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CAN33_6625-T1, CAN33_6625-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6625-T1
Unique NameCAN33_6625-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1822999..1823777-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6625-T1 ID=CAN33_6625-T1|Name=CAN33_6625-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=779bp|location=Sequence derived from alignment at NKJJ01000019.1:1822999..1823777- (Aspergillus niger FDAARGOS_311)
ATGACCAAGCTCCTAGCAATCACCCTCATCCTCACCATCCTCTCCCTGCT
TCCAACCTGCTACAGCCACCCCATCAACGAAACCTCCCACTCCTCAGCCG
TCCCCTACGGCATGCTAATCACCCACTGCACCGTCCCCAACACCATCGCC
CTAACCTTCGACGACGGCCCCTCAACCTTCACCCCAGCCCTTCTGGACCT
CCTCAGCGAATACGGGGCACGCTCAACCTTCTTCGTGAACGGCTACCGAC
TACAGGAGAGTGCTCCCATCCTACAACGCATCTACACTGAAGGGCACCAA
ATAGCCTCTCACACGTAAGTCTCCCCAGTCTCGCTACTATCTCCATGAAA
CCGAACCCCTCGAACCAAATACCCTGATATATATTCATCACTAGATTTGG
CCACTCCTTCCTCCCTACCCTCGACAACCCCACCATAATTAACGAGATGA
ACACCCTCGAGTCCTTATTCCGGACCTTCATCGGTCGAGTCCCCACCTAT
ATGCGCCCGCCCTTCCTAGCTGTGGACGGAAGAATCCTCGCATTGATGAC
GGACTTGGAATACCATGTTATTGGGGCAAGTGTAGACACAAAGGACTTTG
AGAATAATACGCCTCAGTTAATAGGGGAGAGTGTGAGGAAGTTTGTGGAG
GGGGTGCAGGCGGGCGGGACGGTGGTGTTGGCACATGATACGCATGCGCA
GACGGTTTGGACTTTGACTAGGGTTATGTTGGAGGAGAGTAGGAGGAGGG
GGTTGATTGGTAGGTTTACCCCTCCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1822999..1823777-

>CAN33_6625-T1 ID=CAN33_6625-T1|Name=CAN33_6625-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1398bp|location=Sequence derived from alignment at NKJJ01000019.1:1822999..1823777- (Aspergillus niger FDAARGOS_311)
ATTTGGCCACTCCTTCCTCCCTACCCTCGACAACCCCACCATAATTAACG
AGATGAACACCCTCGAGTCCTTATTCCGGACCTTCATCGGTCGAGTCCCC
ACCTATATGCGCCCGCCCTTCCTAGCTGTGGACGGAAGAATCCTCGCATT
GATGACGGACTTGGAATACCATGTTATTGGGGCAAGTGTAGACACAAAGG
ACTTTGAGAATAATACGCCTCAGTTAATAGGGGAGAGTGTGAGGAAGTTT
GTGGAGGGGGTGCAGGCGGGCGGGACGGTGGTGTTGGCACATGATACGCA
TGCGCAGACGGTTTGGACTTTGACTAGGGTTATGTTGGAGGAGAGTAGGA
GGAGGGGGTTGATTGGTAGGTTTACCCCTCCTTGAATGACCAAGCTCCTA
GCAATCACCCTCATCCTCACCATCCTCTCCCTGCTTCCAACCTGCTACAG
CCACCCCATCAACGAAACCTCCCACTCCTCAGCCGTCCCCTACGGCATGC
TAATCACCCACTGCACCGTCCCCAACACCATCGCCCTAACCTTCGACGAC
GGCCCCTCAACCTTCACCCCAGCCCTTCTGGACCTCCTCAGCGAATACGG
GGCACGCTCAACCTTCTTCGTGAACGGCTACCGACTACAGGAGAGTGCTC
CCATCCTACAACGCATCTACACTGAAGGGCACCAAATAGCCTCTCACACA
TTTGGCCACTCCTTCCTCCCTACCCTCGACAACCCCACCATAATTAACGA
GATGAACACCCTCGAGTCCTTATTCCGGACCTTCATCGGTCGAGTCCCCA
CCTATATGCGCCCGCCCTTCCTAGCTGTGGACGGAAGAATCCTCGCATTG
ATGACGGACTTGGAATACCATGTTATTGGGGCAAGTGTAGACACAAAGGA
CTTTGAGAATAATACGCCTCAGTTAATAGGGGAGAGTGTGAGGAAGTTTG
TGGAGGGGGTGCAGGCGGGCGGGACGGTGGTGTTGGCACATGATACGCAT
GCGCAGACGGTTTGGACTTTGACTAGGGTTATGTTGGAGGAGAGTAGGAG
GAGGGGGTTGATTGGTAGGTTTACCCCTCCTTGAATGACCAAGCTCCTAG
CAATCACCCTCATCCTCACCATCCTCTCCCTGCTTCCAACCTGCTACAGC
CACCCCATCAACGAAACCTCCCACTCCTCAGCCGTCCCCTACGGCATGCT
AATCACCCACTGCACCGTCCCCAACACCATCGCCCTAACCTTCGACGACG
GCCCCTCAACCTTCACCCCAGCCCTTCTGGACCTCCTCAGCGAATACGGG
GCACGCTCAACCTTCTTCGTGAACGGCTACCGACTACAGGAGAGTGCTCC
CATCCTACAACGCATCTACACTGAAGGGCACCAAATAGCCTCTCACAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6625CAN33_6625Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6625-T1CAN33_6625-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6625-T1.cdsCAN33_6625-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6625-T1.exon2CAN33_6625-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_6625-T1.exon1CAN33_6625-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:CE4
DBxrefInterPro:IPR011330
DBxrefInterPro:IPR002509
DBxrefPFAM:PF01522
ProductPolysaccharide deacetylase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1822999..1823777 -
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