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CAN33_6450-T1, CAN33_6450-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6450-T1
Unique NameCAN33_6450-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1701243..1702020+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6450-T1 ID=CAN33_6450-T1|Name=CAN33_6450-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=778bp|location=Sequence derived from alignment at NKJJ01000019.1:1701243..1702020+ (Aspergillus niger FDAARGOS_311)
ATGGGACTAACCCGCCCCTACCTCCTCCTCTACAACGCCCTCTCCCTAAC
CCTCTGGGCAACATGCACCATCCGCGGCCTCTCCCTCCTCCCATCCACCA
GCATCCCCAAGATATTCAATGATGTCTACACCACCCTCCTAACAACCCAA
TCCCTCGCCCTCCTCGAGATCCTCCACAGTCTGCTCCGTCTCGTCCGCGC
CCCGGTCCTCACTACCGCTATGCAGGTCGCTAGTCGCATACTTCTCGTTT
GGGGCATCATGTATCCGTTCCAGGGCGTTCTCGTGGGTGGAAGTGAGGAG
GCGGGGCTTGGTGACTATGCGTTCCTGGGTTGTTTGAGCGCCTGGGGTGT
TACTGAGTGTATTCGCTATGGGTTCTTTGCGTTGCAGTTGTCCGGAGTGG
GTGTGCCGGGGTGGTGGGCTTGGTTGAGGTATGTTTCTATTTCATGTTTC
ATTTGTGTGTTTGGTGGAGTAAATGCTAATGTGTGTGTGTTTGTGTGAAG
GTATAATACGTTCTATGTGCTCTATCCGCTGGGTATTACGAGTGAGTGTG
TTATGGTGTTTAAGGCGTTGGGGCCGGCGGGGGAGTTGGTGAGTCCGCTG
TATAAGTGGTTCTTGGTCGCGGTGTTGGGGATTTATGTTCCTGGTGAGTT
TATCTTCTTCTTTGGGGGAGATGGTTGAGGTTTATTGCTGATCAAGGGCG
TGTGCTAATTGTTTAGGATCGTATATTTTGTATACGCATATGATTGCACA
GAGGCGCAAGGCGATGAAGAAGAAATAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1701243..1702020+

>CAN33_6450-T1 ID=CAN33_6450-T1|Name=CAN33_6450-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1899bp|location=Sequence derived from alignment at NKJJ01000019.1:1701243..1702020+ (Aspergillus niger FDAARGOS_311)
ATGGGACTAACCCGCCCCTACCTCCTCCTCTACAACGCCCTCTCCCTAAC
CCTCTGGGCAACATGCACCATCCGCGGCCTCTCCCTCCTCCCATCCACCA
GCATCCCCAAGATATTCAATGATGTCTACACCACCCTCCTAACAACCCAA
TCCCTCGCCCTCCTCGAGATCCTCCACAGTCTGCTCCGTCTCGTCCGCGC
CCCGGTCCTCACTACCGCTATGCAGGTCGCTAGTCGCATACTTCTCGTTT
GGGGCATCATGTATCCGTTCCAGGGCGTTCTCGTGGGTGGAAGTGAGGAG
GCGGGGCTTGGTGACTATGCGTTCCTGGGTTGTTTGAGCGCCTGGGGTGT
TACTGAGTGTATTCGCTATGGGTTCTTTGCGTTGCAGTTGTCCGGAGTGG
GTGTGCCGGGGTGGTGGGCTTGGTTGAGGTATAATACGTTCTATGTGCTC
TATCCGCTGGGTATTACGAGTGAGTGTGTTATGGTGTTTAAGGCGTTGGG
GCCGGCGGGGGAGTTGGTGAGTCCGCTGTATAAGTGGTTCTTGGTCGCGG
TGTTGGGGATTTATGTTCCTGGATCGTATATTTTGTATACGCATATGATT
GCACAGAGGCGCAAGGCGATGAAGAAGAAATAAATGGGACTAACCCGCCC
CTACCTCCTCCTCTACAACGCCCTCTCCCTAACCCTCTGGGCAACATGCA
CCATCCGCGGCCTCTCCCTCCTCCCATCCACCAGCATCCCCAAGATATTC
AATGATGTCTACACCACCCTCCTAACAACCCAATCCCTCGCCCTCCTCGA
GATCCTCCACAGTCTGCTCCGTCTCGTCCGCGCCCCGGTCCTCACTACCG
CTATGCAGGTCGCTAGTCGCATACTTCTCGTTTGGGGCATCATGTATCCG
TTCCAGGGCGTTCTCGTGGGTGGAAGTGAGGAGGCGGGGCTTGGTGACTA
TGCGTTCCTGGGTTGTTTGAGCGCCTGGGGTGTTACTGAGTGTATTCGCT
ATGGGTTCTTTGCGTTGCAGTTGTCCGGAGTGGGTGTGCCGGGGTGGTGG
GCTTGGTTGAGGTATAATACGTTCTATGTGCTCTATCCGCTGGGTATTAC
GAGTGAGTGTGTTATGGTGTTTAAGGCGTTGGGGCCGGCGGGGGAGTTGG
TGAGTCCGCTGTATAAGTGGTTCTTGGTCGCGGTGTTGGGGATTTATGTT
CCTGGATCGTATATTTTGTATACGCATATGATTGCACAGAGGCGCAAGGC
GATGAAGAAGAAATAAATGGGACTAACCCGCCCCTACCTCCTCCTCTACA
ACGCCCTCTCCCTAACCCTCTGGGCAACATGCACCATCCGCGGCCTCTCC
CTCCTCCCATCCACCAGCATCCCCAAGATATTCAATGATGTCTACACCAC
CCTCCTAACAACCCAATCCCTCGCCCTCCTCGAGATCCTCCACAGTCTGC
TCCGTCTCGTCCGCGCCCCGGTCCTCACTACCGCTATGCAGGTCGCTAGT
CGCATACTTCTCGTTTGGGGCATCATGTATCCGTTCCAGGGCGTTCTCGT
GGGTGGAAGTGAGGAGGCGGGGCTTGGTGACTATGCGTTCCTGGGTTGTT
TGAGCGCCTGGGGTGTTACTGAGTGTATTCGCTATGGGTTCTTTGCGTTG
CAGTTGTCCGGAGTGGGTGTGCCGGGGTGGTGGGCTTGGTTGAGGTATAA
TACGTTCTATGTGCTCTATCCGCTGGGTATTACGAGTGAGTGTGTTATGG
TGTTTAAGGCGTTGGGGCCGGCGGGGGAGTTGGTGAGTCCGCTGTATAAG
TGGTTCTTGGTCGCGGTGTTGGGGATTTATGTTCCTGGATCGTATATTTT
GTATACGCATATGATTGCACAGAGGCGCAAGGCGATGAAGAAGAAATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6450CAN33_6450Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6450-T1.exon1CAN33_6450-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_6450-T1.exon2CAN33_6450-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_6450-T1.exon3CAN33_6450-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6450-T1.cdsCAN33_6450-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6450-T1CAN33_6450-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007482
DBxrefPFAM:PF04387
ProductProtein tyrosine phosphatase-like protein PTPLA family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1701243..1702020 +
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