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CAN33_6770-T1, CAN33_6770-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6770-T1
Unique NameCAN33_6770-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1907278..1908775+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6770-T1 ID=CAN33_6770-T1|Name=CAN33_6770-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1498bp|location=Sequence derived from alignment at NKJJ01000019.1:1907278..1908775+ (Aspergillus niger FDAARGOS_311)
ATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCGAC
CTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGCGC
CTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTCAG
GCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGATGA
AGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTATG
AGGGCCGATTGTATGTTACACCCATCCTGTGCCTGGCTCCAATTAACGGT
AGACAGCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGGGATC
TGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGCATCA
GTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCTCCGT
CTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACCTCGT
ACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCACACCT
GTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGTCGTC
AAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAGCCGG
TCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCCCGGG
CATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCACACAT
ATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATCCGCC
GAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGCTGTC
GGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCCCAGC
ATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTGCGGT
GGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCGGATT
CGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCGGTCA
GCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCGCTAA
TTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATGGCCG
AATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAACTTCG
AGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACCGGTC
GTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGATCAAC
GCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGATGTA
TTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAACCCG
AGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCGCAAG
CGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCTAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1907278..1908775+

>CAN33_6770-T1 ID=CAN33_6770-T1|Name=CAN33_6770-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2904bp|location=Sequence derived from alignment at NKJJ01000019.1:1907278..1908775+ (Aspergillus niger FDAARGOS_311)
ATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCGAC
CTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGCGC
CTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTCAG
GCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGATGA
AGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTATG
AGGGCCGATTCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGG
GATCTGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGC
ATCAGTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCT
CCGTCTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACC
TCGTACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCAC
ACCTGTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGT
CGTCAAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAG
CCGGTCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCC
CGGGCATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCAC
ACATATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATC
CGCCGAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGC
TGTCGGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCC
CAGCATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTG
CGGTGGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCG
GATTCGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCG
GTCAGCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCG
CTAATTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATG
GCCGAATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAAC
TTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACC
GGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGAT
CAACGCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGA
TGTATTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAA
CCCGAGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCG
CAAGCGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCT
AAATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCG
ACCTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGC
GCCTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTC
AGGCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGAT
GAAGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTA
TGAGGGCCGATTCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCT
GGGATCTGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTG
GCATCAGTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTAC
CTCCGTCTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAA
CCTCGTACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATC
ACACCTGTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTT
GTCGTCAAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGA
AGCCGGTCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTC
CCCGGGCATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCC
ACACATATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATA
TCCGCCGAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGAT
GCTGTCGGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCG
CCCAGCATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCG
TGCGGTGGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCT
CGGATTCGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTT
CGGTCAGCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCAC
CGCTAATTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTA
TGGCCGAATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGA
ACTTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGA
CCGGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGG
ATCAACGCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGA
GATGTATTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGG
AACCCGAGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGAC
CGCAAGCGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGG
CTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6770CAN33_6770Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6770-T1.exon1CAN33_6770-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_6770-T1.exon2CAN33_6770-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6770-T1.cdsCAN33_6770-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6770-T1CAN33_6770-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1907278..1908775 +
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