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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:1974233..1975369+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_6840-T1 ID=CAN33_6840-T1|Name=CAN33_6840-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1137bp|location=Sequence derived from alignment at NKJJ01000019.1:1974233..1975369+ (Aspergillus niger FDAARGOS_311)
ATGAACCTCACGCGGCTGCAAGCCCTGGAAAGAATTGATCCCAGACTACT
AGCACCTTGGCGAGCCCAATCATTCACTGACATTGAAATTGAGCTGGATC
GGGAGAAAGCACAGACTAATGCTCTAGCGAGAGCGGCCACACCCAATATT
ACAGTCTTTTCGGATGCCTCGGGCAAAGAGAATCAGCTAGGAGCCGCAGC
GGTGGCTCTCGACCACAACCAACAGATCGTAGGGTCTCGACAAGTCAGCA
TTGGTTCGATGGAGTTCTGGTCCGTCTACGCAGCTGAGCTAATGGCGATC
TACTACGCGATCGGGCTGGTTTTTCAGCTCGCGCAGAAGAACCAGAGATC
CAGAGCAACAGATGCAGAGCCAGCGACAATCCTTAGTGACAGCATGTCGG
CCCTGCAGGTTATCAAAAACTCCTGGAACAAATCAGGCCAGCGTATCATT
CAGGCGATTCACCAGTCGGCCGGGGAGCTCAGGGCGCGGGGGATCCCACT
GCGACTACAATGGGTTCCGGGTCACTGCGGCAACCCTGGAAACGAAGCAG
CAGACCGCCTAGCCAAAGCCACGGTAGGGGGTGAAAAGAGACACCCCTTT
AGACATCTTCTGTCACGAGAGAAAAGGTACATCCGCAAGAATATTAGCGA
CGAATGGCACCAAGAATGGAGGGCCTCTCGAAACGGAGGACATCTCCGCC
GCATTGACCGGGCCCTACCGGCCAACCGGACCCGCCGGCTCTACGGCTCG
CTCCCCCGAAATCGAGCCTACTTACTCACCCAACTCCGGACTGGCCACTC
ATGGCTGGCGACACACGGAAAACAGCGCGGGCTCCGAGACGATGAGAAAT
GTGAATATGGGGCAACGGAAACCGTGGTCCACGTGTTAATCGATTGCCCG
CGGCTTAGTGGGCTACGCCAAGCCCTCCGACGGAAGATTGGAGGGGCATT
CAACAATATTTCCGATATGCTGGGAGGAGCAGGACAAGGTAGGGAGGGTA
GGTTCCAAGATGGTCCGCAAGACAGTAGCGTCCTCGGGGCGGTCCTGGAC
TTTGCGGAGGCATCGCAGAGATTCCGAAGTCGCGCGCCACGAGGGCGGCA
AAACACAACCCCAGGCACTGGCCACCACAGGCCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:1974233..1975369+ >CAN33_6840-T1 ID=CAN33_6840-T1|Name=CAN33_6840-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1137bp|location=Sequence derived from alignment at NKJJ01000019.1:1974233..1975369+ (Aspergillus niger FDAARGOS_311)
ATGAACCTCACGCGGCTGCAAGCCCTGGAAAGAATTGATCCCAGACTACT
AGCACCTTGGCGAGCCCAATCATTCACTGACATTGAAATTGAGCTGGATC
GGGAGAAAGCACAGACTAATGCTCTAGCGAGAGCGGCCACACCCAATATT
ACAGTCTTTTCGGATGCCTCGGGCAAAGAGAATCAGCTAGGAGCCGCAGC
GGTGGCTCTCGACCACAACCAACAGATCGTAGGGTCTCGACAAGTCAGCA
TTGGTTCGATGGAGTTCTGGTCCGTCTACGCAGCTGAGCTAATGGCGATC
TACTACGCGATCGGGCTGGTTTTTCAGCTCGCGCAGAAGAACCAGAGATC
CAGAGCAACAGATGCAGAGCCAGCGACAATCCTTAGTGACAGCATGTCGG
CCCTGCAGGTTATCAAAAACTCCTGGAACAAATCAGGCCAGCGTATCATT
CAGGCGATTCACCAGTCGGCCGGGGAGCTCAGGGCGCGGGGGATCCCACT
GCGACTACAATGGGTTCCGGGTCACTGCGGCAACCCTGGAAACGAAGCAG
CAGACCGCCTAGCCAAAGCCACGGTAGGGGGTGAAAAGAGACACCCCTTT
AGACATCTTCTGTCACGAGAGAAAAGGTACATCCGCAAGAATATTAGCGA
CGAATGGCACCAAGAATGGAGGGCCTCTCGAAACGGAGGACATCTCCGCC
GCATTGACCGGGCCCTACCGGCCAACCGGACCCGCCGGCTCTACGGCTCG
CTCCCCCGAAATCGAGCCTACTTACTCACCCAACTCCGGACTGGCCACTC
ATGGCTGGCGACACACGGAAAACAGCGCGGGCTCCGAGACGATGAGAAAT
GTGAATATGGGGCAACGGAAACCGTGGTCCACGTGTTAATCGATTGCCCG
CGGCTTAGTGGGCTACGCCAAGCCCTCCGACGGAAGATTGGAGGGGCATT
CAACAATATTTCCGATATGCTGGGAGGAGCAGGACAAGGTAGGGAGGGTA
GGTTCCAAGATGGTCCGCAAGACAGTAGCGTCCTCGGGGCGGTCCTGGAC
TTTGCGGAGGCATCGCAGAGATTCCGAAGTCGCGCGCCACGAGGGCGGCA
AAACACAACCCCAGGCACTGGCCACCACAGGCCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0004523 | RNA-DNA hybrid ribonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR002156 |
| DBxref | PFAM:PF00075 |
| Product | RNase H family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:1974233..1975369 + |
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