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CAN33_6435-T1, CAN33_6435-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6435-T1
Unique NameCAN33_6435-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1688495..1689272-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6435-T1 ID=CAN33_6435-T1|Name=CAN33_6435-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=778bp|location=Sequence derived from alignment at NKJJ01000019.1:1688495..1689272- (Aspergillus niger FDAARGOS_311)
ATGTACTATATTCTCTACCTCGCAAGTATGTAGATGATTTCGTTTGCCAT
TCGTCCGACCTTTGCTTCTCTTCCCCTTCGTTTATGCCATTGGGTCAGAC
CAACGCCTCCGAGTGGCCATGCTCTGTTTTTTTCCCACTTCATGTTAGAC
ACCATGCATGTATGCATGTGGTGGGAAAACAACAATGGCTGGGATCAAGC
CGACTGCGGTGGTGATTGTTATTGACTCAAGGCGATGCGATTTCTTATCT
ACACTCTCTATGATTTGTCGATCGCTCGGGGAATTTGCATCCATCGGAGC
GACCGAGCGTTAAAACACGATCCGATCGCCATTCGTCCTTTAACAGCCAT
CCATTAACATTTCATGTACAGGTCTCTGCCGACGCCGGCACTGGGCAGAA
CCTGCCTACGAATCCTATGCAGTCGGAGGCGGTTACACGTGCATTGTCCG
GGTCAACAACCGGGAATACCAGACGGAGGACGTTTGCGAATCGAAGACTC
TAGCTGAGGAGAATGCAGCGATGCGCGCGTACCTGATTTGCCGCAACTTC
TCTGTCAACGACGGCATGTACCCTGCTGGTCATGAACACCGGGGGGACCC
ATTCAGGGAATTCCGGTCGCCATTGGCACGGGAAGAAAGGGACGCTATGG
AGATGAGACGGATATGTCGACTAGCGGCGAGAGCAGAAGTGGTGGGAGCA
GTCCGGAGAGTTGTGAAGGGAGACTGGATCGACGGGGCGTTGGACCGACG
AGGGCGCTTGCTTTTGGGCAGTAAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1688495..1689272-

>CAN33_6435-T1 ID=CAN33_6435-T1|Name=CAN33_6435-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=864bp|location=Sequence derived from alignment at NKJJ01000019.1:1688495..1689272- (Aspergillus niger FDAARGOS_311)
GTCTCTGCCGACGCCGGCACTGGGCAGAACCTGCCTACGAATCCTATGCA
GTCGGAGGCGGTTACACGTGCATTGTCCGGGTCAACAACCGGGAATACCA
GACGGAGGACGTTTGCGAATCGAAGACTCTAGCTGAGGAGAATGCAGCGA
TGCGCGCGTACCTGATTTGCCGCAACTTCTCTGTCAACGACGGCATGTAC
CCTGCTGGTCATGAACACCGGGGGGACCCATTCAGGGAATTCCGGTCGCC
ATTGGCACGGGAAGAAAGGGACGCTATGGAGATGAGACGGATATGTCGAC
TAGCGGCGAGAGCAGAAGTGGTGGGAGCAGTCCGGAGAGTTGTGAAGGGA
GACTGGATCGACGGGGCGTTGGACCGACGAGGGCGCTTGCTTTTGGGCAG
TAAGTAGATGTACTATATTCTCTACCTCGCAAGTCTCTGCCGACGCCGGC
ACTGGGCAGAACCTGCCTACGAATCCTATGCAGTCGGAGGCGGTTACACG
TGCATTGTCCGGGTCAACAACCGGGAATACCAGACGGAGGACGTTTGCGA
ATCGAAGACTCTAGCTGAGGAGAATGCAGCGATGCGCGCGTACCTGATTT
GCCGCAACTTCTCTGTCAACGACGGCATGTACCCTGCTGGTCATGAACAC
CGGGGGGACCCATTCAGGGAATTCCGGTCGCCATTGGCACGGGAAGAAAG
GGACGCTATGGAGATGAGACGGATATGTCGACTAGCGGCGAGAGCAGAAG
TGGTGGGAGCAGTCCGGAGAGTTGTGAAGGGAGACTGGATCGACGGGGCG
TTGGACCGACGAGGGCGCTTGCTTTTGGGCAGTAAGTAGATGTACTATAT
TCTCTACCTCGCAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6435CAN33_6435Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6435-T1CAN33_6435-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6435-T1.cdsCAN33_6435-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6435-T1.exon2CAN33_6435-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_6435-T1.exon1CAN33_6435-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR014720
DBxrefPFAM:PF00035
ProductDouble-stranded RNA binding motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1688495..1689272 -
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