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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1562212..1563016- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_6240-T1 ID=CAN33_6240-T1|Name=CAN33_6240-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=805bp|location=Sequence derived from alignment at NKJJ01000019.1:1562212..1563016- (Aspergillus niger FDAARGOS_311)
ATGTCGCTTTGCAAAGCTACCATGCCCTCGCCGGTGACATCATCCGCCAC
GATCCTCACCTGGCTCAGACAGTCCTCCTCCAGACGCTCGACGCAGACTT
GCCGTCTATTCTCCTCATACGGCAATGCTCACCGGTCTTCGAAGCGTGAA
TTGCAAACTGCCACTGCCTACCGTCCTCACTCGCTGCCCACCTCCTTCCC
GCCGCCCCGGAACACGGGCAACCCTGACACTTCCATCGCTGCCGACTTCC
CTTCTTTCCGTGAAATTTCTCAGCCCCAGATGCCCGGCCAGCAAGGCCTG
TCCGACCTAAGCCTCCGGGAAAGCGAGGCCCAGAAGTCCAAGCCCGTGCC
TGCTCCTGCTCCCGCCGAGAAGACCGCCGCCAAGCCCACTGAGAAGCCTC
GGCGCAAGCTGCGTGCCAGGAAGGCCGCGATGAAGCTGACCCCCGTGGCA
ATTGAGCAGCTTCGCAAACTCCTCTCACAGCCGAACCCCAAGCTGATTCG
AGTCGGTGTGAAGAACCGTGGCTGCTCCGGTCTCGCGTACCACCTGGAGT
ACGTGGAGAAGCCGGGCACTTTCGACGAAGTGGTGGAGCAGGACGGTGTC
AAAGTTCTCATCGACAGCAAGGCATTGTTCAGTATCATCGGTAGCGAGAT
GGACTGGCAGGAGGACAAGCTGAGCAGGAGATTCGTTTTCCGCAACCCGA
ATATTAGTAAGCTTCCCTTTGTCCGCGGGAAACCCCAGAAACAGTCGCTA
ACGTAATACTTGTGCAGAGGAACAATGTGGATGCGGTGAATCCTTCATGG
TCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1562212..1563016- >CAN33_6240-T1 ID=CAN33_6240-T1|Name=CAN33_6240-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1488bp|location=Sequence derived from alignment at NKJJ01000019.1:1562212..1563016- (Aspergillus niger FDAARGOS_311)
AGGAACAATGTGGATGCGGTGAATCCTTCATGGTCTGAATGTCGCTTTGC
AAAGCTACCATGCCCTCGCCGGTGACATCATCCGCCACGATCCTCACCTG
GCTCAGACAGTCCTCCTCCAGACGCTCGACGCAGACTTGCCGTCTATTCT
CCTCATACGGCAATGCTCACCGGTCTTCGAAGCGTGAATTGCAAACTGCC
ACTGCCTACCGTCCTCACTCGCTGCCCACCTCCTTCCCGCCGCCCCGGAA
CACGGGCAACCCTGACACTTCCATCGCTGCCGACTTCCCTTCTTTCCGTG
AAATTTCTCAGCCCCAGATGCCCGGCCAGCAAGGCCTGTCCGACCTAAGC
CTCCGGGAAAGCGAGGCCCAGAAGTCCAAGCCCGTGCCTGCTCCTGCTCC
CGCCGAGAAGACCGCCGCCAAGCCCACTGAGAAGCCTCGGCGCAAGCTGC
GTGCCAGGAAGGCCGCGATGAAGCTGACCCCCGTGGCAATTGAGCAGCTT
CGCAAACTCCTCTCACAGCCGAACCCCAAGCTGATTCGAGTCGGTGTGAA
GAACCGTGGCTGCTCCGGTCTCGCGTACCACCTGGAGTACGTGGAGAAGC
CGGGCACTTTCGACGAAGTGGTGGAGCAGGACGGTGTCAAAGTTCTCATC
GACAGCAAGGCATTGTTCAGTATCATCGGTAGCGAGATGGACTGGCAGGA
GGACAAGCTGAGCAGGAGATTCGTTTTCCGCAACCCGAATATTAAGGAAC
AATGTGGATGCGGTGAATCCTTCATGGTCTGAATGTCGCTTTGCAAAGCT
ACCATGCCCTCGCCGGTGACATCATCCGCCACGATCCTCACCTGGCTCAG
ACAGTCCTCCTCCAGACGCTCGACGCAGACTTGCCGTCTATTCTCCTCAT
ACGGCAATGCTCACCGGTCTTCGAAGCGTGAATTGCAAACTGCCACTGCC
TACCGTCCTCACTCGCTGCCCACCTCCTTCCCGCCGCCCCGGAACACGGG
CAACCCTGACACTTCCATCGCTGCCGACTTCCCTTCTTTCCGTGAAATTT
CTCAGCCCCAGATGCCCGGCCAGCAAGGCCTGTCCGACCTAAGCCTCCGG
GAAAGCGAGGCCCAGAAGTCCAAGCCCGTGCCTGCTCCTGCTCCCGCCGA
GAAGACCGCCGCCAAGCCCACTGAGAAGCCTCGGCGCAAGCTGCGTGCCA
GGAAGGCCGCGATGAAGCTGACCCCCGTGGCAATTGAGCAGCTTCGCAAA
CTCCTCTCACAGCCGAACCCCAAGCTGATTCGAGTCGGTGTGAAGAACCG
TGGCTGCTCCGGTCTCGCGTACCACCTGGAGTACGTGGAGAAGCCGGGCA
CTTTCGACGAAGTGGTGGAGCAGGACGGTGTCAAAGTTCTCATCGACAGC
AAGGCATTGTTCAGTATCATCGGTAGCGAGATGGACTGGCAGGAGGACAA
GCTGAGCAGGAGATTCGTTTTCCGCAACCCGAATATTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051536 | iron-sulfur cluster binding |
| GO:0005198 | structural molecule activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0097428 | protein maturation by iron-sulfur cluster transfer |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017870 |
| DBxref | InterPro:IPR016092 |
| DBxref | InterPro:IPR035903 |
| DBxref | InterPro:IPR000361 |
| DBxref | PFAM:PF01521 |
| Product | iron-sulfur cluster assembly accessory protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1562212..1563016 - |
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