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CAN33_6540-T1, CAN33_6540-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6540-T1
Unique NameCAN33_6540-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1770046..1771217-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6540-T1 ID=CAN33_6540-T1|Name=CAN33_6540-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1172bp|location=Sequence derived from alignment at NKJJ01000019.1:1770046..1771217- (Aspergillus niger FDAARGOS_311)
ATGTCCCAGTACCGTGAACTGGGTGAGGATTCTGGAAAAATGGCCATTTC
CTACGCAAGTGGACTTCCAGCGGACCATACTCCTGCTCTTCCGTCATTTC
GAGAGGTGAGCCAACATTACTACGCCTGGCAAAACCGACCGGTGGTTCCG
CCGTAAGAGAATCAGTGAGACTAACGTACTTTTTGATAGCTACTCCCGCC
TCATCTCCATGATGAGATCGAATCGACCTCATATTTCACTTCTCGCCAGC
ATGCGCGCGAGCGGCCTACATCAGCAGCCCACGAATTGACGTCCAATCCC
CGCCCTTTCTCTGATCGTCCCTACGGATCACCCCCGAAATTGCCATTCGC
TGGCGATTATGCCGCCCGGTCGAGTGAACCCCAAAGCCGGATGGCTGGGC
ACCCGACCGACCCCATCACAGGCTCTCCTCGTTACGCTTCTCGTGGTCCG
AGTCCTATTCTACCTTCCATCCGGGACCTTCAGTCGCTCCCTGAACGGGG
ACTGAATACTTCGGGCGCCGCTTACCCAGATTCAAGGGCCCTTTCTCGAC
CAGACTTCGCAGCGCAGGAATTCAGGGCGGGCCCGGTTGGCCCCCACGCA
TATCCCCCAACCAACATTCCAGGCACAGTACCGGGTGATCGGAGGAGCGT
GGATTCTTTTCCCGTCATGCCCAATCAGACTGGCTATGCCTATCCCGCAA
TGGCTTACCAGAGTGATTCCGAACAACCTTCTCCGCAATCCCTTTCTCAT
GCTCAACAATCAAATTTCGGTATCCTTGGAGATTCGATCGATCCCAAGAA
CAAGCGGAGACGGGGCAACCTGCCCAAGCCAGTCACCGACATTCTGCGTG
CCTGGTTCCATGAACATCTTGACCATCCGTATCCCAGTGAAGAGGACAAA
CAGATGTTCATGACCCGCACTGGTCTCACTATCAGCCAGGTTAGTAGCAG
TTCTCCCCCCTTGTCTAACAAATCAGCACATGCTAATCAAAGATCTATAT
ACAGATCAGCAATTGGTTCATCAATGCTAGACGGCGTCAACTTCCTGCTC
TCCGGAACCAGATGCGAAACGGTGGAAACGACATTGACTCTCAACGGCAA
TCTCCCTTCAGTGACATGGACCAGACGTCCCCGGAATCAATGCCGTCTCC
TCACCAGATCGTCAAATCATAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1770046..1771217-

>CAN33_6540-T1 ID=CAN33_6540-T1|Name=CAN33_6540-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3069bp|location=Sequence derived from alignment at NKJJ01000019.1:1770046..1771217- (Aspergillus niger FDAARGOS_311)
ATCAGCAATTGGTTCATCAATGCTAGACGGCGTCAACTTCCTGCTCTCCG
GAACCAGATGCGAAACGGTGGAAACGACATTGACTCTCAACGGCAATCTC
CCTTCAGTGACATGGACCAGACGTCCCCGGAATCAATGCCGTCTCCTCAC
CAGATCGTCAAATCATAACTACTCCCGCCTCATCTCCATGATGAGATCGA
ATCGACCTCATATTTCACTTCTCGCCAGCATGCGCGCGAGCGGCCTACAT
CAGCAGCCCACGAATTGACGTCCAATCCCCGCCCTTTCTCTGATCGTCCC
TACGGATCACCCCCGAAATTGCCATTCGCTGGCGATTATGCCGCCCGGTC
GAGTGAACCCCAAAGCCGGATGGCTGGGCACCCGACCGACCCCATCACAG
GCTCTCCTCGTTACGCTTCTCGTGGTCCGAGTCCTATTCTACCTTCCATC
CGGGACCTTCAGTCGCTCCCTGAACGGGGACTGAATACTTCGGGCGCCGC
TTACCCAGATTCAAGGGCCCTTTCTCGACCAGACTTCGCAGCGCAGGAAT
TCAGGGCGGGCCCGGTTGGCCCCCACGCATATCCCCCAACCAACATTCCA
GGCACAGTACCGGGTGATCGGAGGAGCGTGGATTCTTTTCCCGTCATGCC
CAATCAGACTGGCTATGCCTATCCCGCAATGGCTTACCAGAGTGATTCCG
AACAACCTTCTCCGCAATCCCTTTCTCATGCTCAACAATCAAATTTCGGT
ATCCTTGGAGATTCGATCGATCCCAAGAACAAGCGGAGACGGGGCAACCT
GCCCAAGCCAGTCACCGACATTCTGCGTGCCTGGTTCCATGAACATCTTG
ACCATCCGTATCCCAGTGAAGAGGACAAACAGATGTTCATGACCCGCACT
