAAGATCATCGAGGTTGACG
ATGAGCGCAAGCTCCGTCCCTTCATGGAGAAGCGCATGGGAACCGAAGTT
GCCGGCGACTCTCTCGGTGACGAGTTCAAGGGTTACATCCTCAAGATCAC
CGGTGGTAACGACAAGCAAGGTTTCCCCATGAAGCAGGGTGTTCTCCTCC
CCACCCGTACCCGCCTCCTCCTTGCCGATGGCCACAGCTGCTACCGCCCC
CGCCGCACTGGTGAGCGCAAGCGCAAGTCCGTCCGTGGTGCCATCACCGG
TCAGGACCTCTCTGTTCTTGCCCTGAGCATCGTCAAGCAGGGTGAGGGTG
AGCTCCCCGGTCTCACCGACACCGTTGTCCCCAAGAGACTCGGCCCCAAG
CGTGCCACCAAGATCCGCCGCTTCTTCGGTCTCGACAAGAAGGACGACGT
CCGCAAGTTCGTCATCCGTCGTACCGTCACCCGTGAGGGCAAGCCCGACT
ACACCAAGGCCCCCAAGATCCAGCGTCTGGTTACTCCCCAGCGTCTCCAG
CGCAAGCGCCAGCGCATTGCCCTCAAGCGCCGTCGTGCTGAGGCTGCCCG
CGAGGCTGCTAACGACTACGCCAAGCTCCTTGCCAGCCGTGTCCACGAGG
AGAAGGCCAAGCGTGATGAGCTCCGCAAGCGGAGAGCGTCTTCGATGAGG
AAGTAAATGAAGCTCAACATCTCCTACCCGGCCAATGGGTCTCAGAAGAT
CATCGAGGTTGACGATGAGCGCAAGCTCCGTCCCTTCATGGAGAAGCGCA
TGGGAACCGAAGTTGCCGGCGACTCTCTCGGTGACGAGTTCAAGGGTTAC
ATCCTCAAGATCACCGGTGGTAACGACAAGCAAGGTTTCCCCATGAAGCA
GGGTGTTCTCCTCCCCACCCGTACCCGCCTCCTCCTTGCCGATGGCCACA
GCTGCTACCGCCCCCGCCGCACTGGTGAGCGCAAGCGCAAGTCCGTCCGT
GGTGCCATCACCGGTCAGGACCTCTCTGTTCTTGCCCTGAGCATCGTCAA
GCAGGGTGAGGGTGAGCTCCCCGGTCTCACCGACACCGTTGTCCCCAAGA
GACTCGGCCCCAAGCGTGCCACCAAGATCCGCCGCTTCTTCGGTCTCGAC
AAGAAGGACGACGTCCGCAAGTTCGTCATCCGTCGTACCGTCACCCGTGA
GGGCAAGCCCGACTACACCAAGGCCCCCAAGATCCAGCGTCTGGTTACTC
CCCAGCGTCTCCAGCGCAAGCGCCAGCGCATTGCCCTCAAGCGCCGTCGT
GCTGAGGCTGCCCGCGAGGCTGCTAACGACTACGCCAAGCTCCTTGCCAG
CCGTGTCCACGAGGAGAAGGCCAAGCGTGATGAGCTCCGCAAGCGGAGAG
CGTCTTCGATGAGGAAGTAAATGAAGCTCAACATCTCCTACCCGGCCAAT
GGGTCTCAGAAGATCATCGAGGTTGACGATGAGCGCAAGCTCCGTCCCTT
CATGGAGAAGCGCATGGGAACCGAAGTTGCCGGCGACTCTCTCGGTGACG
AGTTCAAGGGTTACATCCTCAAGATCACCGGTGGTAACGACAAGCAAGGT
TTCCCCATGAAGCAGGGTGTTCTCCTCCCCACCCGTACCCGCCTCCTCCT
TGCCGATGGCCACAGCTGCTACCGCCCCCGCCGCACTGGTGAGCGCAAGC
GCAAGTCCGTCCGTGGTGCCATCACCGGTCAGGACCTCTCTGTTCTTGCC
CTGAGCATCGTCAAGCAGGGTGAGGGTGAGCTCCCCGGTCTCACCGACAC
CGTTGTCCCCAAGAGACTCGGCCCCAAGCGTGCCACCAAGATCCGCCGCT
TCTTCGGTCTCGACAAGAAGGACGACGTCCGCAAGTTCGTCATCCGTCGT
ACCGTCACCCGTGAGGGCAAGCCCGACTACACCAAGGCCCCCAAGATCCA
GCGTCTGGTTACTCCCCAGCGTCTCCAGCGCAAGCGCCAGCGCATTGCCC
TCAAGCGCCGTCGTGCTGAGGCTGCCCGCGAGGCTGCTAACGACTACGCC
AAGCTCCTTGCCAGCCGTGTCCACGAGGAGAAGGCCAAGCGTGATGAGCT
CCGCAAGCGGAGAGCGTCTTCGATGAGGAAGTAAATGAAGCTCAACATCT
CCTACCCGGCCAATGGGTCTCAGAAGATCATCGAGGTTGACGATGAGCGC
AAGCTCCGTCCCTTCATGGAGAAGCGCATGGGAACCGAAGTTGCCGGCGA
CTCTCTCGGTGACGAGTTCAAGGGTTACATCCTCAAGATCACCGGTGGTA
ACGACAAGCAAGGTTTCCCCATGAAGCAGGGTGTTCTCCTCCCCACCCGT
ACCCGCCTCCTCCTTGCCGATGGCCACAGCTGCTACCGCCCCCGCCGCAC
TGGTGAGCGCAAGCGCAAGTCCGTCCGTGGTGCCATCACCGGTCAGGACC
TCTCTGTTCTTGCCCTGAGCATCGTCAAGCAGGGTGAGGGTGAGCTCCCC
GGTCTCACCGACACCGTTGTCCCCAAGAGACTCGGCCCCAAGCGTGCCAC
CAAGATCCGCCGCTTCTTCGGTCTCGACAAGAAGGACGACGTCCGCAAGT
TCGTCATCCGTCGTACCGTCACCCGTGAGGGCAAGCCCGACTACACCAAG
GCCCCCAAGATCCAGCGTCTGGTTACTCCCCAGCGTCTCCAGCGCAAGCG
CCAGCGCATTGCCCTCAAGCGCCGTCGTGCTGAGGCTGCCCGCGAGGCTG
CTAACGACTACGCCAAGCTCCTTGCCAGCCGTGTCCACGAGGAGAAGGCC
AAGCGTGATGAGCTCCGCAAGCGGAGAGCGTCTTCGATGAGGAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6180CAN33_6180Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6180-T1CAN33_6180-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6180-T1.exon1CAN33_6180-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_6180-T1.exon2CAN33_6180-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_6180-T1.exon3CAN33_6180-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_6180-T1.exon4CAN33_6180-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_6180-T1.exon5CAN33_6180-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_6180-T1.exon6CAN33_6180-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_6180-T1.exon7CAN33_6180-T1.exon7Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6180-T1.cdsCAN33_6180-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR018282
DBxrefInterPro:IPR014401
DBxrefInterPro:IPR001377
DBxrefPFAM:PF01092
ProductRibosomal protein S6e family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1518303..1519561 +
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