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CAN33_6940-T1, CAN33_6940-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_6940-T1
Unique NameCAN33_6940-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:2056445..2056845-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_6940-T1 ID=CAN33_6940-T1|Name=CAN33_6940-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=401bp|location=Sequence derived from alignment at NKJJ01000019.1:2056445..2056845- (Aspergillus niger FDAARGOS_311)
ATGTCTCGGATCGCTCCCTTCAAGAAACGGCGTCGATCGGAAAGCTCTAA
AGCCAAAACCCAGCAGAGAAGTAAACTGAAGAAGACGTTGATCAGAAAAG
CCGCCCAGTACAGTATTGAATGTGACTCCGATGTATTCGTTATGATACGA
GTCAAGGGAAGCGGCCGAAGGTATATCTTCAATTCTTCTCCATCGGAGAA
TTGGCTTCCGTCCATGCCAGAGCTGGTAAGTCGCGGGCTTTGCGACACAA
TTACCGAATTTAACGAGTATAGAGTGGATACTATCCAACGCCGATGATTA
AGACTCTGGAAGATGTTGTTCCCCAATACAAGCATTGCCCTGAACCAGAT
CAGGAAGAAGTCGGGACACGTGTAATTCCATCGGTGAAGAAGGCTGTGTA
G
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Coding sequence (CDS) from alignment at NKJJ01000019.1:2056445..2056845-

>CAN33_6940-T1 ID=CAN33_6940-T1|Name=CAN33_6940-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=708bp|location=Sequence derived from alignment at NKJJ01000019.1:2056445..2056845- (Aspergillus niger FDAARGOS_311)
AGTGGATACTATCCAACGCCGATGATTAAGACTCTGGAAGATGTTGTTCC
CCAATACAAGCATTGCCCTGAACCAGATCAGGAAGAAGTCGGGACACGTG
TAATTCCATCGGTGAAGAAGGCTGTGTAGATGTCTCGGATCGCTCCCTTC
AAGAAACGGCGTCGATCGGAAAGCTCTAAAGCCAAAACCCAGCAGAGAAG
TAAACTGAAGAAGACGTTGATCAGAAAAGCCGCCCAGTACAGTATTGAAT
GTGACTCCGATGTATTCGTTATGATACGAGTCAAGGGAAGCGGCCGAAGG
TATATCTTCAATTCTTCTCCATCGGAGAATTGGCTTCCGTCCATGCCAGA
GCTGAGTGGATACTATCCAACGCCGATGATTAAGACTCTGGAAGATGTTG
TTCCCCAATACAAGCATTGCCCTGAACCAGATCAGGAAGAAGTCGGGACA
CGTGTAATTCCATCGGTGAAGAAGGCTGTGTAGATGTCTCGGATCGCTCC
CTTCAAGAAACGGCGTCGATCGGAAAGCTCTAAAGCCAAAACCCAGCAGA
GAAGTAAACTGAAGAAGACGTTGATCAGAAAAGCCGCCCAGTACAGTATT
GAATGTGACTCCGATGTATTCGTTATGATACGAGTCAAGGGAAGCGGCCG
AAGGTATATCTTCAATTCTTCTCCATCGGAGAATTGGCTTCCGTCCATGC
CAGAGCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_6940CAN33_6940Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6940-T1CAN33_6940-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6940-T1.cdsCAN33_6940-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_6940-T1.exon2CAN33_6940-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_6940-T1.exon1CAN33_6940-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036879
DBxrefInterPro:IPR002100
DBxrefPFAM:PF00319
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:2056445..2056845 -
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