GGTCTCACTATCAGCCAGATGTCCCAGTACCGTGAACTGGGTGAGGATTC
TGGAAAAATGGCCATTTCCTACGCAAGTGGACTTCCAGCGGACCATACTC
CTGCTCTTCCGTCATTTCGAGAGATCAGCAATTGGTTCATCAATGCTAGA
CGGCGTCAACTTCCTGCTCTCCGGAACCAGATGCGAAACGGTGGAAACGA
CATTGACTCTCAACGGCAATCTCCCTTCAGTGACATGGACCAGACGTCCC
CGGAATCAATGCCGTCTCCTCACCAGATCGTCAAATCATAACTACTCCCG
CCTCATCTCCATGATGAGATCGAATCGACCTCATATTTCACTTCTCGCCA
GCATGCGCGCGAGCGGCCTACATCAGCAGCCCACGAATTGACGTCCAATC
CCCGCCCTTTCTCTGATCGTCCCTACGGATCACCCCCGAAATTGCCATTC
GCTGGCGATTATGCCGCCCGGTCGAGTGAACCCCAAAGCCGGATGGCTGG
GCACCCGACCGACCCCATCACAGGCTCTCCTCGTTACGCTTCTCGTGGTC
CGAGTCCTATTCTACCTTCCATCCGGGACCTTCAGTCGCTCCCTGAACGG
GGACTGAATACTTCGGGCGCCGCTTACCCAGATTCAAGGGCCCTTTCTCG
ACCAGACTTCGCAGCGCAGGAATTCAGGGCGGGCCCGGTTGGCCCCCACG
CATATCCCCCAACCAACATTCCAGGCACAGTACCGGGTGATCGGAGGAGC
GTGGATTCTTTTCCCGTCATGCCCAATCAGACTGGCTATGCCTATCCCGC
AATGGCTTACCAGAGTGATTCCGAACAACCTTCTCCGCAATCCCTTTCTC
ATGCTCAACAATCAAATTTCGGTATCCTTGGAGATTCGATCGATCCCAAG
AACAAGCGGAGACGGGGCAACCTGCCCAAGCCAGTCACCGACATTCTGCG
TGCCTGGTTCCATGAACATCTTGACCATCCGTATCCCAGTGAAGAGGACA
AACAGATGTTCATGACCCGCACTGGTCTCACTATCAGCCAGATGTCCCAG
TACCGTGAACTGGGTGAGGATTCTGGAAAAATGGCCATTTCCTACGCAAG
TGGACTTCCAGCGGACCATACTCCTGCTCTTCCGTCATTTCGAGAGATCA
GCAATTGGTTCATCAATGCTAGACGGCGTCAACTTCCTGCTCTCCGGAAC
CAGATGCGAAACGGTGGAAACGACATTGACTCTCAACGGCAATCTCCCTT
CAGTGACATGGACCAGACGTCCCCGGAATCAATGCCGTCTCCTCACCAGA
TCGTCAAATCATAACTACTCCCGCCTCATCTCCATGATGAGATCGAATCG
ACCTCATATTTCACTTCTCGCCAGCATGCGCGCGAGCGGCCTACATCAGC
AGCCCACGAATTGACGTCCAATCCCCGCCCTTTCTCTGATCGTCCCTACG
GATCACCCCCGAAATTGCCATTCGCTGGCGATTATGCCGCCCGGTCGAGT
GAACCCCAAAGCCGGATGGCTGGGCACCCGACCGACCCCATCACAGGCTC
TCCTCGTTACGCTTCTCGTGGTCCGAGTCCTATTCTACCTTCCATCCGGG
ACCTTCAGTCGCTCCCTGAACGGGGACTGAATACTTCGGGCGCCGCTTAC
CCAGATTCAAGGGCCCTTTCTCGACCAGACTTCGCAGCGCAGGAATTCAG
GGCGGGCCCGGTTGGCCCCCACGCATATCCCCCAACCAACATTCCAGGCA
CAGTACCGGGTGATCGGAGGAGCGTGGATTCTTTTCCCGTCATGCCCAAT
CAGACTGGCTATGCCTATCCCGCAATGGCTTACCAGAGTGATTCCGAACA
ACCTTCTCCGCAATCCCTTTCTCATGCTCAACAATCAAATTTCGGTATCC
TTGGAGATTCGATCGATCCCAAGAACAAGCGGAGACGGGGCAACCTGCCC
AAGCCAGTCACCGACATTCTGCGTGCCTGGTTCCATGAACATCTTGACCA
TCCGTATCCCAGTGAAGAGGACAAACAGATGTTCATGACCCGCACTGGTC
TCACTATCAGCCAGATGTCCCAGTACCGTGAACTGGGTGAGGATTCTGGA
AAAATGGCCATTTCCTACGCAAGTGGACTTCCAGCGGACCATACTCCTGC
TCTTCCGTCATTTCGAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6540CAN33_6540Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6540-T1CAN33_6540-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6540-T1.cdsCAN33_6540-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6540-T1.exon3CAN33_6540-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_6540-T1.exon2CAN33_6540-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_6540-T1.exon1CAN33_6540-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR008422
DBxrefInterPro:IPR001356
DBxrefPFAM:PF00046
DBxrefPFAM:PF05920
ProductHomeobox KN domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1770046..1771217 -
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