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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:2013818..2015230- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_6895-T1 ID=CAN33_6895-T1|Name=CAN33_6895-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1413bp|location=Sequence derived from alignment at NKJJ01000019.1:2013818..2015230- (Aspergillus niger FDAARGOS_311)
ATGGGCCAAGATCACTGCGACCACGATCCTATGCAGACTTCTTTCACAAC
TGACGTATGCTCGCACTTAGCTGCTTATGAAGACCATCGGGCAGCCGCCA
CACAGCCCTCTCAAGACAATGATGCCGACATTGACGCCGGACTAGGATAT
AATCTCATGTATTTGCTATACTGGGCACTATCGGGAGACCAACTGAGAGC
GACTGAGGGACTTTCTGAGGGCCTGGAGATTGACATAGATTGTTGTGATC
GCTTCGGATATGCTCCTCTTACGCTGGCAGCTTACAGGGGCTCTTGCCAT
GTTGCTAGGAATCTGCTTGCGTCCGAAGCAGAGTTCAATGCGCAAGACAC
CAACGGGTTGACCGCGCTTCATATAGCGGCTTGCGAAGGAGATATGCTGG
TTGTGGAGCTGCTCCTGCAACATCCTGAGGTTGATGTCAACGCGCAAGAC
ACTGACGGGTTGACTGCGCTTCATATAGCGGCAGGCGAAGGGCATATGCC
GGTTGTGGAGCTGCTCCTGCAACATCCTCGGGTTGATGTCAATGTGCAAG
ACACTGACGGGTTGACTGCGCTTCATATAGCGGCAGGCGAAGGGCATATG
CCGGTTGTGGAGCTGCTCCTGCAACATCCTCGGGTTGATGTCAATGTGCA
AGACACCGACGGGCTGACCGCGCTTCATATAGCAGCAGGCGAAGAATATT
CGCCTATTGTGGAACTGCTCCTTCAAAAACCTAAGCTTGATGTCAATACC
CAAGACATCGAAGGGTTAGCCGCACTTCATGATGCGGCATATGAAGGACG
TTTGCTAAGTCTGAAGCTGCTCCTGCAACACACAGGAATCATTGTTAATA
AACAGGACAAGTGCGGGTTAACCGCGCTTCATAAAGCGGCAAATAAAGGA
CATCTGCCAACTGTCGAGCTGCTCCTGCAACATCCTGAGATGGACGTCAA
TGTGCGAGACACTCGAGGACGTACGCCACTGTGGTGGGTGGTTGTGCACC
AACCCGAAGTTGCAAGCCGGCTGCTTGACGATACCAGGATCGCTGTGAAT
ATCATGGATGGACAGGGTTCATCATACCTCCACCTTGCGGTGCAGACCAG
CAATAATTCGCTTGTCAATAAGTTATTGGCGAGGTACGACATAGATCCGA
ATTTAGAAGATGAAAGCGGTCGGACTGCTCTCTCATATGCAAAAGAAAAT
GGAGATATCTCGATATGGTGCTGCCTCCTGGGCGACCCTCGGCTGAACAC
TAATAACAACTGCGACCATGTTCCTTCCCGTCTGATACAATGCCAGCGTC
ACAGAATCAACGCGCCTGGCAGAAAAAAGAAAAAGATCCTTGGACTGCTG
GTGACGCCGTACTTGTTCATTGTTATCCGCCGTCTTTGCTCTAGATTTTG
TATCTTGGAATAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:2013818..2015230- >CAN33_6895-T1 ID=CAN33_6895-T1|Name=CAN33_6895-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1413bp|location=Sequence derived from alignment at NKJJ01000019.1:2013818..2015230- (Aspergillus niger FDAARGOS_311)
ATGGGCCAAGATCACTGCGACCACGATCCTATGCAGACTTCTTTCACAAC
TGACGTATGCTCGCACTTAGCTGCTTATGAAGACCATCGGGCAGCCGCCA
CACAGCCCTCTCAAGACAATGATGCCGACATTGACGCCGGACTAGGATAT
AATCTCATGTATTTGCTATACTGGGCACTATCGGGAGACCAACTGAGAGC
GACTGAGGGACTTTCTGAGGGCCTGGAGATTGACATAGATTGTTGTGATC
GCTTCGGATATGCTCCTCTTACGCTGGCAGCTTACAGGGGCTCTTGCCAT
GTTGCTAGGAATCTGCTTGCGTCCGAAGCAGAGTTCAATGCGCAAGACAC
CAACGGGTTGACCGCGCTTCATATAGCGGCTTGCGAAGGAGATATGCTGG
TTGTGGAGCTGCTCCTGCAACATCCTGAGGTTGATGTCAACGCGCAAGAC
ACTGACGGGTTGACTGCGCTTCATATAGCGGCAGGCGAAGGGCATATGCC
GGTTGTGGAGCTGCTCCTGCAACATCCTCGGGTTGATGTCAATGTGCAAG
ACACTGACGGGTTGACTGCGCTTCATATAGCGGCAGGCGAAGGGCATATG
CCGGTTGTGGAGCTGCTCCTGCAACATCCTCGGGTTGATGTCAATGTGCA
AGACACCGACGGGCTGACCGCGCTTCATATAGCAGCAGGCGAAGAATATT
CGCCTATTGTGGAACTGCTCCTTCAAAAACCTAAGCTTGATGTCAATACC
CAAGACATCGAAGGGTTAGCCGCACTTCATGATGCGGCATATGAAGGACG
TTTGCTAAGTCTGAAGCTGCTCCTGCAACACACAGGAATCATTGTTAATA
AACAGGACAAGTGCGGGTTAACCGCGCTTCATAAAGCGGCAAATAAAGGA
CATCTGCCAACTGTCGAGCTGCTCCTGCAACATCCTGAGATGGACGTCAA
TGTGCGAGACACTCGAGGACGTACGCCACTGTGGTGGGTGGTTGTGCACC
AACCCGAAGTTGCAAGCCGGCTGCTTGACGATACCAGGATCGCTGTGAAT
ATCATGGATGGACAGGGTTCATCATACCTCCACCTTGCGGTGCAGACCAG
CAATAATTCGCTTGTCAATAAGTTATTGGCGAGGTACGACATAGATCCGA
ATTTAGAAGATGAAAGCGGTCGGACTGCTCTCTCATATGCAAAAGAAAAT
GGAGATATCTCGATATGGTGCTGCCTCCTGGGCGACCCTCGGCTGAACAC
TAATAACAACTGCGACCATGTTCCTTCCCGTCTGATACAATGCCAGCGTC
ACAGAATCAACGCGCCTGGCAGAAAAAAGAAAAAGATCCTTGGACTGCTG
GTGACGCCGTACTTGTTCATTGTTATCCGCCGTCTTTGCTCTAGATTTTG
TATCTTGGAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:2013818..2015230 - |
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