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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1670181..1671241- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_6415-T1 ID=CAN33_6415-T1|Name=CAN33_6415-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1061bp|location=Sequence derived from alignment at NKJJ01000019.1:1670181..1671241- (Aspergillus niger FDAARGOS_311)
ATGCAGATCTTCGTTAAGACCCGTGAGTATTCCTAACCATCTCTCAAGCT
TAGCATCAGGAATCCATCATCTGACTGTTTGTTTCCATCTAGTCACCGGC
AAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAA
GACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGA
TCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAAC
ATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGGTGGTAT
GCAGATTTGTAAGTTGTCCTGAACTCTATTTGCCACACTGTTGGCCACCT
TCACTTGGACCATATACTGACCTCATATTAGTCGTCAAGACCCTGACCGG
AAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAATGTGA
AGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTG
ATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAA
CATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTA
TGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTT
GAATCTTCCGACACAATTGATAACGTTAAGACCAAGATTCAAGACAAGGA
AGGCATCCCCCCGGACCAGCAGCGTTTGATCTTCGCTGGTAAGCAGTTGG
AGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCACTCTT
CACCTTGTCCTTCGTCTCCGTGGTGGTATGCAGATCTTCGTGAAGACTCT
TACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACCATTGATA
ACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCAGCAG
CGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGA
TTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTG
GCGGAAACTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1670181..1671241- >CAN33_6415-T1 ID=CAN33_6415-T1|Name=CAN33_6415-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2754bp|location=Sequence derived from alignment at NKJJ01000019.1:1670181..1671241- (Aspergillus niger FDAARGOS_311)
TCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCT
GACACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCC
CCCGGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCC
GTACCCTGTCTGACTACAACATTCAAAAGGAATCCACCCTTCACCTCGTC
CTTCGTCTGCGTGGTGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAA
GACGATCACATTGGAAGTTGAATCTTCCGACACAATTGATAACGTTAAGA
CCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATC
TTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACAT
CCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGC
AGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAG
AGCTCGGATACCATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGG
CATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAG
ATGGACGTACGCTCTCCGATTACAACATCCAGAAGGAGAGCACTCTGCAC
CTGGTGCTCCGTCTCCGTGGCGGAAACTAATCACCGGCAAGACAATCACC
CTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAAGACCAAGATCCA
GGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAA
AGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAG
TCTACTCTCCATCTTGTCCTCCGCCTGCGTGGTGGTATGCAGATTTATGC
AGATCTTCGTTAAGACCCTCGTCAAGACCCTGACCGGAAAGACCATCACC
CTTGAGGTGGAGTCTTCTGACACCATCGACAATGTGAAGACCAAGATTCA
GGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGAA
AGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAA
TCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTATGCAGATCTTCGT
CAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCCGACA
CAATTGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCG
GACCAGCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTAC
CTTGTCCGACTACAACATCCAGAAAGAATCCACTCTTCACCTTGTCCTTC
GTCTCCGTGGTGGTATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACG
ATTACGCTGGAGGTGGAGAGCTCGGATACCATTGATAACGTCAAGACTAA
GATTCAAGATAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCG
CTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAACATCCAG
AAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTGGCGGAAACTAATC
ACCGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAA
CGTCAAGACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGC
GTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACGCTTAGTGAC
TACAACATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCCGCCTGCGTGG
TGGTATGCAGATTTATGCAGATCTTCGTTAAGACCCTCGTCAAGACCCTG
ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAA
TGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGC
GTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGAC
TACAACATTCAAAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGG
TGGTATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGG
AAGTTGAATCTTCCGACACAATTGATAACGTTAAGACCAAGATTCAAGAC
AAGGAAGGCATCCCCCCGGACCAGCAGCGTTTGATCTTCGCTGGTAAGCA
GTTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAAGAATCCA
CTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAGATCTTCGTGAAG
ACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCGGATACCAT
TGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACC
AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTC
TCCGATTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCT
CCGTGGCGGAAACTAATCACCGGCAAGACAATCACCCTCGAGGTCGAGTC
CAGCGATACCATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCA
TCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGAT
GGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCATCT
TGTCCTCCGCCTGCGTGGTGGTATGCAGATTTATGCAGATCTTCGTTAAG
ACCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264JQ1 |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR019954 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR019956 |
| DBxref | PFAM:PF14560 |
| DBxref | PFAM:PF00240 |
| DBxref | PFAM:PF13881 |
| DBxref | PFAM:PF11976 |
| Product | Ubiquitin |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1670181..1671241 - |
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