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CAN33_6320-T1, CAN33_6320-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6320-T1
Unique NameCAN33_6320-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1600864..1601151+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6320-T1 ID=CAN33_6320-T1|Name=CAN33_6320-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=288bp|location=Sequence derived from alignment at NKJJ01000019.1:1600864..1601151+ (Aspergillus niger FDAARGOS_311)
ATGAGCAGCTACTTCCGCGTCACGCTCATGCGCTCAGCAATCGGTCTCCC
ACGCCGCACCAACGACGTCCTAAAAGCCCTCGGTTTGAAGAAGCGCATGG
CCACCGTCTTCCACCCCGTGTCGCCGTCTGTGGCGGGTCAAATCATGAAA
GTCAAGGAATTGGTGCAGGTGCAGGAAGTCGATCGTCGACTCACGAAGCA
AGAGGTGCATTTGGAGCGCAAGCCGGATCCGGGATACTATGTTGAGAAGA
CCTCCGGGGTGGAGTTTGAGGAGAATAGATTGGCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1600864..1601151+

>CAN33_6320-T1 ID=CAN33_6320-T1|Name=CAN33_6320-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=504bp|location=Sequence derived from alignment at NKJJ01000019.1:1600864..1601151+ (Aspergillus niger FDAARGOS_311)
ATGAGCAGCTACTTCCGCGTCACGCTCATGCGCTCAGCAATCGGTCTCCC
ACGCCGCACCAACGACGTCCTAAAAGCCCTCGGTTTGAAGAAGCGCATGG
CCACCGTCTTCCACCCCGTGTCGCCGTCTGTGGCGGGTCAAATCATGAAA
GTCAAGGAATTGGTGCAGGTGCATTTGGAGCGCAAGCCGGATCCGGGATA
CTATGTTGAGAAGACCTCCGGGGTGGAGTTTGAGGAGAATAGATTGGCTT
GAATGAGCAGCTACTTCCGCGTCACGCTCATGCGCTCAGCAATCGGTCTC
CCACGCCGCACCAACGACGTCCTAAAAGCCCTCGGTTTGAAGAAGCGCAT
GGCCACCGTCTTCCACCCCGTGTCGCCGTCTGTGGCGGGTCAAATCATGA
AAGTCAAGGAATTGGTGCAGGTGCATTTGGAGCGCAAGCCGGATCCGGGA
TACTATGTTGAGAAGACCTCCGGGGTGGAGTTTGAGGAGAATAGATTGGC
TTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6320CAN33_6320Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6320-T1.exon1CAN33_6320-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_6320-T1.exon2CAN33_6320-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6320-T1.cdsCAN33_6320-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6320-T1CAN33_6320-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000191.6
DBxrefInterPro:IPR005996
DBxrefInterPro:IPR016082
DBxrefInterPro:IPR036919
DBxrefPFAM:PF00327
ProductRibosomal protein L30p/L7e family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1600864..1601151 +
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