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CAN33_6575-T1, CAN33_6575-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6575-T1
Unique NameCAN33_6575-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1799686..1800576-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6575-T1 ID=CAN33_6575-T1|Name=CAN33_6575-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=891bp|location=Sequence derived from alignment at NKJJ01000019.1:1799686..1800576- (Aspergillus niger FDAARGOS_311)
ATGGTATGTGCCTTCTTCCTCGCTGTCCCGGCCAGTTGTGTTGAAAATCC
CCCACTTTGCGGGGCAGATCTGCCTGGCATTCTCAACAGGATTGCTGACA
TCGCATCGTCTAGGCCGACTCTCTGACCGAAGAGCAAGTTTCTGAGTACA
AGGAGGCCTTCTCCCTCTTTGTGAGTGCTCCCTGAATGACCCTCCGATCA
TCCTGATCGATGAGCTATCTTTACCGGAGCATAATGCTAATGTGTTTTCG
GACTTAATAGGACAAGGATGGCGATGGTGGGTGGAATTCTATCCCCTTCA
CATTATACCTGTAGCGCTCGATCCGACTGCGGGATTTCGACAGCATTTTC
CAGAACGATTTGGATCATAATACTAATTTAAATCGGTGAATCAGGCCAGA
TCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAACCCC
TCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACAACAA
CGGAACGATCGACTTCCCCGGTATGTGTTAGATTTACGCCTGTAAGGCGG
AAATGCGGGCTGGATTGTGATTGACTTTTGCCGCCAGAATTCCTTACCAT
GATGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGG
CTTTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAG
CTGCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGT
CGATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACT
GTATGTTTACCATGCCCGATTATACTCATAACATAACATACTGACTCTGC
TACCAGACAACGAGTTCGTCCAGCTCATGATGCAAAAATAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1799686..1800576-

>CAN33_6575-T1 ID=CAN33_6575-T1|Name=CAN33_6575-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2700bp|location=Sequence derived from alignment at NKJJ01000019.1:1799686..1800576- (Aspergillus niger FDAARGOS_311)
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAM1CAN33_6575Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6575-T1CAN33_6575-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6575-T1.cdsCAN33_6575-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6575-T1.exon6CAN33_6575-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_6575-T1.exon5CAN33_6575-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_6575-T1.exon4CAN33_6575-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_6575-T1.exon3CAN33_6575-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_6575-T1.exon2CAN33_6575-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_6575-T1.exon1CAN33_6575-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR002048
DBxrefPFAM:PF08726
DBxrefPFAM:PF14658
DBxrefPFAM:PF13833
DBxrefPFAM:PF13499
DBxrefPFAM:PF13405
DBxrefPFAM:PF13202
DBxrefPFAM:PF00036
Producttranslation elongation factor EF1B gamma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1799686..1800576 -
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